RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 FAM98CQ17RN3 349 aaKnown RBP9.57□□□□□ -0.88
MSH6-209ENST00000538136 KIF7Q2M1P5 1343 aa9.57□□□□□ -0.88
MSH6-209ENST00000538136 MLH3Q9UHC1 1453 aa9.57□□□□□ -0.88
MSH6-209ENST00000538136 KTN1Q86UP2 1357 aaKnown RBP9.57□□□□□ -0.88
MSH6-209ENST00000538136 ILDR1Q86SU0 546 aaPredicted RBP9.57□□□□□ -0.88
MSH6-209ENST00000538136 MYO5CQ9NQX4 1742 aa9.57□□□□□ -0.88
MSH6-209ENST00000538136 RBM42Q9BTD8 480 aaKnown RBP9.57□□□□□ -0.88
MSH6-209ENST00000538136 ABCC1P33527 1531 aa9.57□□□□□ -0.88
MSH6-209ENST00000538136 CNTLNQ9NXG0 1405 aa9.57□□□□□ -0.88
MSH6-209ENST00000538136 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
MSH6-209ENST00000538136 PTCD1O75127 700 aaKnown RBP9.56□□□□□ -0.88
MSH6-209ENST00000538136 EIF2S2P20042 333 aaKnown RBP9.56□□□□□ -0.88
MSH6-209ENST00000538136 SULT6B1Q6IMI4 303 aa9.55□□□□□ -0.88
MSH6-209ENST00000538136 MPRIPQ6WCQ1 1025 aa9.55□□□□□ -0.88
MSH6-209ENST00000538136 FRAT1Q92837 279 aaPredicted RBP9.55□□□□□ -0.88
MSH6-209ENST00000538136 NPHP4O75161 1426 aaPredicted RBP9.54□□□□□ -0.88
MSH6-209ENST00000538136 CENPBP07199 599 aaPredicted RBP9.54□□□□□ -0.88
MSH6-209ENST00000538136 HSP90AB2PQ58FF8 381 aa9.54□□□□□ -0.88
MSH6-209ENST00000538136 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.54□□□□□ -0.88
MSH6-209ENST00000538136 NPHP3Q7Z494 1330 aa9.54□□□□□ -0.88
MSH6-209ENST00000538136 RTL5Q5HYW3 569 aaPredicted RBP9.54□□□□□ -0.88
MSH6-209ENST00000538136 BCL2L13Q9BXK5 485 aa9.54□□□□□ -0.88
MSH6-209ENST00000538136 WASHC2AQ641Q2 1341 aa9.54□□□□□ -0.88
MSH6-209ENST00000538136 MIS18AQ9NYP9 233 aa9.53□□□□□ -0.88
MSH6-209ENST00000538136 KCNQ4P56696 695 aa9.53□□□□□ -0.88
MSH6-209ENST00000538136 MAP3K1Q13233 1512 aa9.53□□□□□ -0.88
MSH6-209ENST00000538136 USP21Q9UK80 565 aa9.53□□□□□ -0.88
MSH6-209ENST00000538136 THUMPD2Q9BTF0 503 aaKnown RBP9.52□□□□□ -0.88
MSH6-209ENST00000538136 DCTN1Q14203 1278 aa9.52□□□□□ -0.89
MSH6-209ENST00000538136 C1orf141Q5JVX7 400 aa9.52□□□□□ -0.89
MSH6-209ENST00000538136 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.89
MSH6-209ENST00000538136 TEFQ10587 303 aa9.52□□□□□ -0.89
MSH6-209ENST00000538136 TIMELESSQ9UNS1 1208 aa9.52□□□□□ -0.89
MSH6-209ENST00000538136 BRINP3Q76B58 766 aa9.51□□□□□ -0.89
MSH6-209ENST00000538136 ITSN2Q9NZM3 1697 aa9.51□□□□□ -0.89
MSH6-209ENST00000538136 GCP02774 474 aa9.51□□□□□ -0.89
MSH6-209ENST00000538136 QTRT2Q9H974 415 aaKnown RBP9.51□□□□□ -0.89
MSH6-209ENST00000538136 ROBO2Q9HCK4 1378 aa9.51□□□□□ -0.89
MSH6-209ENST00000538136 HECW2Q9P2P5 1572 aa9.51□□□□□ -0.89
MSH6-209ENST00000538136 MAGI2Q86UL8 1455 aa9.51□□□□□ -0.89
MSH6-209ENST00000538136 GTF2E1P29083 439 aaPredicted RBP9.51□□□□□ -0.89
MSH6-209ENST00000538136 DIAPH1O60610 1272 aaKnown RBP9.5□□□□□ -0.89
MSH6-209ENST00000538136 APAF1O14727 1248 aa9.5□□□□□ -0.89
MSH6-209ENST00000538136 PZPP20742 1482 aa9.5□□□□□ -0.89
MSH6-209ENST00000538136 ARAP3Q8WWN8 1544 aa9.5□□□□□ -0.89
MSH6-209ENST00000538136 AIMP1Q12904 312 aaKnown RBP9.49□□□□□ -0.89
MSH6-209ENST00000538136 CCDC184Q52MB2 194 aa9.49□□□□□ -0.89
MSH6-209ENST00000538136 ABCA9Q8IUA7 1624 aa9.49□□□□□ -0.89
MSH6-209ENST00000538136 PRDM15P57071 1507 aaPredicted RBP9.49□□□□□ -0.89
MSH6-209ENST00000538136 CDC42BPAQ5VT25 1732 aa9.48□□□□□ -0.89
MSH6-209ENST00000538136 APBB1O00213 710 aa9.48□□□□□ -0.89
MSH6-209ENST00000538136 BICDL1Q6ZP65 573 aa9.48□□□□□ -0.89
MSH6-209ENST00000538136 BCL11BQ9C0K0 894 aaPredicted RBP9.48□□□□□ -0.89
MSH6-209ENST00000538136 TCOF1Q13428 1488 aaKnown RBP9.48□□□□□ -0.89
MSH6-209ENST00000538136 PIP4K2AP48426 406 aaPredicted RBP9.48□□□□□ -0.89
MSH6-209ENST00000538136 ZNF692Q9BU19 519 aaPredicted RBP9.48□□□□□ -0.89
MSH6-209ENST00000538136 PRKAR2BP31323 418 aa9.48□□□□□ -0.89
MSH6-209ENST00000538136 ZNF530Q6P9A1 599 aaPredicted RBP9.48□□□□□ -0.89
MSH6-209ENST00000538136 CLUAP1Q96AJ1 413 aa9.48□□□□□ -0.89
MSH6-209ENST00000538136 PHF14O94880 888 aa9.47□□□□□ -0.89
MSH6-209ENST00000538136 ERVK-7P63135 1459 aa9.47□□□□□ -0.89
MSH6-209ENST00000538136 CDC42BPBQ9Y5S2 1711 aa9.47□□□□□ -0.89
MSH6-209ENST00000538136 SCAF11Q99590 1463 aaKnown RBP9.47□□□□□ -0.89
MSH6-209ENST00000538136 SLC4A10Q6U841 1118 aa9.47□□□□□ -0.89
MSH6-209ENST00000538136 PREX2Q70Z35 1606 aa9.47□□□□□ -0.89
MSH6-209ENST00000538136 YTHDC2Q9H6S0 1430 aaKnown RBP9.47□□□□□ -0.89
MSH6-209ENST00000538136 AEBP1Q8IUX7 1158 aa9.46□□□□□ -0.89
MSH6-209ENST00000538136 ANKRD24Q8TF21 1146 aa9.46□□□□□ -0.89
MSH6-209ENST00000538136 EXOC5O00471 708 aa9.46□□□□□ -0.89
MSH6-209ENST00000538136 TTC21BQ7Z4L5 1316 aa9.46□□□□□ -0.9
MSH6-209ENST00000538136 TATP17735 454 aaPredicted RBP9.46□□□□□ -0.9
MSH6-209ENST00000538136 LARP1Q6PKG0 1096 aaKnown RBP9.46□□□□□ -0.9
MSH6-209ENST00000538136 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.9
MSH6-209ENST00000538136 RIMS1Q86UR5 1692 aaKnown RBP9.46□□□□□ -0.9
MSH6-209ENST00000538136 CFAP43Q8NDM7 1665 aa9.46□□□□□ -0.9
MSH6-209ENST00000538136 FYB1O15117 783 aa9.45□□□□□ -0.9
MSH6-209ENST00000538136 CHMP3Q9Y3E7 222 aa9.45□□□□□ -0.9
MSH6-209ENST00000538136 TTC5Q8N0Z6 440 aa9.45□□□□□ -0.9
MSH6-209ENST00000538136 DNMT1P26358 1616 aaKnown RBP9.45□□□□□ -0.9
MSH6-209ENST00000538136 NSD3Q9BZ95 1437 aa9.45□□□□□ -0.9
MSH6-209ENST00000538136 RIPK4P57078 832 aa9.44□□□□□ -0.9
MSH6-209ENST00000538136 PRR36Q9H6K5 1346 aa9.44□□□□□ -0.9
MSH6-209ENST00000538136 MADDQ8WXG6 1647 aa9.44□□□□□ -0.9
MSH6-209ENST00000538136 MCM10Q7L590 875 aa9.44□□□□□ -0.9
MSH6-209ENST00000538136 STAC3Q96MF2 364 aa9.44□□□□□ -0.9
MSH6-209ENST00000538136 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
MSH6-209ENST00000538136 CARD14Q9BXL6 1004 aa9.43□□□□□ -0.9
MSH6-209ENST00000538136 ABCC3O15438 1527 aa9.43□□□□□ -0.9
MSH6-209ENST00000538136 SLC39A6Q13433 755 aa9.43□□□□□ -0.9
MSH6-209ENST00000538136 DDB1Q16531 1140 aa9.43□□□□□ -0.9
MSH6-209ENST00000538136 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
MSH6-209ENST00000538136 ADAMTS8Q9UP79 889 aa9.43□□□□□ -0.9
MSH6-209ENST00000538136 EFCAB6Q5THR3 1501 aa9.43□□□□□ -0.9
MSH6-209ENST00000538136 PRKRIP1Q9H875 184 aaPredicted RBP9.42□□□□□ -0.9
MSH6-209ENST00000538136 ZBTB47Q9UFB7 747 aaPredicted RBP9.42□□□□□ -0.9
MSH6-209ENST00000538136 PLA2R1Q13018 1463 aa9.42□□□□□ -0.9
MSH6-209ENST00000538136 LRRIQ1Q96JM4 1722 aa9.42□□□□□ -0.9
MSH6-209ENST00000538136 FAM83GA6ND36 823 aa9.42□□□□□ -0.9
MSH6-209ENST00000538136 TRIM37O94972 964 aa9.42□□□□□ -0.9
MSH6-209ENST00000538136 AFF2P51816 1311 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms