RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 FAM161AQ3B820 660 aa7.23□□□□□ -1.25
SNHG1-203ENST00000537024 BEGAINQ9BUH8 593 aa7.23□□□□□ -1.25
SNHG1-203ENST00000537024 CCDC88BA6NC98 1476 aa7.23□□□□□ -1.25
SNHG1-203ENST00000537024 PTPRMP28827 1452 aa7.23□□□□□ -1.25
SNHG1-203ENST00000537024 BCL2L12Q9HB09 334 aa7.22□□□□□ -1.25
SNHG1-203ENST00000537024 RBM27Q9P2N5 1060 aaKnown RBP7.22□□□□□ -1.25
SNHG1-203ENST00000537024 ADGRG1Q9Y653 693 aa7.22□□□□□ -1.25
SNHG1-203ENST00000537024 MAP3K4Q9Y6R4 1608 aa7.22□□□□□ -1.25
SNHG1-203ENST00000537024 ADAMTSL3P82987 1691 aa7.22□□□□□ -1.25
SNHG1-203ENST00000537024 SKIV2LQ15477 1246 aaKnown RBP7.21□□□□□ -1.26
SNHG1-203ENST00000537024 PXYLP1Q8TE99 480 aa7.21□□□□□ -1.26
SNHG1-203ENST00000537024 FAM217BQ9NTX9 383 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-203ENST00000537024 NLRP7Q8WX94 980 aa7.2□□□□□ -1.26
SNHG1-203ENST00000537024 ZBED2Q9BTP6 218 aa7.2□□□□□ -1.26
SNHG1-203ENST00000537024 ADAM33Q9BZ11 813 aa7.2□□□□□ -1.26
SNHG1-203ENST00000537024 TEX14Q8IWB6 1497 aa7.19□□□□□ -1.26
SNHG1-203ENST00000537024 CUX1P39880 1505 aa7.19□□□□□ -1.26
SNHG1-203ENST00000537024 RUSC2Q8N2Y8 1516 aa7.19□□□□□ -1.26
SNHG1-203ENST00000537024 PRSS12P56730 875 aa7.19□□□□□ -1.26
SNHG1-203ENST00000537024 RBM46Q8TBY0 533 aaKnown RBP7.19□□□□□ -1.26
SNHG1-203ENST00000537024 WNT2BQ93097 391 aa7.19□□□□□ -1.26
SNHG1-203ENST00000537024 ONECUT3O60422 494 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-203ENST00000537024 TTC13Q8NBP0 860 aa7.18□□□□□ -1.26
SNHG1-203ENST00000537024 CDCA7LQ96GN5 454 aa7.18□□□□□ -1.26
SNHG1-203ENST00000537024 ABCA10Q8WWZ4 1543 aa7.17□□□□□ -1.26
SNHG1-203ENST00000537024 GOLGA8CPA6NN73 597 aa7.17□□□□□ -1.26
SNHG1-203ENST00000537024 UBTFP17480 764 aaKnown RBP7.17□□□□□ -1.26
SNHG1-203ENST00000537024 PTPREP23469 700 aa7.17□□□□□ -1.26
SNHG1-203ENST00000537024 MRPL50Q8N5N7 158 aaKnown RBP7.17□□□□□ -1.26
SNHG1-203ENST00000537024 POLR3EQ9NVU0 708 aa7.17□□□□□ -1.26
SNHG1-203ENST00000537024 DIXDC1Q155Q3 683 aa7.16□□□□□ -1.26
SNHG1-203ENST00000537024 ARID3AQ99856 593 aa7.16□□□□□ -1.26
SNHG1-203ENST00000537024 ASXL2Q76L83 1435 aa7.16□□□□□ -1.26
SNHG1-203ENST00000537024 PLB1Q6P1J6 1458 aa7.16□□□□□ -1.26
SNHG1-203ENST00000537024 KIAA0586Q9BVV6 1533 aa7.16□□□□□ -1.26
SNHG1-203ENST00000537024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.15□□□□□ -1.26
SNHG1-203ENST00000537024 APBB1O00213 710 aa7.15□□□□□ -1.26
SNHG1-203ENST00000537024 MCM6Q14566 821 aa7.15□□□□□ -1.26
SNHG1-203ENST00000537024 MYSM1Q5VVJ2 828 aa7.15□□□□□ -1.26
SNHG1-203ENST00000537024 PROCA1Q8NCQ7 364 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-203ENST00000537024 FHAD1B1AJZ9 1412 aa7.15□□□□□ -1.27
SNHG1-203ENST00000537024 A6NJR5 290 aa7.14□□□□□ -1.27
SNHG1-203ENST00000537024 ARID3CA6NKF2 412 aa7.14□□□□□ -1.27
SNHG1-203ENST00000537024 CLK2P49760 499 aaKnown RBP7.14□□□□□ -1.27
SNHG1-203ENST00000537024 MADDQ8WXG6 1647 aa7.14□□□□□ -1.27
SNHG1-203ENST00000537024 CLUAP1Q96AJ1 413 aa7.14□□□□□ -1.27
SNHG1-203ENST00000537024 BCORL1Q5H9F3 1711 aa7.13□□□□□ -1.27
SNHG1-203ENST00000537024 ABCC2Q92887 1545 aa7.13□□□□□ -1.27
SNHG1-203ENST00000537024 TBC1D2Q9BYX2 928 aa7.13□□□□□ -1.27
SNHG1-203ENST00000537024 CUL7Q14999 1698 aa7.12□□□□□ -1.27
SNHG1-203ENST00000537024 MED1Q15648 1581 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-203ENST00000537024 EPRSP07814 1512 aaKnown RBP7.12□□□□□ -1.27
SNHG1-203ENST00000537024 RCCD1A6NED2 376 aa7.12□□□□□ -1.27
SNHG1-203ENST00000537024 ITGBL1O95965 494 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-203ENST00000537024 HSPA2P54652 639 aa7.12□□□□□ -1.27
SNHG1-203ENST00000537024 C1orf115Q9H7X2 142 aa7.12□□□□□ -1.27
SNHG1-203ENST00000537024 PPP1R3GB7ZBB8 358 aa7.11□□□□□ -1.27
SNHG1-203ENST00000537024 RAD21O60216 631 aa7.11□□□□□ -1.27
SNHG1-203ENST00000537024 TRAK2O60296 914 aa7.11□□□□□ -1.27
SNHG1-203ENST00000537024 COL9A1P20849 921 aa7.11□□□□□ -1.27
SNHG1-203ENST00000537024 SULF1Q8IWU6 871 aa7.11□□□□□ -1.27
SNHG1-203ENST00000537024 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNHG1-203ENST00000537024 NBPF3Q9H094 633 aa7.11□□□□□ -1.27
SNHG1-203ENST00000537024 NBPF26B4DH59 902 aa7.1□□□□□ -1.27
SNHG1-203ENST00000537024 EYA1Q99502 592 aa7.1□□□□□ -1.27
SNHG1-203ENST00000537024 FAM198AQ9UFP1 575 aa7.1□□□□□ -1.27
SNHG1-203ENST00000537024 RIMS1Q86UR5 1692 aaKnown RBP7.09□□□□□ -1.27
SNHG1-203ENST00000537024 DDX11L8A8MPP1 907 aa7.09□□□□□ -1.27
SNHG1-203ENST00000537024 DNAJB2P25686 324 aa7.09□□□□□ -1.27
SNHG1-203ENST00000537024 NUDT18Q6ZVK8 323 aa7.09□□□□□ -1.27
SNHG1-203ENST00000537024 PACS2Q86VP3 889 aa7.09□□□□□ -1.27
SNHG1-203ENST00000537024 TSKSQ9UJT2 592 aa7.09□□□□□ -1.27
SNHG1-203ENST00000537024 PNMA3Q9UL41 463 aa7.09□□□□□ -1.27
SNHG1-203ENST00000537024 IQSEC2Q5JU85 1478 aa7.09□□□□□ -1.27
SNHG1-203ENST00000537024 SPDYE5A6NIY4 337 aa7.08□□□□□ -1.28
SNHG1-203ENST00000537024 CD46P15529 392 aa7.08□□□□□ -1.28
SNHG1-203ENST00000537024 RFC5P40937 340 aa7.08□□□□□ -1.28
SNHG1-203ENST00000537024 RIC3Q7Z5B4 369 aa7.08□□□□□ -1.28
SNHG1-203ENST00000537024 PROSER2Q86WR7 435 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-203ENST00000537024 NUTM1Q86Y26 1132 aa7.08□□□□□ -1.28
SNHG1-203ENST00000537024 BANK1Q8NDB2 785 aa7.08□□□□□ -1.28
SNHG1-203ENST00000537024 SPIRE2Q8WWL2 714 aa7.08□□□□□ -1.28
SNHG1-203ENST00000537024 TATDN2Q93075 761 aa7.08□□□□□ -1.28
SNHG1-203ENST00000537024 ERICH3Q5RHP9 1530 aa7.07□□□□□ -1.28
SNHG1-203ENST00000537024 TRIM6-TRIM34B2RNG4 842 aa7.07□□□□□ -1.28
SNHG1-203ENST00000537024 TMEM259Q4ZIN3 620 aa7.07□□□□□ -1.28
SNHG1-203ENST00000537024 Q6ZNB5 142 aa7.07□□□□□ -1.28
SNHG1-203ENST00000537024 ANKK1Q8NFD2 765 aa7.07□□□□□ -1.28
SNHG1-203ENST00000537024 LIMD1Q9UGP4 676 aa7.07□□□□□ -1.28
SNHG1-203ENST00000537024 RABGEF1Q9UJ41 708 aa7.07□□□□□ -1.28
SNHG1-203ENST00000537024 STRCQ7RTU9 1775 aa7.07□□□□□ -1.28
SNHG1-203ENST00000537024 BCAMP50895 628 aa7.06□□□□□ -1.28
SNHG1-203ENST00000537024 PROX2Q3B8N5 592 aa7.06□□□□□ -1.28
SNHG1-203ENST00000537024 TMEM134Q9H6X4 195 aa7.06□□□□□ -1.28
SNHG1-203ENST00000537024 MAGI3Q5TCQ9 1506 aa7.06□□□□□ -1.28
SNHG1-203ENST00000537024 LTBP4Q8N2S1 1624 aa7.05□□□□□ -1.28
SNHG1-203ENST00000537024 UHRF1BP1LA0JNW5 1464 aa7.05□□□□□ -1.28
SNHG1-203ENST00000537024 PPP2R2DQ66LE6 453 aa7.05□□□□□ -1.28
SNHG1-203ENST00000537024 CCDC82Q8N4S0 544 aa7.05□□□□□ -1.28
SNHG1-203ENST00000537024 POM121Q96HA1 1249 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms