RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.82□□□□□ -1
SNHG1-207ENST00000537965 CDK11AQ9UQ88 783 aaPredicted RBP8.82□□□□□ -1
SNHG1-207ENST00000537965 ZFYVE16Q7Z3T8 1539 aa8.81□□□□□ -1
SNHG1-207ENST00000537965 MYO5CQ9NQX4 1742 aa8.81□□□□□ -1
SNHG1-207ENST00000537965 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
SNHG1-207ENST00000537965 TRIM6-TRIM34B2RNG4 842 aa8.81□□□□□ -1
SNHG1-207ENST00000537965 NBPF3Q9H094 633 aa8.81□□□□□ -1
SNHG1-207ENST00000537965 KIAA1468Q9P260 1216 aa8.8□□□□□ -1
SNHG1-207ENST00000537965 TTC37Q6PGP7 1564 aa8.79□□□□□ -1
SNHG1-207ENST00000537965 EFCAB2Q5VUJ9 269 aa8.79□□□□□ -1
SNHG1-207ENST00000537965 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
SNHG1-207ENST00000537965 CDHR5Q9HBB8 845 aa8.79□□□□□ -1
SNHG1-207ENST00000537965 HECW1Q76N89 1606 aa8.79□□□□□ -1
SNHG1-207ENST00000537965 PLCH2O75038 1416 aa8.79□□□□□ -1
SNHG1-207ENST00000537965 PRSS12P56730 875 aa8.78□□□□□ -1
SNHG1-207ENST00000537965 CDCA7LQ96GN5 454 aa8.78□□□□□ -1
SNHG1-207ENST00000537965 NPDC1Q9NQX5 325 aaPredicted RBP8.78□□□□□ -1
SNHG1-207ENST00000537965 TSKSQ9UJT2 592 aa8.78□□□□□ -1
SNHG1-207ENST00000537965 FMN1Q68DA7 1419 aa8.78□□□□□ -1
SNHG1-207ENST00000537965 SCAPERQ9BY12 1400 aa8.78□□□□□ -1
SNHG1-207ENST00000537965 PREX1Q8TCU6 1659 aa8.78□□□□□ -1
SNHG1-207ENST00000537965 ATP10AO60312 1499 aa8.77□□□□□ -1
SNHG1-207ENST00000537965 HSPA2P54652 639 aa8.77□□□□□ -1.01
SNHG1-207ENST00000537965 SMYD5Q6GMV2 418 aa8.77□□□□□ -1.01
SNHG1-207ENST00000537965 ATP1B4Q9UN42 357 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-207ENST00000537965 UBTFP17480 764 aaKnown RBP8.76□□□□□ -1.01
SNHG1-207ENST00000537965 MLECQ14165 292 aa8.76□□□□□ -1.01
SNHG1-207ENST00000537965 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
SNHG1-207ENST00000537965 PACS2Q86VP3 889 aa8.76□□□□□ -1.01
SNHG1-207ENST00000537965 RBM27Q9P2N5 1060 aaKnown RBP8.76□□□□□ -1.01
SNHG1-207ENST00000537965 YEATS2Q9ULM3 1422 aa8.76□□□□□ -1.01
SNHG1-207ENST00000537965 C9orf84Q5VXU9 1444 aa8.75□□□□□ -1.01
SNHG1-207ENST00000537965 KCTD12Q96CX2 325 aaKnown RBP8.75□□□□□ -1.01
SNHG1-207ENST00000537965 CDK13Q14004 1512 aaKnown RBP8.75□□□□□ -1.01
SNHG1-207ENST00000537965 SIGLEC1Q9BZZ2 1709 aa8.74□□□□□ -1.01
SNHG1-207ENST00000537965 CLIP1P30622 1438 aa8.74□□□□□ -1.01
SNHG1-207ENST00000537965 KIF14Q15058 1648 aa8.74□□□□□ -1.01
SNHG1-207ENST00000537965 GOLGA8CPA6NN73 597 aa8.74□□□□□ -1.01
SNHG1-207ENST00000537965 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
SNHG1-207ENST00000537965 ZNF518AQ6AHZ1 1483 aa8.74□□□□□ -1.01
SNHG1-207ENST00000537965 ARHGEF12Q9NZN5 1544 aa8.74□□□□□ -1.01
SNHG1-207ENST00000537965 PTGDRQ13258 359 aa8.73□□□□□ -1.01
SNHG1-207ENST00000537965 TTC13Q8NBP0 860 aa8.73□□□□□ -1.01
SNHG1-207ENST00000537965 ESF1Q9H501 851 aaKnown RBP8.73□□□□□ -1.01
SNHG1-207ENST00000537965 HCSTQ9UBK5 93 aa8.73□□□□□ -1.01
SNHG1-207ENST00000537965 NUTM2FA1L443 756 aa8.72□□□□□ -1.01
SNHG1-207ENST00000537965 WNT2BQ93097 391 aa8.72□□□□□ -1.01
SNHG1-207ENST00000537965 SEPT9Q9UHD8 586 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-207ENST00000537965 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.01
SNHG1-207ENST00000537965 CDC42BPBQ9Y5S2 1711 aa8.71□□□□□ -1.01
SNHG1-207ENST00000537965 STRCQ7RTU9 1775 aa8.71□□□□□ -1.01
SNHG1-207ENST00000537965 ARHGAP5Q13017 1502 aa8.71□□□□□ -1.01
SNHG1-207ENST00000537965 FAM98CQ17RN3 349 aaKnown RBP8.71□□□□□ -1.02
SNHG1-207ENST00000537965 RBM26Q5T8P6 1007 aaKnown RBP8.71□□□□□ -1.02
SNHG1-207ENST00000537965 ZFRQ96KR1 1074 aaKnown RBP8.71□□□□□ -1.02
SNHG1-207ENST00000537965 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.02
SNHG1-207ENST00000537965 KDM5CP41229 1560 aa8.7□□□□□ -1.02
SNHG1-207ENST00000537965 PADI6Q6TGC4 694 aa8.7□□□□□ -1.02
SNHG1-207ENST00000537965 THSD4Q6ZMP0 1018 aa8.7□□□□□ -1.02
SNHG1-207ENST00000537965 TATDN2Q93075 761 aa8.7□□□□□ -1.02
SNHG1-207ENST00000537965 REREQ9P2R6 1566 aa8.69□□□□□ -1.02
SNHG1-207ENST00000537965 NBPF26B4DH59 902 aa8.69□□□□□ -1.02
SNHG1-207ENST00000537965 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
SNHG1-207ENST00000537965 FCHSD2O94868 740 aa8.69□□□□□ -1.02
SNHG1-207ENST00000537965 AFAP1Q8N556 730 aa8.69□□□□□ -1.02
SNHG1-207ENST00000537965 ANKK1Q8NFD2 765 aa8.69□□□□□ -1.02
SNHG1-207ENST00000537965 C3P01024 1663 aa8.69□□□□□ -1.02
SNHG1-207ENST00000537965 CEBPAP49715 358 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-207ENST00000537965 PNMA3Q9UL41 463 aa8.68□□□□□ -1.02
SNHG1-207ENST00000537965 ARHGAP35Q9NRY4 1499 aa8.68□□□□□ -1.02
SNHG1-207ENST00000537965 MLH3Q9UHC1 1453 aa8.68□□□□□ -1.02
SNHG1-207ENST00000537965 LRRIQ1Q96JM4 1722 aa8.68□□□□□ -1.02
SNHG1-207ENST00000537965 SMAPO00193 183 aa8.67□□□□□ -1.02
SNHG1-207ENST00000537965 PTPRTO14522 1441 aa8.67□□□□□ -1.02
SNHG1-207ENST00000537965 AGLP35573 1532 aa8.67□□□□□ -1.02
SNHG1-207ENST00000537965 CCDC18Q5T9S5 1454 aa8.67□□□□□ -1.02
SNHG1-207ENST00000537965 NUDT18Q6ZVK8 323 aa8.67□□□□□ -1.02
SNHG1-207ENST00000537965 CNTLNQ9NXG0 1405 aa8.67□□□□□ -1.02
SNHG1-207ENST00000537965 DIP2CQ9Y2E4 1556 aa8.67□□□□□ -1.02
SNHG1-207ENST00000537965 ITSN2Q9NZM3 1697 aa8.66□□□□□ -1.02
SNHG1-207ENST00000537965 PREX2Q70Z35 1606 aa8.66□□□□□ -1.02
SNHG1-207ENST00000537965 TRAPPC8Q9Y2L5 1435 aa8.66□□□□□ -1.02
SNHG1-207ENST00000537965 SOWAHBA6NEL2 793 aa8.66□□□□□ -1.02
SNHG1-207ENST00000537965 PTPN5P54829 565 aa8.66□□□□□ -1.02
SNHG1-207ENST00000537965 CDC42BPAQ5VT25 1732 aa8.66□□□□□ -1.02
SNHG1-207ENST00000537965 KIDINS220Q9ULH0 1771 aa8.65□□□□□ -1.02
SNHG1-207ENST00000537965 SUPT6HQ7KZ85 1726 aaKnown RBP8.65□□□□□ -1.03
SNHG1-207ENST00000537965 MROH2AA6NES4 1674 aa8.65□□□□□ -1.03
SNHG1-207ENST00000537965 ABCA6Q8N139 1617 aa8.65□□□□□ -1.03
SNHG1-207ENST00000537965 DISP3Q9P2K9 1392 aa8.64□□□□□ -1.03
SNHG1-207ENST00000537965 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-207ENST00000537965 HIC1Q14526 733 aa8.64□□□□□ -1.03
SNHG1-207ENST00000537965 ABCC1P33527 1531 aa8.64□□□□□ -1.03
SNHG1-207ENST00000537965 IQSEC2Q5JU85 1478 aa8.64□□□□□ -1.03
SNHG1-207ENST00000537965 GPR37O15354 613 aa8.63□□□□□ -1.03
SNHG1-207ENST00000537965 BCAMP50895 628 aa8.63□□□□□ -1.03
SNHG1-207ENST00000537965 EYA1Q99502 592 aa8.63□□□□□ -1.03
SNHG1-207ENST00000537965 NPATQ14207 1427 aa8.63□□□□□ -1.03
SNHG1-207ENST00000537965 CASKIN1Q8WXD9 1431 aa8.63□□□□□ -1.03
SNHG1-207ENST00000537965 LRCH3Q96II8 777 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms