RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 NHSL1Q5SYE7 1610 aa44.17■■■■■ 4.66
SSSCA1-207ENST00000533115 PLEKHH1Q9ULM0 1364 aa44.17■■■■■ 4.66
SSSCA1-207ENST00000533115 ORAI2Q96SN7 254 aa44.1■■■■■ 4.65
SSSCA1-207ENST00000533115 DDX17Q92841 729 aaKnown RBP44.08■■■■■ 4.65
SSSCA1-207ENST00000533115 ADGRB1O14514 1584 aa44.08■■■■■ 4.65
SSSCA1-207ENST00000533115 SHPRHQ149N8 1683 aa44.07■■■■■ 4.65
SSSCA1-207ENST00000533115 SPATA31A6Q5VVP1 1343 aa44.06■■■■■ 4.64
SSSCA1-207ENST00000533115 RGS17Q9UGC6 210 aaPredicted RBP44.03■■■■■ 4.64
SSSCA1-207ENST00000533115 LRRC59Q96AG4 307 aaKnown RBP44.02■■■■■ 4.64
SSSCA1-207ENST00000533115 DLC1Q96QB1 1528 aa44.02■■■■■ 4.64
SSSCA1-207ENST00000533115 PRAM1Q96QH2 718 aa44.01■■■■■ 4.64
SSSCA1-207ENST00000533115 SOCS7O14512 581 aa44■■■■■ 4.63
SSSCA1-207ENST00000533115 ESCO1Q5FWF5 840 aa43.98■■■■■ 4.63
SSSCA1-207ENST00000533115 LRP6O75581 1613 aa43.95■■■■■ 4.63
SSSCA1-207ENST00000533115 NUTM2FA1L443 756 aa43.95■■■■■ 4.63
SSSCA1-207ENST00000533115 POGKQ9P215 609 aa43.95■■■■■ 4.63
SSSCA1-207ENST00000533115 TRAK1Q9UPV9 953 aa43.95■■■■■ 4.63
SSSCA1-207ENST00000533115 FMN2Q9NZ56 1722 aa43.94■■■■■ 4.62
SSSCA1-207ENST00000533115 SAFB2Q14151 953 aaKnown RBP eCLIP43.94■■■■■ 4.62
SSSCA1-207ENST00000533115 SOS2Q07890 1332 aaPredicted RBP43.93■■■■■ 4.62
SSSCA1-207ENST00000533115 TRIM26Q12899 539 aaPredicted RBP43.89■■■■■ 4.62
SSSCA1-207ENST00000533115 PNPLA6Q8IY17 1366 aa43.88■■■■■ 4.61
SSSCA1-207ENST00000533115 MEX3CQ5U5Q3 659 aaKnown RBP43.87■■■■■ 4.61
SSSCA1-207ENST00000533115 NPHP3Q7Z494 1330 aa43.86■■■■■ 4.61
SSSCA1-207ENST00000533115 NUTM2BA6NNL0 878 aaPredicted RBP43.85■■■■■ 4.61
SSSCA1-207ENST00000533115 NUTM2EB1AL46 878 aaPredicted RBP43.85■■■■■ 4.61
SSSCA1-207ENST00000533115 NUTM2AQ8IVF1 878 aaPredicted RBP43.85■■■■■ 4.61
SSSCA1-207ENST00000533115 SIN3AQ96ST3 1273 aa43.83■■■■■ 4.61
SSSCA1-207ENST00000533115 KIAA1210Q9ULL0 1709 aa43.82■■■■■ 4.6
SSSCA1-207ENST00000533115 FOXO3O43524 673 aa43.81■■■■■ 4.6
SSSCA1-207ENST00000533115 POTEAQ6S8J7 498 aa43.8■■■■■ 4.6
SSSCA1-207ENST00000533115 ADGRB2O60241 1585 aa43.8■■■■■ 4.6
SSSCA1-207ENST00000533115 PXDNQ92626 1479 aa43.77■■■■■ 4.6
SSSCA1-207ENST00000533115 L3MBTL2Q969R5 705 aa43.77■■■■■ 4.6
SSSCA1-207ENST00000533115 KIF1AQ12756 1690 aa43.76■■■■■ 4.6
SSSCA1-207ENST00000533115 MINK1Q8N4C8 1332 aaPredicted RBP43.74■■■■■ 4.59
SSSCA1-207ENST00000533115 ARHGEF28Q8N1W1 1705 aaKnown RBP43.74■■■■■ 4.59
SSSCA1-207ENST00000533115 NEUROD1Q13562 356 aa43.74■■■■■ 4.59
SSSCA1-207ENST00000533115 HIRIP3Q9BW71 556 aaPredicted RBP43.74■■■■■ 4.59
SSSCA1-207ENST00000533115 RGPD8O14715 1765 aaPredicted RBP43.74■■■■■ 4.59
SSSCA1-207ENST00000533115 XPCQ01831 940 aaPredicted RBP43.73■■■■■ 4.59
SSSCA1-207ENST00000533115 NBPF1Q3BBV0 1214 aa43.7■■■■■ 4.59
SSSCA1-207ENST00000533115 PHF8Q9UPP1 1060 aa43.7■■■■■ 4.59
SSSCA1-207ENST00000533115 ANKARQ7Z5J8 1434 aa43.7■■■■■ 4.59
SSSCA1-207ENST00000533115 ZNF772Q68DY9 489 aaPredicted RBP43.67■■■■■ 4.58
SSSCA1-207ENST00000533115 USP32Q8NFA0 1604 aa43.66■■■■■ 4.58
SSSCA1-207ENST00000533115 COL22A1Q8NFW1 1626 aaPredicted RBP43.65■■■■■ 4.58
SSSCA1-207ENST00000533115 WASLO00401 505 aaPredicted RBP43.64■■■■■ 4.58
SSSCA1-207ENST00000533115 EIF3AQ14152 1382 aaKnown RBP43.64■■■■■ 4.58
SSSCA1-207ENST00000533115 KRT28Q7Z3Y7 464 aa43.62■■■■■ 4.57
SSSCA1-207ENST00000533115 TULP4Q9NRJ4 1543 aa43.59■■■■■ 4.57
SSSCA1-207ENST00000533115 C8orf37Q96NL8 207 aa43.59■■■■■ 4.57
SSSCA1-207ENST00000533115 AFF2P51816 1311 aa43.58■■■■■ 4.57
SSSCA1-207ENST00000533115 ADAMTS2O95450 1211 aa43.58■■■■■ 4.57
SSSCA1-207ENST00000533115 SPATA31A3Q5VYP0 1347 aa43.56■■■■■ 4.56
SSSCA1-207ENST00000533115 PRR36Q9H6K5 1346 aa43.56■■■■■ 4.56
SSSCA1-207ENST00000533115 PMFBP1Q8TBY8 1022 aa43.56■■■■■ 4.56
SSSCA1-207ENST00000533115 PSME1Q06323 249 aa43.55■■■■■ 4.56
SSSCA1-207ENST00000533115 TRPM1Q7Z4N2 1603 aa43.49■■■■■ 4.55
SSSCA1-207ENST00000533115 NGLY1Q96IV0 654 aa43.49■■■■■ 4.55
SSSCA1-207ENST00000533115 SBNO1A3KN83 1393 aa43.47■■■■■ 4.55
SSSCA1-207ENST00000533115 TNS3Q68CZ2 1445 aa43.47■■■■■ 4.55
SSSCA1-207ENST00000533115 CDK19Q9BWU1 502 aa43.46■■■■■ 4.55
SSSCA1-207ENST00000533115 CENPJQ9HC77 1338 aaPredicted RBP43.45■■■■■ 4.55
SSSCA1-207ENST00000533115 NUDT16Q96DE0 195 aaKnown RBP43.44■■■■■ 4.54
SSSCA1-207ENST00000533115 ATP7BP35670 1465 aa43.43■■■■■ 4.54
SSSCA1-207ENST00000533115 RXRBP28702 533 aa43.4■■■■■ 4.54
SSSCA1-207ENST00000533115 ROCK2O75116 1388 aaKnown RBP43.4■■■■■ 4.54
SSSCA1-207ENST00000533115 GPRASP1Q5JY77 1395 aa43.39■■■■■ 4.54
SSSCA1-207ENST00000533115 ITSN1Q15811 1721 aa43.39■■■■■ 4.54
SSSCA1-207ENST00000533115 NBPF8Q3BBV2 869 aa43.37■■■■■ 4.53
SSSCA1-207ENST00000533115 NGDNQ8NEJ9 315 aaKnown RBP43.37■■■■■ 4.53
SSSCA1-207ENST00000533115 QTRT2Q9H974 415 aaKnown RBP43.37■■■■■ 4.53
SSSCA1-207ENST00000533115 TONSLQ96HA7 1378 aa43.37■■■■■ 4.53
SSSCA1-207ENST00000533115 LMOD2Q6P5Q4 547 aa43.36■■■■■ 4.53
SSSCA1-207ENST00000533115 FNBP4Q8N3X1 1017 aaPredicted RBP43.36■■■■■ 4.53
SSSCA1-207ENST00000533115 ARHGEF10O15013 1369 aa43.36■■■■■ 4.53
SSSCA1-207ENST00000533115 MARF1Q9Y4F3 1742 aaKnown RBP43.36■■■■■ 4.53
SSSCA1-207ENST00000533115 TRPM3Q9HCF6 1732 aaPredicted RBP43.34■■■■■ 4.53
SSSCA1-207ENST00000533115 QRICH2Q9H0J4 1663 aa43.33■■■■■ 4.53
SSSCA1-207ENST00000533115 USP21Q9UK80 565 aa43.33■■■■■ 4.53
SSSCA1-207ENST00000533115 CCDC61Q9Y6R9 512 aa43.3■■■■■ 4.52
SSSCA1-207ENST00000533115 TOPAZ1Q8N9V7 1692 aa43.28■■■■■ 4.52
SSSCA1-207ENST00000533115 CABLES1Q8TDN4 633 aa43.28■■■■■ 4.52
SSSCA1-207ENST00000533115 HAP1P54257 671 aaPredicted RBP43.27■■■■■ 4.52
SSSCA1-207ENST00000533115 RBM6P78332 1123 aaKnown RBP43.27■■■■■ 4.52
SSSCA1-207ENST00000533115 SRPK2P78362 688 aaKnown RBP43.27■■■■■ 4.52
SSSCA1-207ENST00000533115 CDK12Q9NYV4 1490 aaPredicted RBP43.26■■■■■ 4.52
SSSCA1-207ENST00000533115 ALS2Q96Q42 1657 aa43.24■■■■■ 4.51
SSSCA1-207ENST00000533115 PLEKHG5O94827 1062 aa43.24■■■■■ 4.51
SSSCA1-207ENST00000533115 TRPC5Q9UL62 973 aaPredicted RBP43.24■■■■■ 4.51
SSSCA1-207ENST00000533115 PLEKHG3A1L390 1219 aa43.23■■■■■ 4.51
SSSCA1-207ENST00000533115 POLR3AO14802 1390 aaPredicted RBP43.22■■■■■ 4.51
SSSCA1-207ENST00000533115 CABP2Q9NPB3 220 aa43.22■■■■■ 4.51
SSSCA1-207ENST00000533115 ABCA3Q99758 1704 aa43.21■■■■■ 4.51
SSSCA1-207ENST00000533115 ACEP12821 1306 aa43.21■■■■■ 4.51
SSSCA1-207ENST00000533115 BCL9LQ86UU0 1499 aa43.2■■■■■ 4.51
SSSCA1-207ENST00000533115 PAK3O75914 559 aaPredicted RBP43.2■■■■■ 4.51
SSSCA1-207ENST00000533115 ATRNO75882 1429 aa43.19■■■■■ 4.5
SSSCA1-207ENST00000533115 RALGAPBQ86X10 1494 aa43.16■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms