RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
SNHG1-206ENST00000537925 PIP4K2BP78356 416 aa16.44■□□□□ 0.22
SNHG1-206ENST00000537925 CADPS2Q86UW7 1296 aa16.43■□□□□ 0.22
SNHG1-206ENST00000537925 CDC42BPGQ6DT37 1551 aa16.43■□□□□ 0.22
SNHG1-206ENST00000537925 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
SNHG1-206ENST00000537925 PLEKHH1Q9ULM0 1364 aa16.42■□□□□ 0.22
SNHG1-206ENST00000537925 ATF3P18847 181 aa16.42■□□□□ 0.22
SNHG1-206ENST00000537925 SLAIN2Q9P270 581 aa16.42■□□□□ 0.22
SNHG1-206ENST00000537925 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
SNHG1-206ENST00000537925 FMN2Q9NZ56 1722 aa16.41■□□□□ 0.22
SNHG1-206ENST00000537925 NBPF1Q3BBV0 1214 aa16.41■□□□□ 0.22
SNHG1-206ENST00000537925 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
SNHG1-206ENST00000537925 TRAK1Q9UPV9 953 aa16.4■□□□□ 0.22
SNHG1-206ENST00000537925 MST1RQ04912 1400 aa16.4■□□□□ 0.22
SNHG1-206ENST00000537925 RGPD8O14715 1765 aaPredicted RBP16.39■□□□□ 0.21
SNHG1-206ENST00000537925 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.21
SNHG1-206ENST00000537925 ADGRB2O60241 1585 aa16.39■□□□□ 0.21
SNHG1-206ENST00000537925 PRAM1Q96QH2 718 aa16.38■□□□□ 0.21
SNHG1-206ENST00000537925 HSPA1LP34931 641 aa16.37■□□□□ 0.21
SNHG1-206ENST00000537925 PHLPP1O60346 1717 aa16.36■□□□□ 0.21
SNHG1-206ENST00000537925 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
SNHG1-206ENST00000537925 POGKQ9P215 609 aa16.35■□□□□ 0.21
SNHG1-206ENST00000537925 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
SNHG1-206ENST00000537925 NHSL1Q5SYE7 1610 aa16.35■□□□□ 0.21
SNHG1-206ENST00000537925 QRICH2Q9H0J4 1663 aa16.34■□□□□ 0.21
SNHG1-206ENST00000537925 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
SNHG1-206ENST00000537925 C1orf167Q5SNV9 1468 aa16.34■□□□□ 0.21
SNHG1-206ENST00000537925 ROCK2O75116 1388 aaKnown RBP16.34■□□□□ 0.21
SNHG1-206ENST00000537925 AHDC1Q5TGY3 1603 aaPredicted RBP16.33■□□□□ 0.2
SNHG1-206ENST00000537925 SAFB2Q14151 953 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNHG1-206ENST00000537925 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
SNHG1-206ENST00000537925 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
SNHG1-206ENST00000537925 COL16A1Q07092 1604 aaPredicted RBP16.31■□□□□ 0.2
SNHG1-206ENST00000537925 CENPBP07199 599 aaPredicted RBP16.29■□□□□ 0.2
SNHG1-206ENST00000537925 KIF1AQ12756 1690 aa16.29■□□□□ 0.2
SNHG1-206ENST00000537925 MINK1Q8N4C8 1332 aaPredicted RBP16.29■□□□□ 0.2
SNHG1-206ENST00000537925 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
SNHG1-206ENST00000537925 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
SNHG1-206ENST00000537925 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.2
SNHG1-206ENST00000537925 HIRIP3Q9BW71 556 aaPredicted RBP16.27■□□□□ 0.19
SNHG1-206ENST00000537925 TULP4Q9NRJ4 1543 aa16.27■□□□□ 0.19
SNHG1-206ENST00000537925 ANKARQ7Z5J8 1434 aa16.27■□□□□ 0.19
SNHG1-206ENST00000537925 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
SNHG1-206ENST00000537925 CARD11Q9BXL7 1154 aa16.26■□□□□ 0.19
SNHG1-206ENST00000537925 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
SNHG1-206ENST00000537925 EIF3AQ14152 1382 aaKnown RBP16.25■□□□□ 0.19
SNHG1-206ENST00000537925 TOPAZ1Q8N9V7 1692 aa16.25■□□□□ 0.19
SNHG1-206ENST00000537925 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
SNHG1-206ENST00000537925 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
SNHG1-206ENST00000537925 ATP7BP35670 1465 aa16.22■□□□□ 0.19
SNHG1-206ENST00000537925 PRR36Q9H6K5 1346 aa16.21■□□□□ 0.19
SNHG1-206ENST00000537925 DDX17Q92841 729 aaKnown RBP16.21■□□□□ 0.19
SNHG1-206ENST00000537925 PXDNQ92626 1479 aa16.2■□□□□ 0.18
SNHG1-206ENST00000537925 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
SNHG1-206ENST00000537925 CDK19Q9BWU1 502 aa16.2■□□□□ 0.18
SNHG1-206ENST00000537925 SOS2Q07890 1332 aaPredicted RBP16.19■□□□□ 0.18
SNHG1-206ENST00000537925 NPHP3Q7Z494 1330 aa16.19■□□□□ 0.18
SNHG1-206ENST00000537925 JCADQ9P266 1359 aa16.18■□□□□ 0.18
SNHG1-206ENST00000537925 PHF8Q9UPP1 1060 aa16.18■□□□□ 0.18
SNHG1-206ENST00000537925 FOXO3O43524 673 aa16.17■□□□□ 0.18
SNHG1-206ENST00000537925 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
SNHG1-206ENST00000537925 TRPM3Q9HCF6 1732 aaPredicted RBP16.16■□□□□ 0.18
SNHG1-206ENST00000537925 LRRC59Q96AG4 307 aaKnown RBP16.16■□□□□ 0.18
SNHG1-206ENST00000537925 RGS17Q9UGC6 210 aaPredicted RBP16.16■□□□□ 0.18
SNHG1-206ENST00000537925 COL22A1Q8NFW1 1626 aaPredicted RBP16.16■□□□□ 0.18
SNHG1-206ENST00000537925 EVC2Q86UK5 1308 aa16.15■□□□□ 0.18
SNHG1-206ENST00000537925 USP47Q96K76 1375 aa16.14■□□□□ 0.17
SNHG1-206ENST00000537925 SRPK2P78362 688 aaKnown RBP16.14■□□□□ 0.17
SNHG1-206ENST00000537925 PMFBP1Q8TBY8 1022 aa16.14■□□□□ 0.17
SNHG1-206ENST00000537925 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
SNHG1-206ENST00000537925 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
SNHG1-206ENST00000537925 CABP2Q9NPB3 220 aa16.13■□□□□ 0.17
SNHG1-206ENST00000537925 ALS2Q96Q42 1657 aa16.13■□□□□ 0.17
SNHG1-206ENST00000537925 PNPLA6Q8IY17 1366 aa16.13■□□□□ 0.17
SNHG1-206ENST00000537925 AKAP12Q02952 1782 aa16.13■□□□□ 0.17
SNHG1-206ENST00000537925 PELP1Q8IZL8 1130 aaKnown RBP16.12■□□□□ 0.17
SNHG1-206ENST00000537925 TESK2Q96S53 571 aa16.12■□□□□ 0.17
SNHG1-206ENST00000537925 PLEKHG3A1L390 1219 aa16.11■□□□□ 0.17
SNHG1-206ENST00000537925 XPCQ01831 940 aaPredicted RBP16.11■□□□□ 0.17
SNHG1-206ENST00000537925 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
SNHG1-206ENST00000537925 SPATA31A6Q5VVP1 1343 aa16.11■□□□□ 0.17
SNHG1-206ENST00000537925 POLR3AO14802 1390 aaPredicted RBP16.11■□□□□ 0.17
SNHG1-206ENST00000537925 PPIP5K1Q6PFW1 1433 aa16.11■□□□□ 0.17
SNHG1-206ENST00000537925 PSME1Q06323 249 aa16.1■□□□□ 0.17
SNHG1-206ENST00000537925 MARF1Q9Y4F3 1742 aaKnown RBP16.1■□□□□ 0.17
SNHG1-206ENST00000537925 SBNO1A3KN83 1393 aa16.09■□□□□ 0.17
SNHG1-206ENST00000537925 ABCA3Q99758 1704 aa16.09■□□□□ 0.17
SNHG1-206ENST00000537925 LRP6O75581 1613 aa16.09■□□□□ 0.17
SNHG1-206ENST00000537925 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
SNHG1-206ENST00000537925 SLC24A1O60721 1099 aa16.09■□□□□ 0.17
SNHG1-206ENST00000537925 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
SNHG1-206ENST00000537925 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
SNHG1-206ENST00000537925 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.16
SNHG1-206ENST00000537925 ACEP12821 1306 aa16.08■□□□□ 0.16
SNHG1-206ENST00000537925 PUS7Q96PZ0 661 aaKnown RBP16.07■□□□□ 0.16
SNHG1-206ENST00000537925 MON2Q7Z3U7 1717 aa16.07■□□□□ 0.16
SNHG1-206ENST00000537925 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
SNHG1-206ENST00000537925 MIER1Q8N108 512 aa16.06■□□□□ 0.16
SNHG1-206ENST00000537925 CABP1Q9NZU7 370 aa16.06■□□□□ 0.16
SNHG1-206ENST00000537925 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms