RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 MYOM3Q5VTT5 1437 aa3.24□□□□□ -1.89
KNL1-211ENST00000533001 SOS2Q07890 1332 aaPredicted RBP3.24□□□□□ -1.89
KNL1-211ENST00000533001 DMXL1Q9Y485 3027 aa3.24□□□□□ -1.89
KNL1-211ENST00000533001 ADGRB2O60241 1585 aa3.24□□□□□ -1.89
KNL1-211ENST00000533001 PNPLA6Q8IY17 1366 aa3.24□□□□□ -1.89
KNL1-211ENST00000533001 MTUS2Q5JR59 1369 aa3.23□□□□□ -1.89
KNL1-211ENST00000533001 PLEKHG1Q9ULL1 1385 aa3.23□□□□□ -1.89
KNL1-211ENST00000533001 TOGARAM1Q9Y4F4 1720 aa3.23□□□□□ -1.89
KNL1-211ENST00000533001 TTBK1Q5TCY1 1321 aaPredicted RBP3.23□□□□□ -1.89
KNL1-211ENST00000533001 MLECQ14165 292 aa3.23□□□□□ -1.89
KNL1-211ENST00000533001 BRCA1P38398 1863 aaKnown RBP3.23□□□□□ -1.89
KNL1-211ENST00000533001 FNBP4Q8N3X1 1017 aaPredicted RBP3.23□□□□□ -1.89
KNL1-211ENST00000533001 C1orf167Q5SNV9 1468 aa3.22□□□□□ -1.89
KNL1-211ENST00000533001 ROBO2Q9HCK4 1378 aa3.22□□□□□ -1.89
KNL1-211ENST00000533001 SPAG9O60271 1321 aaKnown RBP3.22□□□□□ -1.89
KNL1-211ENST00000533001 PTCH1Q13635 1447 aa3.22□□□□□ -1.89
KNL1-211ENST00000533001 BRINP3Q76B58 766 aa3.22□□□□□ -1.89
KNL1-211ENST00000533001 RBM33Q96EV2 1170 aaKnown RBP3.22□□□□□ -1.89
KNL1-211ENST00000533001 DMRT2Q9Y5R5 561 aa3.22□□□□□ -1.89
KNL1-211ENST00000533001 KCNA6P17658 529 aa3.21□□□□□ -1.89
KNL1-211ENST00000533001 QSER1Q2KHR3 1735 aa3.21□□□□□ -1.89
KNL1-211ENST00000533001 MAP2P11137 1827 aaKnown RBP3.21□□□□□ -1.89
KNL1-211ENST00000533001 SCAF1Q9H7N4 1312 aaKnown RBP3.21□□□□□ -1.89
KNL1-211ENST00000533001 ADAMTS7Q9UKP4 1686 aa3.21□□□□□ -1.9
KNL1-211ENST00000533001 SSH2Q76I76 1423 aa3.21□□□□□ -1.9
KNL1-211ENST00000533001 TRPM1Q7Z4N2 1603 aa3.21□□□□□ -1.9
KNL1-211ENST00000533001 BDP1A6H8Y1 2624 aa3.21□□□□□ -1.9
KNL1-211ENST00000533001 PIK3R4Q99570 1358 aa3.21□□□□□ -1.9
KNL1-211ENST00000533001 NRKQ7Z2Y5 1582 aa3.21□□□□□ -1.9
KNL1-211ENST00000533001 UBAP1LF5GYI3 381 aa3.21□□□□□ -1.9
KNL1-211ENST00000533001 DLC1Q96QB1 1528 aa3.21□□□□□ -1.9
KNL1-211ENST00000533001 CEP290O15078 2479 aa3.2□□□□□ -1.9
KNL1-211ENST00000533001 PARP4Q9UKK3 1724 aaKnown RBP3.2□□□□□ -1.9
KNL1-211ENST00000533001 FREM2Q5SZK8 3169 aa3.2□□□□□ -1.9
KNL1-211ENST00000533001 CHD4Q14839 1912 aa3.2□□□□□ -1.9
KNL1-211ENST00000533001 ADGRL3Q9HAR2 1447 aa3.2□□□□□ -1.9
KNL1-211ENST00000533001 SGIP1Q9BQI5 828 aa3.2□□□□□ -1.9
KNL1-211ENST00000533001 RGPD5Q99666 1765 aa3.2□□□□□ -1.9
KNL1-211ENST00000533001 NAIPQ13075 1403 aa3.2□□□□□ -1.9
KNL1-211ENST00000533001 ARHGEF28Q8N1W1 1705 aaKnown RBP3.19□□□□□ -1.9
KNL1-211ENST00000533001 TBX22Q9Y458 520 aa3.19□□□□□ -1.9
KNL1-211ENST00000533001 KIF15Q9NS87 1388 aa3.19□□□□□ -1.9
KNL1-211ENST00000533001 LAMA1P25391 3075 aa3.19□□□□□ -1.9
KNL1-211ENST00000533001 JCADQ9P266 1359 aa3.18□□□□□ -1.9
KNL1-211ENST00000533001 TTC28Q96AY4 2481 aa3.18□□□□□ -1.9
KNL1-211ENST00000533001 PDE4DIPQ5VU43 2346 aa3.18□□□□□ -1.9
KNL1-211ENST00000533001 SLAIN2Q9P270 581 aa3.18□□□□□ -1.9
KNL1-211ENST00000533001 FAM208AQ9UK61 1670 aaKnown RBP3.17□□□□□ -1.9
KNL1-211ENST00000533001 LY75O60449 1722 aa3.17□□□□□ -1.9
KNL1-211ENST00000533001 RALGAPBQ86X10 1494 aa3.17□□□□□ -1.9
KNL1-211ENST00000533001 LRRC37A3O60309 1634 aa3.17□□□□□ -1.9
KNL1-211ENST00000533001 PIK3C2GO75747 1445 aa3.17□□□□□ -1.9
KNL1-211ENST00000533001 TAF1LQ8IZX4 1826 aa3.17□□□□□ -1.9
KNL1-211ENST00000533001 KIF13BQ9NQT8 1826 aa3.17□□□□□ -1.9
KNL1-211ENST00000533001 BPTFQ12830 3046 aa3.17□□□□□ -1.9
KNL1-211ENST00000533001 ROCK1Q13464 1354 aa3.17□□□□□ -1.9
KNL1-211ENST00000533001 LAMA5O15230 3695 aa3.17□□□□□ -1.9
KNL1-211ENST00000533001 DDX17Q92841 729 aaKnown RBP3.16□□□□□ -1.9
KNL1-211ENST00000533001 PIK3C2AO00443 1686 aa3.16□□□□□ -1.9
KNL1-211ENST00000533001 SMG1Q96Q15 3661 aaKnown RBP3.16□□□□□ -1.9
KNL1-211ENST00000533001 KIF3BO15066 747 aa3.16□□□□□ -1.9
KNL1-211ENST00000533001 SLC26A8Q96RN1 970 aa3.16□□□□□ -1.9
KNL1-211ENST00000533001 PLEKHH1Q9ULM0 1364 aa3.16□□□□□ -1.9
KNL1-211ENST00000533001 PROM2Q8N271 834 aa3.16□□□□□ -1.9
KNL1-211ENST00000533001 FRYQ5TBA9 3013 aa3.16□□□□□ -1.9
KNL1-211ENST00000533001 RIMS2Q9UQ26 1411 aa3.16□□□□□ -1.9
KNL1-211ENST00000533001 MYOM1P52179 1685 aa3.15□□□□□ -1.9
KNL1-211ENST00000533001 PDGFDQ9GZP0 370 aaPredicted RBP3.15□□□□□ -1.9
KNL1-211ENST00000533001 ATP7BP35670 1465 aa3.15□□□□□ -1.91
KNL1-211ENST00000533001 GGT6Q6P531 493 aa3.15□□□□□ -1.91
KNL1-211ENST00000533001 PTF1AQ7RTS3 328 aa3.15□□□□□ -1.91
KNL1-211ENST00000533001 CCNB3Q8WWL7 1395 aa3.15□□□□□ -1.91
KNL1-211ENST00000533001 KIF1BO60333 1816 aa3.15□□□□□ -1.91
KNL1-211ENST00000533001 RRBP1Q9P2E9 1410 aaKnown RBP3.15□□□□□ -1.91
KNL1-211ENST00000533001 ARID4BQ4LE39 1312 aaPredicted RBP3.15□□□□□ -1.91
KNL1-211ENST00000533001 CD163L1Q9NR16 1453 aa3.15□□□□□ -1.91
KNL1-211ENST00000533001 CELSR3Q9NYQ7 3312 aa3.15□□□□□ -1.91
KNL1-211ENST00000533001 SPATA31A6Q5VVP1 1343 aa3.15□□□□□ -1.91
KNL1-211ENST00000533001 PRR36Q9H6K5 1346 aa3.15□□□□□ -1.91
KNL1-211ENST00000533001 RGPD1P0DJD0 1748 aa3.14□□□□□ -1.91
KNL1-211ENST00000533001 BCL9O00512 1426 aa3.14□□□□□ -1.91
KNL1-211ENST00000533001 ANKRD50Q9ULJ7 1429 aa3.14□□□□□ -1.91
KNL1-211ENST00000533001 CFDP1Q9UEE9 299 aaPredicted RBP3.14□□□□□ -1.91
KNL1-211ENST00000533001 ANKLE2Q86XL3 938 aa3.14□□□□□ -1.91
KNL1-211ENST00000533001 NFAT5O94916 1531 aa3.14□□□□□ -1.91
KNL1-211ENST00000533001 TOM1O60784 492 aa3.13□□□□□ -1.91
KNL1-211ENST00000533001 THEMISQ8N1K5 641 aaPredicted RBP3.13□□□□□ -1.91
KNL1-211ENST00000533001 ORAI2Q96SN7 254 aa3.13□□□□□ -1.91
KNL1-211ENST00000533001 DHX57Q6P158 1386 aaKnown RBP3.13□□□□□ -1.91
KNL1-211ENST00000533001 HFM1A2PYH4 1435 aa3.13□□□□□ -1.91
KNL1-211ENST00000533001 ANKRD26Q9UPS8 1709 aa3.13□□□□□ -1.91
KNL1-211ENST00000533001 AKAP12Q02952 1782 aa3.13□□□□□ -1.91
KNL1-211ENST00000533001 MYH14Q7Z406 1995 aaKnown RBP3.13□□□□□ -1.91
KNL1-211ENST00000533001 SLIT3O75094 1523 aa3.13□□□□□ -1.91
KNL1-211ENST00000533001 RSPH4AQ5TD94 716 aa3.13□□□□□ -1.91
KNL1-211ENST00000533001 CICQ96RK0 1608 aaPredicted RBP3.13□□□□□ -1.91
KNL1-211ENST00000533001 SBF1O95248 1867 aa3.12□□□□□ -1.91
KNL1-211ENST00000533001 RGPD2P0DJD1 1756 aa3.12□□□□□ -1.91
KNL1-211ENST00000533001 NCAPD2Q15021 1401 aa3.12□□□□□ -1.91
KNL1-211ENST00000533001 ABCC11Q96J66 1382 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms