RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 ZMYM3Q14202 1370 aa21.43■■□□□ 1.02
CTSB-228ENST00000533455 OSCARQ8IYS5 282 aa21.43■■□□□ 1.02
CTSB-228ENST00000533455 NSD3Q9BZ95 1437 aa21.42■■□□□ 1.02
CTSB-228ENST00000533455 PHF23Q9BUL5 403 aaPredicted RBP21.41■■□□□ 1.02
CTSB-228ENST00000533455 NLRP1Q9C000 1473 aa21.41■■□□□ 1.02
CTSB-228ENST00000533455 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
CTSB-228ENST00000533455 ADGRB1O14514 1584 aa21.4■■□□□ 1.02
CTSB-228ENST00000533455 NOS1P29475 1434 aa21.4■■□□□ 1.02
CTSB-228ENST00000533455 RUNDC1Q96C34 613 aa21.39■■□□□ 1.02
CTSB-228ENST00000533455 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
CTSB-228ENST00000533455 PANK1Q8TE04 598 aa21.38■■□□□ 1.01
CTSB-228ENST00000533455 COG6Q9Y2V7 657 aa21.38■■□□□ 1.01
CTSB-228ENST00000533455 ZNF518AQ6AHZ1 1483 aa21.37■■□□□ 1.01
CTSB-228ENST00000533455 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
CTSB-228ENST00000533455 FRAT2O75474 233 aaPredicted RBP21.36■■□□□ 1.01
CTSB-228ENST00000533455 RARSP54136 660 aaKnown RBP21.36■■□□□ 1.01
CTSB-228ENST00000533455 MORC1Q86VD1 984 aa21.36■■□□□ 1.01
CTSB-228ENST00000533455 WDR63Q8IWG1 891 aa21.36■■□□□ 1.01
CTSB-228ENST00000533455 PMFBP1Q8TBY8 1022 aa21.36■■□□□ 1.01
CTSB-228ENST00000533455 CCDC27Q2M243 656 aa21.35■■□□□ 1.01
CTSB-228ENST00000533455 ADGRB2O60241 1585 aa21.34■■□□□ 1.01
CTSB-228ENST00000533455 BRPF3Q9ULD4 1205 aa21.33■■□□□ 1.01
CTSB-228ENST00000533455 TCP11L2Q8N4U5 519 aa21.33■■□□□ 1
CTSB-228ENST00000533455 BECN1Q14457 450 aa21.32■■□□□ 1
CTSB-228ENST00000533455 C14orf93Q9H972 538 aaKnown RBP21.32■■□□□ 1
CTSB-228ENST00000533455 RTN4Q9NQC3 1192 aaKnown RBP21.32■■□□□ 1
CTSB-228ENST00000533455 SEC24BO95487 1268 aa21.31■■□□□ 1
CTSB-228ENST00000533455 NSD2O96028 1365 aa21.3■■□□□ 1
CTSB-228ENST00000533455 ARHGEF28Q8N1W1 1705 aaKnown RBP21.3■■□□□ 1
CTSB-228ENST00000533455 PUS7Q96PZ0 661 aaKnown RBP21.29■■□□□ 1
CTSB-228ENST00000533455 HECW2Q9P2P5 1572 aa21.29■■□□□ 1
CTSB-228ENST00000533455 GLI2P10070 1586 aa21.29■■□□□ 1
CTSB-228ENST00000533455 NPATQ14207 1427 aa21.28■■□□□ 1
CTSB-228ENST00000533455 SLC12A5Q9H2X9 1139 aa21.28■■□□□ 1
CTSB-228ENST00000533455 CFAP53Q96M91 514 aa21.28■■□□□ 1
CTSB-228ENST00000533455 RRP7AQ9Y3A4 280 aaKnown RBP21.28■■□□□ 1
CTSB-228ENST00000533455 PCDHB15Q9Y5E8 787 aa21.28■■□□□ 1
CTSB-228ENST00000533455 RPGRIP1LQ68CZ1 1315 aa21.27■■□□□ 1
CTSB-228ENST00000533455 RLBP1P12271 317 aa21.27■■□□□ 1
CTSB-228ENST00000533455 TRAK1Q9UPV9 953 aa21.27■■□□□ 1
CTSB-228ENST00000533455 TULP4Q9NRJ4 1543 aa21.26■□□□□ 0.99
CTSB-228ENST00000533455 FRMPD1Q5SYB0 1578 aa21.26■□□□□ 0.99
CTSB-228ENST00000533455 NEUROD2Q15784 382 aa21.26■□□□□ 0.99
CTSB-228ENST00000533455 MTHFSP49914 203 aa21.25■□□□□ 0.99
CTSB-228ENST00000533455 ANKRD36BQ8N2N9 1353 aa21.25■□□□□ 0.99
CTSB-228ENST00000533455 CFAP74Q9C0B2 1584 aa21.24■□□□□ 0.99
CTSB-228ENST00000533455 MYH16Q9H6N6 1097 aa21.24■□□□□ 0.99
CTSB-228ENST00000533455 PDZRN3Q9UPQ7 1066 aa21.24■□□□□ 0.99
CTSB-228ENST00000533455 CAMSAP1Q5T5Y3 1602 aa21.24■□□□□ 0.99
CTSB-228ENST00000533455 TBC1D32Q96NH3 1257 aa21.24■□□□□ 0.99
CTSB-228ENST00000533455 RWDD1Q9H446 243 aaPredicted RBP21.24■□□□□ 0.99
CTSB-228ENST00000533455 TNNQ9UQP3 1299 aa21.24■□□□□ 0.99
CTSB-228ENST00000533455 PIK3C2BO00750 1634 aa21.23■□□□□ 0.99
CTSB-228ENST00000533455 ASXL2Q76L83 1435 aa21.23■□□□□ 0.99
CTSB-228ENST00000533455 TNNT2P45379 298 aaPredicted RBP21.23■□□□□ 0.99
CTSB-228ENST00000533455 ANO8Q9HCE9 1232 aaPredicted RBP21.23■□□□□ 0.99
CTSB-228ENST00000533455 CFAP65Q6ZU64 1925 aaKnown RBP21.23■□□□□ 0.99
CTSB-228ENST00000533455 CT47B1P0C2W7 299 aaPredicted RBP21.22■□□□□ 0.99
CTSB-228ENST00000533455 UPF2Q9HAU5 1272 aaKnown RBP21.22■□□□□ 0.99
CTSB-228ENST00000533455 ANTXR1Q9H6X2 564 aa21.22■□□□□ 0.99
CTSB-228ENST00000533455 ABCC3O15438 1527 aa21.21■□□□□ 0.99
CTSB-228ENST00000533455 MVPQ14764 893 aaKnown RBP21.21■□□□□ 0.99
CTSB-228ENST00000533455 MLH3Q9UHC1 1453 aa21.2■□□□□ 0.98
CTSB-228ENST00000533455 CHGAP10645 457 aaKnown RBP21.2■□□□□ 0.98
CTSB-228ENST00000533455 ANKRD26Q9UPS8 1709 aa21.19■□□□□ 0.98
CTSB-228ENST00000533455 SIGLEC1Q9BZZ2 1709 aa21.19■□□□□ 0.98
CTSB-228ENST00000533455 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
CTSB-228ENST00000533455 EVC2Q86UK5 1308 aa21.19■□□□□ 0.98
CTSB-228ENST00000533455 POGZQ7Z3K3 1410 aa21.18■□□□□ 0.98
CTSB-228ENST00000533455 BCL2L13Q9BXK5 485 aa21.18■□□□□ 0.98
CTSB-228ENST00000533455 ZKSCAN2Q63HK3 967 aa21.17■□□□□ 0.98
CTSB-228ENST00000533455 TMEM132EQ6IEE7 984 aa21.17■□□□□ 0.98
CTSB-228ENST00000533455 COL3A1P02461 1466 aaPredicted RBP21.16■□□□□ 0.98
CTSB-228ENST00000533455 TBC1D2Q9BYX2 928 aa21.15■□□□□ 0.98
CTSB-228ENST00000533455 DZIP1LQ8IYY4 767 aaKnown RBP21.14■□□□□ 0.98
CTSB-228ENST00000533455 SLKQ9H2G2 1235 aaPredicted RBP21.14■□□□□ 0.98
CTSB-228ENST00000533455 ABCC11Q96J66 1382 aa21.14■□□□□ 0.97
CTSB-228ENST00000533455 U2AF1L5P0DN76 240 aaPredicted RBP21.14■□□□□ 0.97
CTSB-228ENST00000533455 U2AF1Q01081 240 aaKnown RBP eCLIP21.14■□□□□ 0.97
CTSB-228ENST00000533455 POGKQ9P215 609 aa21.14■□□□□ 0.97
CTSB-228ENST00000533455 CD109Q6YHK3 1445 aa21.13■□□□□ 0.97
CTSB-228ENST00000533455 HDAC1Q13547 482 aaPredicted RBP21.12■□□□□ 0.97
CTSB-228ENST00000533455 FAM43AQ8N2R8 423 aa21.12■□□□□ 0.97
CTSB-228ENST00000533455 MED14O60244 1454 aa21.11■□□□□ 0.97
CTSB-228ENST00000533455 FTSJ3Q8IY81 847 aaKnown RBP21.11■□□□□ 0.97
CTSB-228ENST00000533455 CLTCQ00610 1675 aaKnown RBP21.11■□□□□ 0.97
CTSB-228ENST00000533455 PLEKHF1Q96S99 279 aa21.11■□□□□ 0.97
CTSB-228ENST00000533455 IL16Q14005 1332 aa21.1■□□□□ 0.97
CTSB-228ENST00000533455 ZFYVE9O95405 1425 aa21.09■□□□□ 0.97
CTSB-228ENST00000533455 A0A1W2PP64 1363 aa21.09■□□□□ 0.97
CTSB-228ENST00000533455 VGFO15240 615 aaPredicted RBP21.09■□□□□ 0.97
CTSB-228ENST00000533455 L1TD1Q5T7N2 865 aaKnown RBP21.08■□□□□ 0.97
CTSB-228ENST00000533455 DDX19BQ9UMR2 479 aa21.08■□□□□ 0.97
CTSB-228ENST00000533455 SMC4Q9NTJ3 1288 aa21.07■□□□□ 0.96
CTSB-228ENST00000533455 TRIM27P14373 513 aa21.07■□□□□ 0.96
CTSB-228ENST00000533455 TMPOP42166 694 aaKnown RBP21.07■□□□□ 0.96
CTSB-228ENST00000533455 EXOSC9Q06265 439 aaKnown RBP21.07■□□□□ 0.96
CTSB-228ENST00000533455 GGT6Q6P531 493 aa21.07■□□□□ 0.96
CTSB-228ENST00000533455 TSR2Q969E8 191 aaKnown RBP21.07■□□□□ 0.96
CTSB-228ENST00000533455 TRIM35Q9UPQ4 493 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms