RNA–Protein interactions for RNA: ENST00000535318.6

CPNE2-202, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-202ENST00000535318 KDM2BQ8NHM5 1336 aa29.64■■■□□ 2.33
CPNE2-202ENST00000535318 DMRT2Q9Y5R5 561 aa29.63■■■□□ 2.33
CPNE2-202ENST00000535318 ADGRB1O14514 1584 aa29.62■■■□□ 2.33
CPNE2-202ENST00000535318 NSD3Q9BZ95 1437 aa29.62■■■□□ 2.33
CPNE2-202ENST00000535318 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.62■■■□□ 2.33
CPNE2-202ENST00000535318 AGLP35573 1532 aa29.6■■■□□ 2.33
CPNE2-202ENST00000535318 QRICH2Q9H0J4 1663 aa29.6■■■□□ 2.33
CPNE2-202ENST00000535318 NKTRP30414 1462 aaKnown RBP29.59■■■□□ 2.33
CPNE2-202ENST00000535318 TNNT2P45379 298 aaPredicted RBP29.59■■■□□ 2.33
CPNE2-202ENST00000535318 NUTM2DQ5VT03 806 aaPredicted RBP29.59■■■□□ 2.33
CPNE2-202ENST00000535318 POLR3AO14802 1390 aaPredicted RBP29.59■■■□□ 2.33
CPNE2-202ENST00000535318 MORC1Q86VD1 984 aa29.59■■■□□ 2.33
CPNE2-202ENST00000535318 RPGRIP1LQ68CZ1 1315 aa29.58■■■□□ 2.33
CPNE2-202ENST00000535318 E9PSI1 815 aa29.58■■■□□ 2.33
CPNE2-202ENST00000535318 PREX1Q8TCU6 1659 aa29.57■■■□□ 2.32
CPNE2-202ENST00000535318 BCAR3O75815 825 aa29.57■■■□□ 2.32
CPNE2-202ENST00000535318 IDI1Q13907 227 aa29.56■■■□□ 2.32
CPNE2-202ENST00000535318 CENPQQ7L2Z9 268 aaPredicted RBP29.56■■■□□ 2.32
CPNE2-202ENST00000535318 SLC52A1Q9NWF4 448 aa29.53■■■□□ 2.32
CPNE2-202ENST00000535318 NEXMIFQ5QGS0 1516 aa29.52■■■□□ 2.32
CPNE2-202ENST00000535318 ARHGEF40Q8TER5 1519 aa29.52■■■□□ 2.32
CPNE2-202ENST00000535318 NGEFQ8N5V2 710 aa29.51■■■□□ 2.32
CPNE2-202ENST00000535318 WWC1Q8IX03 1113 aa29.51■■■□□ 2.31
CPNE2-202ENST00000535318 SHPRHQ149N8 1683 aa29.48■■■□□ 2.31
CPNE2-202ENST00000535318 FBXO31Q5XUX0 539 aaPredicted RBP29.48■■■□□ 2.31
CPNE2-202ENST00000535318 PPP6R1Q9UPN7 881 aa29.48■■■□□ 2.31
CPNE2-202ENST00000535318 VGFO15240 615 aaPredicted RBP29.46■■■□□ 2.31
CPNE2-202ENST00000535318 NEUROD2Q15784 382 aa29.46■■■□□ 2.31
CPNE2-202ENST00000535318 RRP7AQ9Y3A4 280 aaKnown RBP29.45■■■□□ 2.31
CPNE2-202ENST00000535318 CLTCQ00610 1675 aaKnown RBP29.45■■■□□ 2.31
CPNE2-202ENST00000535318 DEKP35659 375 aaKnown RBP29.45■■■□□ 2.3
CPNE2-202ENST00000535318 TMEM131LA2VDJ0 1609 aa29.45■■■□□ 2.3
CPNE2-202ENST00000535318 BCL11AQ9H165 835 aa29.44■■■□□ 2.3
CPNE2-202ENST00000535318 MYO5BQ9ULV0 1848 aa29.44■■■□□ 2.3
CPNE2-202ENST00000535318 CGNL1Q0VF96 1302 aa29.44■■■□□ 2.3
CPNE2-202ENST00000535318 MTHFSP49914 203 aa29.44■■■□□ 2.3
CPNE2-202ENST00000535318 RUNDC1Q96C34 613 aa29.43■■■□□ 2.3
CPNE2-202ENST00000535318 SENP3Q9H4L4 574 aaPredicted RBP29.43■■■□□ 2.3
CPNE2-202ENST00000535318 EVC2Q86UK5 1308 aa29.42■■■□□ 2.3
CPNE2-202ENST00000535318 TULP4Q9NRJ4 1543 aa29.41■■■□□ 2.3
CPNE2-202ENST00000535318 TCP11L2Q8N4U5 519 aa29.41■■■□□ 2.3
CPNE2-202ENST00000535318 SAFB2Q14151 953 aaKnown RBP eCLIP29.4■■■□□ 2.3
CPNE2-202ENST00000535318 MLECQ14165 292 aa29.4■■■□□ 2.3
CPNE2-202ENST00000535318 ARHGEF28Q8N1W1 1705 aaKnown RBP29.4■■■□□ 2.3
CPNE2-202ENST00000535318 USP32Q8NFA0 1604 aa29.4■■■□□ 2.3
CPNE2-202ENST00000535318 CABP2Q9NPB3 220 aa29.4■■■□□ 2.3
CPNE2-202ENST00000535318 ZFYVE9O95405 1425 aa29.38■■■□□ 2.29
CPNE2-202ENST00000535318 PUS7Q96PZ0 661 aaKnown RBP29.37■■■□□ 2.29
CPNE2-202ENST00000535318 ANKRD36BQ8N2N9 1353 aa29.36■■■□□ 2.29
CPNE2-202ENST00000535318 IQSEC2Q5JU85 1478 aa29.36■■■□□ 2.29
CPNE2-202ENST00000535318 RGS3P49796 1198 aa29.36■■■□□ 2.29
CPNE2-202ENST00000535318 STK26Q9P289 416 aa29.35■■■□□ 2.29
CPNE2-202ENST00000535318 PDE3AQ14432 1141 aa29.34■■■□□ 2.29
CPNE2-202ENST00000535318 CFAP53Q96M91 514 aa29.34■■■□□ 2.29
CPNE2-202ENST00000535318 PHF23Q9BUL5 403 aaPredicted RBP29.34■■■□□ 2.29
CPNE2-202ENST00000535318 SPATA31D1Q6ZQQ2 1576 aa29.34■■■□□ 2.29
CPNE2-202ENST00000535318 C8orf34Q49A92 452 aa29.34■■■□□ 2.29
CPNE2-202ENST00000535318 PANK1Q8TE04 598 aa29.34■■■□□ 2.29
CPNE2-202ENST00000535318 LAS1LQ9Y4W2 734 aaKnown RBP29.34■■■□□ 2.29
CPNE2-202ENST00000535318 FAM161AQ3B820 660 aa29.33■■■□□ 2.29
CPNE2-202ENST00000535318 IGHDP01880 384 aa29.33■■■□□ 2.29
CPNE2-202ENST00000535318 CANXP27824 592 aaKnown RBP29.32■■■□□ 2.28
CPNE2-202ENST00000535318 RTL5Q5HYW3 569 aaPredicted RBP29.32■■■□□ 2.28
CPNE2-202ENST00000535318 COG6Q9Y2V7 657 aa29.31■■■□□ 2.28
CPNE2-202ENST00000535318 FRAT1Q92837 279 aaPredicted RBP29.29■■■□□ 2.28
CPNE2-202ENST00000535318 RARSP54136 660 aaKnown RBP29.29■■■□□ 2.28
CPNE2-202ENST00000535318 WDR63Q8IWG1 891 aa29.29■■■□□ 2.28
CPNE2-202ENST00000535318 DDRGK1Q96HY6 314 aa29.28■■■□□ 2.28
CPNE2-202ENST00000535318 NSD2O96028 1365 aa29.28■■■□□ 2.28
CPNE2-202ENST00000535318 U2AF1L5P0DN76 240 aaPredicted RBP29.27■■■□□ 2.28
CPNE2-202ENST00000535318 U2AF1Q01081 240 aaKnown RBP eCLIP29.27■■■□□ 2.28
CPNE2-202ENST00000535318 NINLQ9Y2I6 1382 aa29.26■■■□□ 2.28
CPNE2-202ENST00000535318 SRPK2P78362 688 aaKnown RBP29.26■■■□□ 2.27
CPNE2-202ENST00000535318 CLUAP1Q96AJ1 413 aa29.26■■■□□ 2.27
CPNE2-202ENST00000535318 A0A1W2PP64 1363 aa29.25■■■□□ 2.27
CPNE2-202ENST00000535318 CCDC27Q2M243 656 aa29.25■■■□□ 2.27
CPNE2-202ENST00000535318 STAG3Q9UJ98 1225 aa29.24■■■□□ 2.27
CPNE2-202ENST00000535318 ZMYM3Q14202 1370 aa29.23■■■□□ 2.27
CPNE2-202ENST00000535318 A2ML1A8K2U0 1454 aa29.23■■■□□ 2.27
CPNE2-202ENST00000535318 BCL2L13Q9BXK5 485 aa29.22■■■□□ 2.27
CPNE2-202ENST00000535318 TNNQ9UQP3 1299 aa29.22■■■□□ 2.27
CPNE2-202ENST00000535318 GGNBP2Q9H3C7 697 aa29.22■■■□□ 2.27
CPNE2-202ENST00000535318 MINK1Q8N4C8 1332 aaPredicted RBP29.21■■■□□ 2.27
CPNE2-202ENST00000535318 ABCC11Q96J66 1382 aa29.21■■■□□ 2.27
CPNE2-202ENST00000535318 ESF1Q9H501 851 aaKnown RBP29.21■■■□□ 2.27
CPNE2-202ENST00000535318 SLC4A3P48751 1232 aa29.2■■■□□ 2.27
CPNE2-202ENST00000535318 RLBP1P12271 317 aa29.2■■■□□ 2.26
CPNE2-202ENST00000535318 PRAM1Q96QH2 718 aa29.2■■■□□ 2.26
CPNE2-202ENST00000535318 PTPRMP28827 1452 aa29.19■■■□□ 2.26
CPNE2-202ENST00000535318 NEFMP07197 916 aa29.19■■■□□ 2.26
CPNE2-202ENST00000535318 POGKQ9P215 609 aa29.16■■■□□ 2.26
CPNE2-202ENST00000535318 ALKQ9UM73 1620 aa29.16■■■□□ 2.26
CPNE2-202ENST00000535318 MYH16Q9H6N6 1097 aa29.15■■■□□ 2.26
CPNE2-202ENST00000535318 PPM1GO15355 546 aaPredicted RBP29.15■■■□□ 2.26
CPNE2-202ENST00000535318 YTHDC2Q9H6S0 1430 aaKnown RBP29.15■■■□□ 2.26
CPNE2-202ENST00000535318 U2SURPO15042 1029 aaKnown RBP29.14■■■□□ 2.26
CPNE2-202ENST00000535318 FYB1O15117 783 aa29.14■■■□□ 2.26
CPNE2-202ENST00000535318 NCBP3Q53F19 620 aaKnown RBP29.14■■■□□ 2.25
CPNE2-202ENST00000535318 RIMS2Q9UQ26 1411 aa29.13■■■□□ 2.25
CPNE2-202ENST00000535318 ADGRB2O60241 1585 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms