RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 FBLN2P98095 1184 aa4.93□□□□□ -1.62
SOX6-217ENST00000533870 STK31Q9BXU1 1019 aa4.93□□□□□ -1.62
SOX6-217ENST00000533870 WDR33Q9C0J8 1336 aaKnown RBP4.93□□□□□ -1.62
SOX6-217ENST00000533870 TEX35Q5T0J7 233 aa4.93□□□□□ -1.62
SOX6-217ENST00000533870 ZSCAN31Q96LW9 406 aaPredicted RBP4.93□□□□□ -1.62
SOX6-217ENST00000533870 ADAMTS8Q9UP79 889 aa4.93□□□□□ -1.62
SOX6-217ENST00000533870 PDZRN3Q9UPQ7 1066 aa4.93□□□□□ -1.62
SOX6-217ENST00000533870 ABCC5O15440 1437 aa4.93□□□□□ -1.62
SOX6-217ENST00000533870 NKTRP30414 1462 aaKnown RBP4.93□□□□□ -1.62
SOX6-217ENST00000533870 GNAI3P08754 354 aa4.93□□□□□ -1.62
SOX6-217ENST00000533870 FEZ1Q99689 392 aa4.93□□□□□ -1.62
SOX6-217ENST00000533870 GTPBP4Q9BZE4 634 aaKnown RBP4.93□□□□□ -1.62
SOX6-217ENST00000533870 EPRSP07814 1512 aaKnown RBP4.92□□□□□ -1.62
SOX6-217ENST00000533870 ERBINQ96RT1 1412 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 TUBBP07437 444 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 ANAPC15P60006 121 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 TUBB4BP68371 445 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 DUSP27Q5VZP5 1158 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 SMAP1Q8IYB5 467 aaPredicted RBP4.92□□□□□ -1.62
SOX6-217ENST00000533870 JPH4Q96JJ6 628 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 SRCIN1Q9C0H9 1055 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 ANO8Q9HCE9 1232 aaPredicted RBP4.92□□□□□ -1.62
SOX6-217ENST00000533870 TCP11L2Q8N4U5 519 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 CWC15Q9P013 229 aaKnown RBP4.92□□□□□ -1.62
SOX6-217ENST00000533870 KDM2BQ8NHM5 1336 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 ADGRL2O95490 1459 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 ZKSCAN1P17029 563 aaPredicted RBP4.92□□□□□ -1.62
SOX6-217ENST00000533870 AEBP1Q8IUX7 1158 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 ATF7IPQ6VMQ6 1270 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 C9orf84Q5VXU9 1444 aa4.92□□□□□ -1.62
SOX6-217ENST00000533870 TPM1P09493 284 aa4.91□□□□□ -1.62
SOX6-217ENST00000533870 SOS1Q07889 1333 aaPredicted RBP4.91□□□□□ -1.62
SOX6-217ENST00000533870 SNAPC4Q5SXM2 1469 aa4.91□□□□□ -1.62
SOX6-217ENST00000533870 GPATCH3Q96I76 525 aa4.91□□□□□ -1.62
SOX6-217ENST00000533870 ZKSCAN5Q9Y2L8 839 aa4.91□□□□□ -1.62
SOX6-217ENST00000533870 IFT140Q96RY7 1462 aa4.91□□□□□ -1.62
SOX6-217ENST00000533870 HECW1Q76N89 1606 aa4.91□□□□□ -1.62
SOX6-217ENST00000533870 CALRP27797 417 aaKnown RBP4.91□□□□□ -1.62
SOX6-217ENST00000533870 LRRFIP1Q32MZ4 808 aaKnown RBP4.91□□□□□ -1.62
SOX6-217ENST00000533870 NOM1Q5C9Z4 860 aaKnown RBP4.91□□□□□ -1.62
SOX6-217ENST00000533870 NOL10Q9BSC4 688 aaKnown RBP4.91□□□□□ -1.62
SOX6-217ENST00000533870 POGKQ9P215 609 aa4.91□□□□□ -1.62
SOX6-217ENST00000533870 DCAF8L1A6NGE4 600 aa4.9□□□□□ -1.62
SOX6-217ENST00000533870 ARID3CA6NKF2 412 aa4.9□□□□□ -1.62
SOX6-217ENST00000533870 FCHSD2O94868 740 aa4.9□□□□□ -1.62
SOX6-217ENST00000533870 XRCC6P12956 609 aaKnown RBP eCLIP4.9□□□□□ -1.62
SOX6-217ENST00000533870 PTPN23Q9H3S7 1636 aa4.9□□□□□ -1.62
SOX6-217ENST00000533870 HIP1O00291 1037 aa4.9□□□□□ -1.62
SOX6-217ENST00000533870 PER1O15534 1290 aaPredicted RBP4.9□□□□□ -1.62
SOX6-217ENST00000533870 ERCC4Q92889 916 aaPredicted RBP4.9□□□□□ -1.62
SOX6-217ENST00000533870 ESF1Q9H501 851 aaKnown RBP4.9□□□□□ -1.62
SOX6-217ENST00000533870 DIAPH1O60610 1272 aaKnown RBP4.9□□□□□ -1.62
SOX6-217ENST00000533870 CHGAP10645 457 aaKnown RBP4.9□□□□□ -1.62
SOX6-217ENST00000533870 GABPB1Q06547 395 aaPredicted RBP4.9□□□□□ -1.62
SOX6-217ENST00000533870 C8orf34Q49A92 452 aa4.9□□□□□ -1.62
SOX6-217ENST00000533870 CTR9Q6PD62 1173 aa4.9□□□□□ -1.62
SOX6-217ENST00000533870 TBC1D2Q9BYX2 928 aa4.9□□□□□ -1.62
SOX6-217ENST00000533870 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.9□□□□□ -1.62
SOX6-217ENST00000533870 DNMBPQ6XZF7 1577 aa4.9□□□□□ -1.63
SOX6-217ENST00000533870 SYNJ2O15056 1496 aa4.9□□□□□ -1.63
SOX6-217ENST00000533870 U2SURPO15042 1029 aaKnown RBP4.9□□□□□ -1.63
SOX6-217ENST00000533870 USP8P40818 1118 aa4.9□□□□□ -1.63
SOX6-217ENST00000533870 BLMP54132 1417 aaPredicted RBP4.9□□□□□ -1.63
SOX6-217ENST00000533870 FSD2A1L4K1 749 aa4.9□□□□□ -1.63
SOX6-217ENST00000533870 TNNT3P45378 269 aaPredicted RBP4.9□□□□□ -1.63
SOX6-217ENST00000533870 INTS4Q96HW7 963 aaKnown RBP4.9□□□□□ -1.63
SOX6-217ENST00000533870 TSPY26PQ9H489 355 aa4.9□□□□□ -1.63
SOX6-217ENST00000533870 USP25Q9UHP3 1055 aa4.9□□□□□ -1.63
SOX6-217ENST00000533870 TOPBP1Q92547 1522 aa4.9□□□□□ -1.63
SOX6-217ENST00000533870 CALCOCO1Q9P1Z2 691 aa4.9□□□□□ -1.63
SOX6-217ENST00000533870 SCAF11Q99590 1463 aaKnown RBP4.9□□□□□ -1.63
SOX6-217ENST00000533870 RARSP54136 660 aaKnown RBP4.89□□□□□ -1.63
SOX6-217ENST00000533870 NEUROD2Q15784 382 aa4.89□□□□□ -1.63
SOX6-217ENST00000533870 PPP1R9BQ96SB3 815 aa4.89□□□□□ -1.63
SOX6-217ENST00000533870 BIVM-ERCC5R4GMW8 1640 aa4.89□□□□□ -1.63
SOX6-217ENST00000533870 ZNF445P59923 1031 aa4.89□□□□□ -1.63
SOX6-217ENST00000533870 FAM107BQ9H098 131 aa4.89□□□□□ -1.63
SOX6-217ENST00000533870 STAG3Q9UJ98 1225 aa4.89□□□□□ -1.63
SOX6-217ENST00000533870 NOL7Q9UMY1 257 aaKnown RBP4.89□□□□□ -1.63
SOX6-217ENST00000533870 ZNF500O60304 480 aaPredicted RBP4.89□□□□□ -1.63
SOX6-217ENST00000533870 PIP4K2AP48426 406 aaPredicted RBP4.89□□□□□ -1.63
SOX6-217ENST00000533870 UTP14CQ5TAP6 766 aaKnown RBP4.89□□□□□ -1.63
SOX6-217ENST00000533870 FAM13BQ9NYF5 915 aa4.89□□□□□ -1.63
SOX6-217ENST00000533870 KIF24Q5T7B8 1368 aa4.89□□□□□ -1.63
SOX6-217ENST00000533870 SCAND2PQ9GZW5 306 aaPredicted RBP4.89□□□□□ -1.63
SOX6-217ENST00000533870 NAT10Q9H0A0 1025 aaKnown RBP4.89□□□□□ -1.63
SOX6-217ENST00000533870 GZF1Q9H116 711 aaPredicted RBP4.89□□□□□ -1.63
SOX6-217ENST00000533870 CCDC192P0DO97 292 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 SYCP1Q15431 976 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 CPLX2Q6PUV4 134 aaKnown RBP4.88□□□□□ -1.63
SOX6-217ENST00000533870 CCDC112Q8NEF3 446 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 SH2B1Q9NRF2 756 aaPredicted RBP4.88□□□□□ -1.63
SOX6-217ENST00000533870 SLC52A1Q9NWF4 448 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 ERC2O15083 957 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 CDCA7LQ96GN5 454 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 SRRTQ9BXP5 876 aaKnown RBP4.88□□□□□ -1.63
SOX6-217ENST00000533870 GBP3Q9H0R5 595 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 UGGT2Q9NYU1 1516 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 ANKRD1Q15327 319 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 CCDC184Q52MB2 194 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms