RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
PTP4A2-213ENST00000532001 TTLL13PA6NNM8 815 aa13.24□□□□□ -0.29
PTP4A2-213ENST00000532001 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
PTP4A2-213ENST00000532001 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
PTP4A2-213ENST00000532001 HSPA1LP34931 641 aa13.22□□□□□ -0.29
PTP4A2-213ENST00000532001 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
PTP4A2-213ENST00000532001 MED1Q15648 1581 aaPredicted RBP13.22□□□□□ -0.29
PTP4A2-213ENST00000532001 PIP4K2BP78356 416 aa13.21□□□□□ -0.29
PTP4A2-213ENST00000532001 C7P10643 843 aa13.2□□□□□ -0.3
PTP4A2-213ENST00000532001 ILDR2Q71H61 639 aa13.2□□□□□ -0.3
PTP4A2-213ENST00000532001 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
PTP4A2-213ENST00000532001 RRBP1Q9P2E9 1410 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-213ENST00000532001 CHD2O14647 1828 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-213ENST00000532001 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
PTP4A2-213ENST00000532001 RIMS2Q9UQ26 1411 aa13.19□□□□□ -0.3
PTP4A2-213ENST00000532001 DIP2AQ14689 1571 aa13.19□□□□□ -0.3
PTP4A2-213ENST00000532001 KCNA6P17658 529 aa13.18□□□□□ -0.3
PTP4A2-213ENST00000532001 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
PTP4A2-213ENST00000532001 SPHKAPQ2M3C7 1700 aa13.18□□□□□ -0.3
PTP4A2-213ENST00000532001 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
PTP4A2-213ENST00000532001 NUP155O75694 1391 aa13.17□□□□□ -0.3
PTP4A2-213ENST00000532001 SOCS7O14512 581 aa13.16□□□□□ -0.3
PTP4A2-213ENST00000532001 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
PTP4A2-213ENST00000532001 TMEM94Q12767 1356 aa13.16□□□□□ -0.3
PTP4A2-213ENST00000532001 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
PTP4A2-213ENST00000532001 FAM135BQ49AJ0 1406 aa13.14□□□□□ -0.31
PTP4A2-213ENST00000532001 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
PTP4A2-213ENST00000532001 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
PTP4A2-213ENST00000532001 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTP4A2-213ENST00000532001 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
PTP4A2-213ENST00000532001 ROBO1Q9Y6N7 1651 aa13.12□□□□□ -0.31
PTP4A2-213ENST00000532001 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
PTP4A2-213ENST00000532001 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
PTP4A2-213ENST00000532001 TRPM2O94759 1503 aa13.12□□□□□ -0.31
PTP4A2-213ENST00000532001 NCOA3Q9Y6Q9 1424 aa13.12□□□□□ -0.31
PTP4A2-213ENST00000532001 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
PTP4A2-213ENST00000532001 TBX22Q9Y458 520 aa13.11□□□□□ -0.31
PTP4A2-213ENST00000532001 NAIPQ13075 1403 aa13.11□□□□□ -0.31
PTP4A2-213ENST00000532001 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
PTP4A2-213ENST00000532001 NRXN3Q9Y4C0 1643 aa13.1□□□□□ -0.31
PTP4A2-213ENST00000532001 ITGAEP38570 1179 aa13.1□□□□□ -0.31
PTP4A2-213ENST00000532001 IER5LQ5T953 404 aa13.1□□□□□ -0.31
PTP4A2-213ENST00000532001 PROSER2Q86WR7 435 aaPredicted RBP13.1□□□□□ -0.31
PTP4A2-213ENST00000532001 MSH6P52701 1360 aa13.09□□□□□ -0.31
PTP4A2-213ENST00000532001 CLTCL1P53675 1640 aa13.09□□□□□ -0.31
PTP4A2-213ENST00000532001 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
PTP4A2-213ENST00000532001 HFM1A2PYH4 1435 aa13.08□□□□□ -0.32
PTP4A2-213ENST00000532001 PPARGC1BQ86YN6 1023 aaKnown RBP13.08□□□□□ -0.32
PTP4A2-213ENST00000532001 KIF1BO60333 1816 aa13.08□□□□□ -0.32
PTP4A2-213ENST00000532001 POTEFA5A3E0 1075 aa13.07□□□□□ -0.32
PTP4A2-213ENST00000532001 BCANQ96GW7 911 aa13.07□□□□□ -0.32
PTP4A2-213ENST00000532001 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
PTP4A2-213ENST00000532001 NEXMIFQ5QGS0 1516 aa13.06□□□□□ -0.32
PTP4A2-213ENST00000532001 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
PTP4A2-213ENST00000532001 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
PTP4A2-213ENST00000532001 DCCP43146 1447 aa13.03□□□□□ -0.32
PTP4A2-213ENST00000532001 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
PTP4A2-213ENST00000532001 COL16A1Q07092 1604 aaPredicted RBP13.02□□□□□ -0.32
PTP4A2-213ENST00000532001 PSEN1P49768 467 aa13.02□□□□□ -0.33
PTP4A2-213ENST00000532001 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
PTP4A2-213ENST00000532001 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
PTP4A2-213ENST00000532001 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
PTP4A2-213ENST00000532001 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.33
PTP4A2-213ENST00000532001 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
PTP4A2-213ENST00000532001 NUTM2DQ5VT03 806 aaPredicted RBP13.01□□□□□ -0.33
PTP4A2-213ENST00000532001 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
PTP4A2-213ENST00000532001 SEC24BO95487 1268 aa13□□□□□ -0.33
PTP4A2-213ENST00000532001 POTEJP0CG39 1038 aa13□□□□□ -0.33
PTP4A2-213ENST00000532001 OTUD5Q96G74 571 aa13□□□□□ -0.33
PTP4A2-213ENST00000532001 PPLO60437 1756 aa12.99□□□□□ -0.33
PTP4A2-213ENST00000532001 PRAG1Q86YV5 1406 aa12.99□□□□□ -0.33
PTP4A2-213ENST00000532001 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
PTP4A2-213ENST00000532001 C19orf44Q9H6X5 657 aa12.99□□□□□ -0.33
PTP4A2-213ENST00000532001 AMOTL2Q9Y2J4 779 aa12.98□□□□□ -0.33
PTP4A2-213ENST00000532001 SHPRHQ149N8 1683 aa12.98□□□□□ -0.33
PTP4A2-213ENST00000532001 JCADQ9P266 1359 aa12.97□□□□□ -0.33
PTP4A2-213ENST00000532001 IRX5P78411 483 aaPredicted RBP12.97□□□□□ -0.33
PTP4A2-213ENST00000532001 NALCNQ8IZF0 1738 aa12.96□□□□□ -0.33
PTP4A2-213ENST00000532001 METP08581 1390 aa12.96□□□□□ -0.33
PTP4A2-213ENST00000532001 NHSL1Q5SYE7 1610 aa12.96□□□□□ -0.33
PTP4A2-213ENST00000532001 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.33
PTP4A2-213ENST00000532001 PTCH1Q13635 1447 aa12.96□□□□□ -0.34
PTP4A2-213ENST00000532001 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.34
PTP4A2-213ENST00000532001 RPGRIP1LQ68CZ1 1315 aa12.95□□□□□ -0.34
PTP4A2-213ENST00000532001 ATF3P18847 181 aa12.95□□□□□ -0.34
PTP4A2-213ENST00000532001 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
PTP4A2-213ENST00000532001 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
PTP4A2-213ENST00000532001 RGS17Q9UGC6 210 aaPredicted RBP12.95□□□□□ -0.34
PTP4A2-213ENST00000532001 ASXL1Q8IXJ9 1541 aa12.94□□□□□ -0.34
PTP4A2-213ENST00000532001 IFT172Q9UG01 1749 aa12.94□□□□□ -0.34
PTP4A2-213ENST00000532001 MAMSTRQ6ZN01 415 aa12.94□□□□□ -0.34
PTP4A2-213ENST00000532001 MST1RQ04912 1400 aa12.94□□□□□ -0.34
PTP4A2-213ENST00000532001 PLCG2P16885 1265 aa12.93□□□□□ -0.34
PTP4A2-213ENST00000532001 TRIM52Q96A61 297 aa12.93□□□□□ -0.34
PTP4A2-213ENST00000532001 LAMC1P11047 1609 aa12.92□□□□□ -0.34
PTP4A2-213ENST00000532001 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
PTP4A2-213ENST00000532001 VGFO15240 615 aaPredicted RBP12.92□□□□□ -0.34
PTP4A2-213ENST00000532001 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
PTP4A2-213ENST00000532001 SPATA31A6Q5VVP1 1343 aa12.91□□□□□ -0.34
PTP4A2-213ENST00000532001 ACIN1Q9UKV3 1341 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms