RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 NRXN1Q9ULB1 1477 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 LTKP29376 864 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 TMF1P82094 1093 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 ILDR2Q71H61 639 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 KDM2AQ9Y2K7 1162 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 NEXMIFQ5QGS0 1516 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 KIAA1210Q9ULL0 1709 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 GPRASP1Q5JY77 1395 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 SBNO2Q9Y2G9 1366 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 HMGB2P26583 209 aaKnown RBP4.95□□□□□ -1.62
PTPN22-211ENST00000538253 EIF4G2P78344 907 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTPN22-211ENST00000538253 NWD1Q149M9 1564 aa4.95□□□□□ -1.62
PTPN22-211ENST00000538253 UBAP1LF5GYI3 381 aa4.94□□□□□ -1.62
PTPN22-211ENST00000538253 L3MBTL2Q969R5 705 aa4.94□□□□□ -1.62
PTPN22-211ENST00000538253 YTHDC2Q9H6S0 1430 aaKnown RBP4.94□□□□□ -1.62
PTPN22-211ENST00000538253 ADGRL3Q9HAR2 1447 aa4.94□□□□□ -1.62
PTPN22-211ENST00000538253 SLC26A8Q96RN1 970 aa4.94□□□□□ -1.62
PTPN22-211ENST00000538253 ZNF692Q9BU19 519 aaPredicted RBP4.94□□□□□ -1.62
PTPN22-211ENST00000538253 DISP3Q9P2K9 1392 aa4.94□□□□□ -1.62
PTPN22-211ENST00000538253 PDE4CQ08493 712 aa4.94□□□□□ -1.62
PTPN22-211ENST00000538253 HDGFL2Q7Z4V5 671 aaPredicted RBP4.94□□□□□ -1.62
PTPN22-211ENST00000538253 TERF2IPQ9NYB0 399 aa4.94□□□□□ -1.62
PTPN22-211ENST00000538253 RALGAPBQ86X10 1494 aa4.94□□□□□ -1.62
PTPN22-211ENST00000538253 NPHP3Q7Z494 1330 aa4.94□□□□□ -1.62
PTPN22-211ENST00000538253 SIGLEC1Q9BZZ2 1709 aa4.93□□□□□ -1.62
PTPN22-211ENST00000538253 ADAMTS13Q76LX8 1427 aa4.93□□□□□ -1.62
PTPN22-211ENST00000538253 AMER1Q5JTC6 1135 aaPredicted RBP4.93□□□□□ -1.62
PTPN22-211ENST00000538253 TMEM94Q12767 1356 aa4.93□□□□□ -1.62
PTPN22-211ENST00000538253 ALKQ9UM73 1620 aa4.92□□□□□ -1.62
PTPN22-211ENST00000538253 ADGRF5Q8IZF2 1346 aa4.92□□□□□ -1.62
PTPN22-211ENST00000538253 LRRC59Q96AG4 307 aaKnown RBP4.91□□□□□ -1.62
PTPN22-211ENST00000538253 ARHGEF10O15013 1369 aa4.91□□□□□ -1.62
PTPN22-211ENST00000538253 MAPK8IP2Q13387 824 aaPredicted RBP4.91□□□□□ -1.62
PTPN22-211ENST00000538253 CFAP70Q5T0N1 1121 aa4.91□□□□□ -1.62
PTPN22-211ENST00000538253 PPLO60437 1756 aa4.91□□□□□ -1.62
PTPN22-211ENST00000538253 STK26Q9P289 416 aa4.91□□□□□ -1.62
PTPN22-211ENST00000538253 CCDC61Q9Y6R9 512 aa4.91□□□□□ -1.62
PTPN22-211ENST00000538253 ZNF335Q9H4Z2 1342 aaPredicted RBP4.9□□□□□ -1.62
PTPN22-211ENST00000538253 C11orf95C9JLR9 678 aaPredicted RBP4.9□□□□□ -1.62
PTPN22-211ENST00000538253 WASLO00401 505 aaPredicted RBP4.9□□□□□ -1.62
PTPN22-211ENST00000538253 SRPK2P78362 688 aaKnown RBP4.9□□□□□ -1.62
PTPN22-211ENST00000538253 HAP1P54257 671 aaPredicted RBP4.9□□□□□ -1.62
PTPN22-211ENST00000538253 NGDNQ8NEJ9 315 aaKnown RBP4.9□□□□□ -1.62
PTPN22-211ENST00000538253 SLAIN2Q9P270 581 aa4.9□□□□□ -1.62
PTPN22-211ENST00000538253 CDC42BPGQ6DT37 1551 aa4.9□□□□□ -1.63
PTPN22-211ENST00000538253 LRRC7Q96NW7 1537 aa4.9□□□□□ -1.63
PTPN22-211ENST00000538253 KNDC1Q76NI1 1749 aa4.9□□□□□ -1.63
PTPN22-211ENST00000538253 SPATA31A6Q5VVP1 1343 aa4.9□□□□□ -1.63
PTPN22-211ENST00000538253 TTC21AQ8NDW8 1320 aa4.9□□□□□ -1.63
PTPN22-211ENST00000538253 PRAM1Q96QH2 718 aa4.9□□□□□ -1.63
PTPN22-211ENST00000538253 TRAK1Q9UPV9 953 aa4.9□□□□□ -1.63
PTPN22-211ENST00000538253 KCNA4P22459 653 aa4.89□□□□□ -1.63
PTPN22-211ENST00000538253 SIN3AQ96ST3 1273 aa4.89□□□□□ -1.63
PTPN22-211ENST00000538253 PHF8Q9UPP1 1060 aa4.89□□□□□ -1.63
PTPN22-211ENST00000538253 JCADQ9P266 1359 aa4.89□□□□□ -1.63
PTPN22-211ENST00000538253 NEFLP07196 543 aa4.89□□□□□ -1.63
PTPN22-211ENST00000538253 SBNO1A3KN83 1393 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 METP08581 1390 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 NUTM2DQ5VT03 806 aaPredicted RBP4.88□□□□□ -1.63
PTPN22-211ENST00000538253 KCNH5Q8NCM2 988 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 TAOK2Q9UL54 1235 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 USP47Q96K76 1375 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 LTBP4Q8N2S1 1624 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 XRN1Q8IZH2 1706 aaKnown RBP4.88□□□□□ -1.63
PTPN22-211ENST00000538253 PLEKHG3A1L390 1219 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 NLRP13Q86W25 1043 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 CFAP65Q6ZU64 1925 aaKnown RBP4.88□□□□□ -1.63
PTPN22-211ENST00000538253 CGNL1Q0VF96 1302 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 KIF1AQ12756 1690 aa4.88□□□□□ -1.63
PTPN22-211ENST00000538253 BCL11BQ9C0K0 894 aaPredicted RBP4.88□□□□□ -1.63
PTPN22-211ENST00000538253 NSD2O96028 1365 aa4.87□□□□□ -1.63
PTPN22-211ENST00000538253 IFT172Q9UG01 1749 aa4.87□□□□□ -1.63
PTPN22-211ENST00000538253 ATP7BP35670 1465 aa4.87□□□□□ -1.63
PTPN22-211ENST00000538253 ADGRB2O60241 1585 aa4.87□□□□□ -1.63
PTPN22-211ENST00000538253 WASHC2AQ641Q2 1341 aa4.87□□□□□ -1.63
PTPN22-211ENST00000538253 TULP4Q9NRJ4 1543 aa4.87□□□□□ -1.63
PTPN22-211ENST00000538253 NPM2Q86SE8 214 aaKnown RBP4.87□□□□□ -1.63
PTPN22-211ENST00000538253 STRCQ7RTU9 1775 aa4.87□□□□□ -1.63
PTPN22-211ENST00000538253 ESCO1Q5FWF5 840 aa4.87□□□□□ -1.63
PTPN22-211ENST00000538253 MEX3CQ5U5Q3 659 aaKnown RBP4.86□□□□□ -1.63
PTPN22-211ENST00000538253 NUDT16Q96DE0 195 aaKnown RBP4.86□□□□□ -1.63
PTPN22-211ENST00000538253 CDK19Q9BWU1 502 aa4.86□□□□□ -1.63
PTPN22-211ENST00000538253 SALL2Q9Y467 1007 aaPredicted RBP4.86□□□□□ -1.63
PTPN22-211ENST00000538253 CHD2O14647 1828 aaKnown RBP4.86□□□□□ -1.63
PTPN22-211ENST00000538253 MINK1Q8N4C8 1332 aaPredicted RBP4.86□□□□□ -1.63
PTPN22-211ENST00000538253 ROBO2Q9HCK4 1378 aa4.86□□□□□ -1.63
PTPN22-211ENST00000538253 TMEM132EQ6IEE7 984 aa4.86□□□□□ -1.63
PTPN22-211ENST00000538253 CCDC136Q96JN2 1154 aa4.86□□□□□ -1.63
PTPN22-211ENST00000538253 GTF3C3Q9Y5Q9 886 aa4.86□□□□□ -1.63
PTPN22-211ENST00000538253 C1orf167Q5SNV9 1468 aa4.86□□□□□ -1.63
PTPN22-211ENST00000538253 ZNF772Q68DY9 489 aaPredicted RBP4.85□□□□□ -1.63
PTPN22-211ENST00000538253 ADGRB1O14514 1584 aa4.85□□□□□ -1.63
PTPN22-211ENST00000538253 KTN1Q86UP2 1357 aaKnown RBP4.85□□□□□ -1.63
PTPN22-211ENST00000538253 NEFMP07197 916 aa4.85□□□□□ -1.63
PTPN22-211ENST00000538253 PIP4K2BP78356 416 aa4.85□□□□□ -1.63
PTPN22-211ENST00000538253 KRT28Q7Z3Y7 464 aa4.85□□□□□ -1.63
PTPN22-211ENST00000538253 PNNQ9H307 717 aaKnown RBP4.85□□□□□ -1.63
PTPN22-211ENST00000538253 KNSTRNQ9Y448 316 aa4.85□□□□□ -1.63
PTPN22-211ENST00000538253 MST1RQ04912 1400 aa4.85□□□□□ -1.63
PTPN22-211ENST00000538253 PTPRUQ92729 1446 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms