RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 LRRC59Q96AG4 307 aaKnown RBP22.4■■□□□ 1.18
UBXN1-217ENST00000534176 NHSL1Q5SYE7 1610 aa22.39■■□□□ 1.18
UBXN1-217ENST00000534176 KDM2AQ9Y2K7 1162 aa22.39■■□□□ 1.17
UBXN1-217ENST00000534176 SHPRHQ149N8 1683 aa22.36■■□□□ 1.17
UBXN1-217ENST00000534176 WAPLQ7Z5K2 1190 aa22.36■■□□□ 1.17
UBXN1-217ENST00000534176 ADGRB1O14514 1584 aa22.36■■□□□ 1.17
UBXN1-217ENST00000534176 POGKQ9P215 609 aa22.34■■□□□ 1.17
UBXN1-217ENST00000534176 KIAA1210Q9ULL0 1709 aa22.34■■□□□ 1.17
UBXN1-217ENST00000534176 NPHP3Q7Z494 1330 aa22.33■■□□□ 1.17
UBXN1-217ENST00000534176 EIF3AQ14152 1382 aaKnown RBP22.33■■□□□ 1.17
UBXN1-217ENST00000534176 PRAM1Q96QH2 718 aa22.31■■□□□ 1.16
UBXN1-217ENST00000534176 PLEKHH1Q9ULM0 1364 aa22.3■■□□□ 1.16
UBXN1-217ENST00000534176 ESCO1Q5FWF5 840 aa22.3■■□□□ 1.16
UBXN1-217ENST00000534176 SOS2Q07890 1332 aaPredicted RBP22.3■■□□□ 1.16
UBXN1-217ENST00000534176 ORAI2Q96SN7 254 aa22.29■■□□□ 1.16
UBXN1-217ENST00000534176 ADGRB2O60241 1585 aa22.29■■□□□ 1.16
UBXN1-217ENST00000534176 FMN2Q9NZ56 1722 aa22.28■■□□□ 1.16
UBXN1-217ENST00000534176 KIF1AQ12756 1690 aa22.27■■□□□ 1.16
UBXN1-217ENST00000534176 ILDR2Q71H61 639 aa22.27■■□□□ 1.16
UBXN1-217ENST00000534176 ANKARQ7Z5J8 1434 aa22.27■■□□□ 1.16
UBXN1-217ENST00000534176 TRAK1Q9UPV9 953 aa22.27■■□□□ 1.16
UBXN1-217ENST00000534176 SOCS7O14512 581 aa22.25■■□□□ 1.15
UBXN1-217ENST00000534176 MEX3CQ5U5Q3 659 aaKnown RBP22.25■■□□□ 1.15
UBXN1-217ENST00000534176 PNPLA6Q8IY17 1366 aa22.23■■□□□ 1.15
UBXN1-217ENST00000534176 ZNF772Q68DY9 489 aaPredicted RBP22.21■■□□□ 1.15
UBXN1-217ENST00000534176 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
UBXN1-217ENST00000534176 PSME1Q06323 249 aa22.2■■□□□ 1.14
UBXN1-217ENST00000534176 SAFB2Q14151 953 aaKnown RBP eCLIP22.2■■□□□ 1.14
UBXN1-217ENST00000534176 FOXO3O43524 673 aa22.19■■□□□ 1.14
UBXN1-217ENST00000534176 ARHGEF28Q8N1W1 1705 aaKnown RBP22.19■■□□□ 1.14
UBXN1-217ENST00000534176 PXDNQ92626 1479 aa22.18■■□□□ 1.14
UBXN1-217ENST00000534176 DDX17Q92841 729 aaKnown RBP22.18■■□□□ 1.14
UBXN1-217ENST00000534176 PHF8Q9UPP1 1060 aa22.18■■□□□ 1.14
UBXN1-217ENST00000534176 LRP6O75581 1613 aa22.17■■□□□ 1.14
UBXN1-217ENST00000534176 NUTM2FA1L443 756 aa22.17■■□□□ 1.14
UBXN1-217ENST00000534176 WASLO00401 505 aaPredicted RBP22.17■■□□□ 1.14
UBXN1-217ENST00000534176 NEUROD1Q13562 356 aa22.17■■□□□ 1.14
UBXN1-217ENST00000534176 RGS17Q9UGC6 210 aaPredicted RBP22.17■■□□□ 1.14
UBXN1-217ENST00000534176 TULP4Q9NRJ4 1543 aa22.16■■□□□ 1.14
UBXN1-217ENST00000534176 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
UBXN1-217ENST00000534176 COL22A1Q8NFW1 1626 aaPredicted RBP22.16■■□□□ 1.14
UBXN1-217ENST00000534176 MINK1Q8N4C8 1332 aaPredicted RBP22.15■■□□□ 1.14
UBXN1-217ENST00000534176 NUTM2BA6NNL0 878 aaPredicted RBP22.14■■□□□ 1.13
UBXN1-217ENST00000534176 NUTM2EB1AL46 878 aaPredicted RBP22.14■■□□□ 1.13
UBXN1-217ENST00000534176 NUTM2AQ8IVF1 878 aaPredicted RBP22.14■■□□□ 1.13
UBXN1-217ENST00000534176 TONSLQ96HA7 1378 aa22.12■■□□□ 1.13
UBXN1-217ENST00000534176 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
UBXN1-217ENST00000534176 KRT28Q7Z3Y7 464 aa22.11■■□□□ 1.13
UBXN1-217ENST00000534176 HIRIP3Q9BW71 556 aaPredicted RBP22.11■■□□□ 1.13
UBXN1-217ENST00000534176 ARHGEF10O15013 1369 aa22.11■■□□□ 1.13
UBXN1-217ENST00000534176 GPRASP1Q5JY77 1395 aa22.11■■□□□ 1.13
UBXN1-217ENST00000534176 SPATA31A3Q5VYP0 1347 aa22.1■■□□□ 1.13
UBXN1-217ENST00000534176 CENPJQ9HC77 1338 aaPredicted RBP22.1■■□□□ 1.13
UBXN1-217ENST00000534176 ITSN1Q15811 1721 aa22.1■■□□□ 1.13
UBXN1-217ENST00000534176 NBPF1Q3BBV0 1214 aa22.1■■□□□ 1.13
UBXN1-217ENST00000534176 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
UBXN1-217ENST00000534176 ROCK2O75116 1388 aaKnown RBP22.09■■□□□ 1.13
UBXN1-217ENST00000534176 RGPD8O14715 1765 aaPredicted RBP22.08■■□□□ 1.13
UBXN1-217ENST00000534176 USP32Q8NFA0 1604 aa22.08■■□□□ 1.13
UBXN1-217ENST00000534176 TNS3Q68CZ2 1445 aa22.07■■□□□ 1.12
UBXN1-217ENST00000534176 POTEAQ6S8J7 498 aa22.07■■□□□ 1.12
UBXN1-217ENST00000534176 C8orf37Q96NL8 207 aa22.06■■□□□ 1.12
UBXN1-217ENST00000534176 CLSPNQ9HAW4 1339 aa22.06■■□□□ 1.12
UBXN1-217ENST00000534176 NGLY1Q96IV0 654 aa22.05■■□□□ 1.12
UBXN1-217ENST00000534176 AFF2P51816 1311 aa22.05■■□□□ 1.12
UBXN1-217ENST00000534176 ATP7BP35670 1465 aa22.04■■□□□ 1.12
UBXN1-217ENST00000534176 XPCQ01831 940 aaPredicted RBP22.04■■□□□ 1.12
UBXN1-217ENST00000534176 NGDNQ8NEJ9 315 aaKnown RBP22.04■■□□□ 1.12
UBXN1-217ENST00000534176 NUDT16Q96DE0 195 aaKnown RBP22.04■■□□□ 1.12
UBXN1-217ENST00000534176 CDK19Q9BWU1 502 aa22.04■■□□□ 1.12
UBXN1-217ENST00000534176 CCDC61Q9Y6R9 512 aa22.04■■□□□ 1.12
UBXN1-217ENST00000534176 PMFBP1Q8TBY8 1022 aa22.03■■□□□ 1.12
UBXN1-217ENST00000534176 ADAMTS2O95450 1211 aa22.02■■□□□ 1.12
UBXN1-217ENST00000534176 RXRBP28702 533 aa22.02■■□□□ 1.12
UBXN1-217ENST00000534176 PRR36Q9H6K5 1346 aa22.02■■□□□ 1.12
UBXN1-217ENST00000534176 CDK12Q9NYV4 1490 aaPredicted RBP22.02■■□□□ 1.12
UBXN1-217ENST00000534176 FNBP4Q8N3X1 1017 aaPredicted RBP22.01■■□□□ 1.11
UBXN1-217ENST00000534176 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
UBXN1-217ENST00000534176 EVC2Q86UK5 1308 aa22■■□□□ 1.11
UBXN1-217ENST00000534176 QRICH2Q9H0J4 1663 aa21.99■■□□□ 1.11
UBXN1-217ENST00000534176 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
UBXN1-217ENST00000534176 HAP1P54257 671 aaPredicted RBP21.99■■□□□ 1.11
UBXN1-217ENST00000534176 POLR3AO14802 1390 aaPredicted RBP21.99■■□□□ 1.11
UBXN1-217ENST00000534176 BRD4O60885 1362 aaPredicted RBP21.99■■□□□ 1.11
UBXN1-217ENST00000534176 MARF1Q9Y4F3 1742 aaKnown RBP21.98■■□□□ 1.11
UBXN1-217ENST00000534176 PLEKHG3A1L390 1219 aa21.98■■□□□ 1.11
UBXN1-217ENST00000534176 SRPK2P78362 688 aaKnown RBP21.98■■□□□ 1.11
UBXN1-217ENST00000534176 RALGAPBQ86X10 1494 aa21.97■■□□□ 1.11
UBXN1-217ENST00000534176 RBM6P78332 1123 aaKnown RBP21.97■■□□□ 1.11
UBXN1-217ENST00000534176 USP21Q9UK80 565 aa21.97■■□□□ 1.11
UBXN1-217ENST00000534176 TRPC5Q9UL62 973 aaPredicted RBP21.97■■□□□ 1.11
UBXN1-217ENST00000534176 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
UBXN1-217ENST00000534176 SBNO2Q9Y2G9 1366 aa21.97■■□□□ 1.11
UBXN1-217ENST00000534176 LMOD2Q6P5Q4 547 aa21.96■■□□□ 1.11
UBXN1-217ENST00000534176 CARD11Q9BXL7 1154 aa21.96■■□□□ 1.11
UBXN1-217ENST00000534176 QTRT2Q9H974 415 aaKnown RBP21.96■■□□□ 1.11
UBXN1-217ENST00000534176 TRPM3Q9HCF6 1732 aaPredicted RBP21.95■■□□□ 1.1
UBXN1-217ENST00000534176 NBPF8Q3BBV2 869 aa21.94■■□□□ 1.1
UBXN1-217ENST00000534176 ALS2Q96Q42 1657 aa21.92■■□□□ 1.1
UBXN1-217ENST00000534176 PPIP5K1Q6PFW1 1433 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms