RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ORAI2Q96SN7 254 aa19.1■□□□□ 0.65
PRKDC-206ENST00000536429 TRAK1Q9UPV9 953 aa19.1■□□□□ 0.65
PRKDC-206ENST00000536429 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
PRKDC-206ENST00000536429 L3MBTL2Q969R5 705 aa19.09■□□□□ 0.65
PRKDC-206ENST00000536429 COL16A1Q07092 1604 aaPredicted RBP19.08■□□□□ 0.65
PRKDC-206ENST00000536429 AHDC1Q5TGY3 1603 aaPredicted RBP19.08■□□□□ 0.65
PRKDC-206ENST00000536429 NUTM2FA1L443 756 aa19.08■□□□□ 0.64
PRKDC-206ENST00000536429 PHLPP1O60346 1717 aa19.08■□□□□ 0.64
PRKDC-206ENST00000536429 CDC42BPGQ6DT37 1551 aa19.06■□□□□ 0.64
PRKDC-206ENST00000536429 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
PRKDC-206ENST00000536429 NBPF1Q3BBV0 1214 aa19.05■□□□□ 0.64
PRKDC-206ENST00000536429 ILDR2Q71H61 639 aa19.05■□□□□ 0.64
PRKDC-206ENST00000536429 POGKQ9P215 609 aa19.04■□□□□ 0.64
PRKDC-206ENST00000536429 JCADQ9P266 1359 aa19.04■□□□□ 0.64
PRKDC-206ENST00000536429 ESCO1Q5FWF5 840 aa19.02■□□□□ 0.64
PRKDC-206ENST00000536429 HIRIP3Q9BW71 556 aaPredicted RBP19.01■□□□□ 0.63
PRKDC-206ENST00000536429 PCGF6Q9BYE7 350 aa19■□□□□ 0.63
PRKDC-206ENST00000536429 NHSL1Q5SYE7 1610 aa19■□□□□ 0.63
PRKDC-206ENST00000536429 MINK1Q8N4C8 1332 aaPredicted RBP19■□□□□ 0.63
PRKDC-206ENST00000536429 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
PRKDC-206ENST00000536429 RGS17Q9UGC6 210 aaPredicted RBP18.97■□□□□ 0.63
PRKDC-206ENST00000536429 SOS2Q07890 1332 aaPredicted RBP18.97■□□□□ 0.63
PRKDC-206ENST00000536429 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
PRKDC-206ENST00000536429 LRP6O75581 1613 aa18.96■□□□□ 0.63
PRKDC-206ENST00000536429 FOXO3O43524 673 aa18.96■□□□□ 0.63
PRKDC-206ENST00000536429 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
PRKDC-206ENST00000536429 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
PRKDC-206ENST00000536429 LRRC59Q96AG4 307 aaKnown RBP18.95■□□□□ 0.62
PRKDC-206ENST00000536429 KIAA1210Q9ULL0 1709 aa18.94■□□□□ 0.62
PRKDC-206ENST00000536429 PNPLA6Q8IY17 1366 aa18.93■□□□□ 0.62
PRKDC-206ENST00000536429 ADGRB2O60241 1585 aa18.93■□□□□ 0.62
PRKDC-206ENST00000536429 ARHGEF28Q8N1W1 1705 aaKnown RBP18.93■□□□□ 0.62
PRKDC-206ENST00000536429 SPATA31A6Q5VVP1 1343 aa18.93■□□□□ 0.62
PRKDC-206ENST00000536429 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
PRKDC-206ENST00000536429 NUTM2BA6NNL0 878 aaPredicted RBP18.92■□□□□ 0.62
PRKDC-206ENST00000536429 NUTM2EB1AL46 878 aaPredicted RBP18.92■□□□□ 0.62
PRKDC-206ENST00000536429 WASLO00401 505 aaPredicted RBP18.92■□□□□ 0.62
PRKDC-206ENST00000536429 NUTM2AQ8IVF1 878 aaPredicted RBP18.92■□□□□ 0.62
PRKDC-206ENST00000536429 NPHP3Q7Z494 1330 aa18.92■□□□□ 0.62
PRKDC-206ENST00000536429 SHPRHQ149N8 1683 aa18.92■□□□□ 0.62
PRKDC-206ENST00000536429 PXDNQ92626 1479 aa18.91■□□□□ 0.62
PRKDC-206ENST00000536429 PHF8Q9UPP1 1060 aa18.91■□□□□ 0.62
PRKDC-206ENST00000536429 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
PRKDC-206ENST00000536429 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
PRKDC-206ENST00000536429 USP32Q8NFA0 1604 aa18.89■□□□□ 0.62
PRKDC-206ENST00000536429 PMFBP1Q8TBY8 1022 aa18.89■□□□□ 0.61
PRKDC-206ENST00000536429 ROCK2O75116 1388 aaKnown RBP18.88■□□□□ 0.61
PRKDC-206ENST00000536429 TRPM1Q7Z4N2 1603 aa18.88■□□□□ 0.61
PRKDC-206ENST00000536429 TULP4Q9NRJ4 1543 aa18.86■□□□□ 0.61
PRKDC-206ENST00000536429 CENPJQ9HC77 1338 aaPredicted RBP18.86■□□□□ 0.61
PRKDC-206ENST00000536429 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
PRKDC-206ENST00000536429 POTEAQ6S8J7 498 aa18.86■□□□□ 0.61
PRKDC-206ENST00000536429 KRT28Q7Z3Y7 464 aa18.86■□□□□ 0.61
PRKDC-206ENST00000536429 CDK19Q9BWU1 502 aa18.86■□□□□ 0.61
PRKDC-206ENST00000536429 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
PRKDC-206ENST00000536429 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
PRKDC-206ENST00000536429 ATP7BP35670 1465 aa18.84■□□□□ 0.61
PRKDC-206ENST00000536429 EIF3AQ14152 1382 aaKnown RBP18.83■□□□□ 0.61
PRKDC-206ENST00000536429 GPRASP1Q5JY77 1395 aa18.83■□□□□ 0.61
PRKDC-206ENST00000536429 NUDT16Q96DE0 195 aaKnown RBP18.83■□□□□ 0.6
PRKDC-206ENST00000536429 SPATA31A3Q5VYP0 1347 aa18.82■□□□□ 0.6
PRKDC-206ENST00000536429 ADAMTS2O95450 1211 aa18.82■□□□□ 0.6
PRKDC-206ENST00000536429 PSME1Q06323 249 aa18.8■□□□□ 0.6
PRKDC-206ENST00000536429 RALGAPBQ86X10 1494 aa18.79■□□□□ 0.6
PRKDC-206ENST00000536429 C8orf37Q96NL8 207 aa18.79■□□□□ 0.6
PRKDC-206ENST00000536429 CARD11Q9BXL7 1154 aa18.79■□□□□ 0.6
PRKDC-206ENST00000536429 CABP2Q9NPB3 220 aa18.79■□□□□ 0.6
PRKDC-206ENST00000536429 TNS3Q68CZ2 1445 aa18.78■□□□□ 0.6
PRKDC-206ENST00000536429 COL22A1Q8NFW1 1626 aaPredicted RBP18.78■□□□□ 0.6
PRKDC-206ENST00000536429 AFF2P51816 1311 aa18.77■□□□□ 0.6
PRKDC-206ENST00000536429 PLEKHG5O94827 1062 aa18.77■□□□□ 0.6
PRKDC-206ENST00000536429 SRPK2P78362 688 aaKnown RBP18.77■□□□□ 0.6
PRKDC-206ENST00000536429 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.6
PRKDC-206ENST00000536429 SBNO1A3KN83 1393 aa18.77■□□□□ 0.6
PRKDC-206ENST00000536429 SOCS7O14512 581 aa18.76■□□□□ 0.59
PRKDC-206ENST00000536429 CCDC61Q9Y6R9 512 aa18.76■□□□□ 0.59
PRKDC-206ENST00000536429 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
PRKDC-206ENST00000536429 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
PRKDC-206ENST00000536429 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
PRKDC-206ENST00000536429 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
PRKDC-206ENST00000536429 PLEKHG3A1L390 1219 aa18.73■□□□□ 0.59
PRKDC-206ENST00000536429 NGLY1Q96IV0 654 aa18.73■□□□□ 0.59
PRKDC-206ENST00000536429 ACEP12821 1306 aa18.73■□□□□ 0.59
PRKDC-206ENST00000536429 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
PRKDC-206ENST00000536429 POLR3AO14802 1390 aaPredicted RBP18.72■□□□□ 0.59
PRKDC-206ENST00000536429 TOPAZ1Q8N9V7 1692 aa18.72■□□□□ 0.59
PRKDC-206ENST00000536429 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
PRKDC-206ENST00000536429 PPIP5K1Q6PFW1 1433 aa18.71■□□□□ 0.59
PRKDC-206ENST00000536429 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
PRKDC-206ENST00000536429 EVC2Q86UK5 1308 aa18.71■□□□□ 0.59
PRKDC-206ENST00000536429 ARHGEF10O15013 1369 aa18.7■□□□□ 0.58
PRKDC-206ENST00000536429 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
PRKDC-206ENST00000536429 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
PRKDC-206ENST00000536429 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
PRKDC-206ENST00000536429 ITSN1Q15811 1721 aa18.68■□□□□ 0.58
PRKDC-206ENST00000536429 USP21Q9UK80 565 aa18.67■□□□□ 0.58
PRKDC-206ENST00000536429 SBNO2Q9Y2G9 1366 aa18.67■□□□□ 0.58
PRKDC-206ENST00000536429 NUTM2GQ5VZR2 741 aa18.66■□□□□ 0.58
PRKDC-206ENST00000536429 QTRT2Q9H974 415 aaKnown RBP18.66■□□□□ 0.58
PRKDC-206ENST00000536429 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms