RNA–Protein interactions for RNA: ENST00000531660.5

NR1H3-233, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-233ENST00000531660 COL16A1Q07092 1604 aaPredicted RBP24.4■■□□□ 1.5
NR1H3-233ENST00000531660 KIAA1210Q9ULL0 1709 aa24.39■■□□□ 1.5
NR1H3-233ENST00000531660 JCADQ9P266 1359 aa24.39■■□□□ 1.49
NR1H3-233ENST00000531660 SIN3AQ96ST3 1273 aa24.38■■□□□ 1.49
NR1H3-233ENST00000531660 NHSL1Q5SYE7 1610 aa24.37■■□□□ 1.49
NR1H3-233ENST00000531660 PRAM1Q96QH2 718 aa24.37■■□□□ 1.49
NR1H3-233ENST00000531660 POGKQ9P215 609 aa24.36■■□□□ 1.49
NR1H3-233ENST00000531660 L3MBTL2Q969R5 705 aa24.35■■□□□ 1.49
NR1H3-233ENST00000531660 NEUROD1Q13562 356 aa24.34■■□□□ 1.49
NR1H3-233ENST00000531660 TRAK1Q9UPV9 953 aa24.34■■□□□ 1.49
NR1H3-233ENST00000531660 ORAI2Q96SN7 254 aa24.32■■□□□ 1.48
NR1H3-233ENST00000531660 FMN2Q9NZ56 1722 aa24.32■■□□□ 1.48
NR1H3-233ENST00000531660 LRRC59Q96AG4 307 aaKnown RBP24.3■■□□□ 1.48
NR1H3-233ENST00000531660 SPATA31A6Q5VVP1 1343 aa24.3■■□□□ 1.48
NR1H3-233ENST00000531660 ESCO1Q5FWF5 840 aa24.29■■□□□ 1.48
NR1H3-233ENST00000531660 SHPRHQ149N8 1683 aa24.29■■□□□ 1.48
NR1H3-233ENST00000531660 ADGRB2O60241 1585 aa24.29■■□□□ 1.48
NR1H3-233ENST00000531660 SAFB2Q14151 953 aaKnown RBP eCLIP24.28■■□□□ 1.48
NR1H3-233ENST00000531660 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
NR1H3-233ENST00000531660 ARHGEF28Q8N1W1 1705 aaKnown RBP24.27■■□□□ 1.48
NR1H3-233ENST00000531660 SOS2Q07890 1332 aaPredicted RBP24.26■■□□□ 1.47
NR1H3-233ENST00000531660 NPHP3Q7Z494 1330 aa24.26■■□□□ 1.47
NR1H3-233ENST00000531660 NBPF1Q3BBV0 1214 aa24.25■■□□□ 1.47
NR1H3-233ENST00000531660 DDX17Q92841 729 aaKnown RBP24.25■■□□□ 1.47
NR1H3-233ENST00000531660 EIF3AQ14152 1382 aaKnown RBP24.24■■□□□ 1.47
NR1H3-233ENST00000531660 NUTM2FA1L443 756 aa24.23■■□□□ 1.47
NR1H3-233ENST00000531660 ANKARQ7Z5J8 1434 aa24.23■■□□□ 1.47
NR1H3-233ENST00000531660 KIF1AQ12756 1690 aa24.22■■□□□ 1.47
NR1H3-233ENST00000531660 MINK1Q8N4C8 1332 aaPredicted RBP24.21■■□□□ 1.47
NR1H3-233ENST00000531660 TONSLQ96HA7 1378 aa24.2■■□□□ 1.46
NR1H3-233ENST00000531660 WASLO00401 505 aaPredicted RBP24.19■■□□□ 1.46
NR1H3-233ENST00000531660 FOXO3O43524 673 aa24.19■■□□□ 1.46
NR1H3-233ENST00000531660 TRPM1Q7Z4N2 1603 aa24.19■■□□□ 1.46
NR1H3-233ENST00000531660 RGPD8O14715 1765 aaPredicted RBP24.19■■□□□ 1.46
NR1H3-233ENST00000531660 PNPLA6Q8IY17 1366 aa24.18■■□□□ 1.46
NR1H3-233ENST00000531660 ILDR2Q71H61 639 aa24.18■■□□□ 1.46
NR1H3-233ENST00000531660 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
NR1H3-233ENST00000531660 PHF8Q9UPP1 1060 aa24.18■■□□□ 1.46
NR1H3-233ENST00000531660 PXDNQ92626 1479 aa24.17■■□□□ 1.46
NR1H3-233ENST00000531660 PCGF6Q9BYE7 350 aa24.16■■□□□ 1.46
NR1H3-233ENST00000531660 TULP4Q9NRJ4 1543 aa24.15■■□□□ 1.46
NR1H3-233ENST00000531660 LRP6O75581 1613 aa24.15■■□□□ 1.46
NR1H3-233ENST00000531660 USP32Q8NFA0 1604 aa24.14■■□□□ 1.46
NR1H3-233ENST00000531660 ROCK2O75116 1388 aaKnown RBP24.14■■□□□ 1.45
NR1H3-233ENST00000531660 RGS17Q9UGC6 210 aaPredicted RBP24.13■■□□□ 1.45
NR1H3-233ENST00000531660 CENPJQ9HC77 1338 aaPredicted RBP24.12■■□□□ 1.45
NR1H3-233ENST00000531660 NBPF8Q3BBV2 869 aa24.12■■□□□ 1.45
NR1H3-233ENST00000531660 MEX3CQ5U5Q3 659 aaKnown RBP24.12■■□□□ 1.45
NR1H3-233ENST00000531660 CLSPNQ9HAW4 1339 aa24.11■■□□□ 1.45
NR1H3-233ENST00000531660 PSME1Q06323 249 aa24.11■■□□□ 1.45
NR1H3-233ENST00000531660 GPRASP1Q5JY77 1395 aa24.11■■□□□ 1.45
NR1H3-233ENST00000531660 NUTM2BA6NNL0 878 aaPredicted RBP24.1■■□□□ 1.45
NR1H3-233ENST00000531660 NUTM2EB1AL46 878 aaPredicted RBP24.1■■□□□ 1.45
NR1H3-233ENST00000531660 KRT28Q7Z3Y7 464 aa24.1■■□□□ 1.45
NR1H3-233ENST00000531660 NUTM2AQ8IVF1 878 aaPredicted RBP24.1■■□□□ 1.45
NR1H3-233ENST00000531660 COL22A1Q8NFW1 1626 aaPredicted RBP24.1■■□□□ 1.45
NR1H3-233ENST00000531660 PRR36Q9H6K5 1346 aa24.1■■□□□ 1.45
NR1H3-233ENST00000531660 XPCQ01831 940 aaPredicted RBP24.09■■□□□ 1.45
NR1H3-233ENST00000531660 CDK19Q9BWU1 502 aa24.09■■□□□ 1.45
NR1H3-233ENST00000531660 SPATA31A3Q5VYP0 1347 aa24.07■■□□□ 1.44
NR1H3-233ENST00000531660 ITSN1Q15811 1721 aa24.07■■□□□ 1.44
NR1H3-233ENST00000531660 SBNO1A3KN83 1393 aa24.06■■□□□ 1.44
NR1H3-233ENST00000531660 PMFBP1Q8TBY8 1022 aa24.06■■□□□ 1.44
NR1H3-233ENST00000531660 NUDT16Q96DE0 195 aaKnown RBP24.06■■□□□ 1.44
NR1H3-233ENST00000531660 ATP7BP35670 1465 aa24.06■■□□□ 1.44
NR1H3-233ENST00000531660 QRICH2Q9H0J4 1663 aa24.05■■□□□ 1.44
NR1H3-233ENST00000531660 RALGAPBQ86X10 1494 aa24.05■■□□□ 1.44
NR1H3-233ENST00000531660 ZNF772Q68DY9 489 aaPredicted RBP24.04■■□□□ 1.44
NR1H3-233ENST00000531660 TIMELESSQ9UNS1 1208 aa24.03■■□□□ 1.44
NR1H3-233ENST00000531660 CCDC61Q9Y6R9 512 aa24.03■■□□□ 1.44
NR1H3-233ENST00000531660 TNS3Q68CZ2 1445 aa24.02■■□□□ 1.44
NR1H3-233ENST00000531660 CARD11Q9BXL7 1154 aa24.02■■□□□ 1.44
NR1H3-233ENST00000531660 POTEAQ6S8J7 498 aa24.01■■□□□ 1.43
NR1H3-233ENST00000531660 NGDNQ8NEJ9 315 aaKnown RBP24.01■■□□□ 1.43
NR1H3-233ENST00000531660 SOCS7O14512 581 aa24■■□□□ 1.43
NR1H3-233ENST00000531660 ARHGEF10O15013 1369 aa24■■□□□ 1.43
NR1H3-233ENST00000531660 SRPK2P78362 688 aaKnown RBP23.99■■□□□ 1.43
NR1H3-233ENST00000531660 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
NR1H3-233ENST00000531660 PLEKHG3A1L390 1219 aa23.98■■□□□ 1.43
NR1H3-233ENST00000531660 EVC2Q86UK5 1308 aa23.98■■□□□ 1.43
NR1H3-233ENST00000531660 ADAMTS2O95450 1211 aa23.97■■□□□ 1.43
NR1H3-233ENST00000531660 AFF2P51816 1311 aa23.97■■□□□ 1.43
NR1H3-233ENST00000531660 C8orf37Q96NL8 207 aa23.97■■□□□ 1.43
NR1H3-233ENST00000531660 TRPM3Q9HCF6 1732 aaPredicted RBP23.96■■□□□ 1.43
NR1H3-233ENST00000531660 POLR3AO14802 1390 aaPredicted RBP23.96■■□□□ 1.43
NR1H3-233ENST00000531660 SBNO2Q9Y2G9 1366 aa23.96■■□□□ 1.43
NR1H3-233ENST00000531660 NGLY1Q96IV0 654 aa23.95■■□□□ 1.42
NR1H3-233ENST00000531660 CABP2Q9NPB3 220 aa23.94■■□□□ 1.42
NR1H3-233ENST00000531660 MARF1Q9Y4F3 1742 aaKnown RBP23.93■■□□□ 1.42
NR1H3-233ENST00000531660 ACEP12821 1306 aa23.92■■□□□ 1.42
NR1H3-233ENST00000531660 LMOD2Q6P5Q4 547 aa23.92■■□□□ 1.42
NR1H3-233ENST00000531660 ALS2Q96Q42 1657 aa23.92■■□□□ 1.42
NR1H3-233ENST00000531660 FNBP4Q8N3X1 1017 aaPredicted RBP23.91■■□□□ 1.42
NR1H3-233ENST00000531660 PPIP5K1Q6PFW1 1433 aa23.91■■□□□ 1.42
NR1H3-233ENST00000531660 CCER1Q8TC90 406 aaPredicted RBP23.9■■□□□ 1.42
NR1H3-233ENST00000531660 HAP1P54257 671 aaPredicted RBP23.88■■□□□ 1.41
NR1H3-233ENST00000531660 BRD4O60885 1362 aaPredicted RBP23.88■■□□□ 1.41
NR1H3-233ENST00000531660 SLC24A1O60721 1099 aa23.87■■□□□ 1.41
NR1H3-233ENST00000531660 PAK3O75914 559 aaPredicted RBP23.87■■□□□ 1.41
NR1H3-233ENST00000531660 RXRBP28702 533 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms