RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ADGRL3Q9HAR2 1447 aa23.92■■□□□ 1.42
SF3B2-211ENST00000531041 ADGRB2O60241 1585 aa23.91■■□□□ 1.42
SF3B2-211ENST00000531041 SAFB2Q14151 953 aaKnown RBP eCLIP23.9■■□□□ 1.42
SF3B2-211ENST00000531041 C14orf37Q86TY3 774 aa23.88■■□□□ 1.41
SF3B2-211ENST00000531041 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
SF3B2-211ENST00000531041 CDC42BPGQ6DT37 1551 aa23.87■■□□□ 1.41
SF3B2-211ENST00000531041 EIF4G2P78344 907 aaKnown RBP eCLIP23.87■■□□□ 1.41
SF3B2-211ENST00000531041 CERKQ8TCT0 537 aa23.87■■□□□ 1.41
SF3B2-211ENST00000531041 MSH6P52701 1360 aa23.87■■□□□ 1.41
SF3B2-211ENST00000531041 SBNO2Q9Y2G9 1366 aa23.87■■□□□ 1.41
SF3B2-211ENST00000531041 DCCP43146 1447 aa23.86■■□□□ 1.41
SF3B2-211ENST00000531041 ST20-MTHFSA0A0A6YYL1 179 aa23.86■■□□□ 1.41
SF3B2-211ENST00000531041 FMN2Q9NZ56 1722 aa23.85■■□□□ 1.41
SF3B2-211ENST00000531041 MINK1Q8N4C8 1332 aaPredicted RBP23.84■■□□□ 1.41
SF3B2-211ENST00000531041 RGPD8O14715 1765 aaPredicted RBP23.82■■□□□ 1.4
SF3B2-211ENST00000531041 HSPA5P11021 654 aaKnown RBP23.81■■□□□ 1.4
SF3B2-211ENST00000531041 TESK2Q96S53 571 aa23.81■■□□□ 1.4
SF3B2-211ENST00000531041 HIRIP3Q9BW71 556 aaPredicted RBP23.81■■□□□ 1.4
SF3B2-211ENST00000531041 SLC24A1O60721 1099 aa23.8■■□□□ 1.4
SF3B2-211ENST00000531041 TULP4Q9NRJ4 1543 aa23.8■■□□□ 1.4
SF3B2-211ENST00000531041 ATF3P18847 181 aa23.79■■□□□ 1.4
SF3B2-211ENST00000531041 CADPS2Q86UW7 1296 aa23.79■■□□□ 1.4
SF3B2-211ENST00000531041 WASLO00401 505 aaPredicted RBP23.78■■□□□ 1.4
SF3B2-211ENST00000531041 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
SF3B2-211ENST00000531041 ITSN1Q15811 1721 aa23.75■■□□□ 1.39
SF3B2-211ENST00000531041 EVC2Q86UK5 1308 aa23.75■■□□□ 1.39
SF3B2-211ENST00000531041 MST1RQ04912 1400 aa23.74■■□□□ 1.39
SF3B2-211ENST00000531041 CDK19Q9BWU1 502 aa23.74■■□□□ 1.39
SF3B2-211ENST00000531041 ANKARQ7Z5J8 1434 aa23.72■■□□□ 1.39
SF3B2-211ENST00000531041 TOM1O60784 492 aa23.71■■□□□ 1.39
SF3B2-211ENST00000531041 TMF1P82094 1093 aa23.71■■□□□ 1.39
SF3B2-211ENST00000531041 TOPAZ1Q8N9V7 1692 aa23.71■■□□□ 1.39
SF3B2-211ENST00000531041 SLAIN2Q9P270 581 aa23.7■■□□□ 1.38
SF3B2-211ENST00000531041 C1orf167Q5SNV9 1468 aa23.7■■□□□ 1.38
SF3B2-211ENST00000531041 ATP7BP35670 1465 aa23.69■■□□□ 1.38
SF3B2-211ENST00000531041 DISP3Q9P2K9 1392 aa23.69■■□□□ 1.38
SF3B2-211ENST00000531041 UBAP1LF5GYI3 381 aa23.68■■□□□ 1.38
SF3B2-211ENST00000531041 SRPK2P78362 688 aaKnown RBP23.68■■□□□ 1.38
SF3B2-211ENST00000531041 PUS7Q96PZ0 661 aaKnown RBP23.68■■□□□ 1.38
SF3B2-211ENST00000531041 NUTM2FA1L443 756 aa23.67■■□□□ 1.38
SF3B2-211ENST00000531041 PRR36Q9H6K5 1346 aa23.67■■□□□ 1.38
SF3B2-211ENST00000531041 ROBO1Q9Y6N7 1651 aa23.67■■□□□ 1.38
SF3B2-211ENST00000531041 CABP2Q9NPB3 220 aa23.67■■□□□ 1.38
SF3B2-211ENST00000531041 KIF1AQ12756 1690 aa23.66■■□□□ 1.38
SF3B2-211ENST00000531041 NUDT16Q96DE0 195 aaKnown RBP23.66■■□□□ 1.38
SF3B2-211ENST00000531041 CDCA8Q53HL2 280 aa23.65■■□□□ 1.38
SF3B2-211ENST00000531041 ATAD2Q6PL18 1390 aa23.64■■□□□ 1.37
SF3B2-211ENST00000531041 CCDC61Q9Y6R9 512 aa23.63■■□□□ 1.37
SF3B2-211ENST00000531041 MYOM1P52179 1685 aa23.61■■□□□ 1.37
SF3B2-211ENST00000531041 C11orf95C9JLR9 678 aaPredicted RBP23.6■■□□□ 1.37
SF3B2-211ENST00000531041 ESCO1Q5FWF5 840 aa23.6■■□□□ 1.37
SF3B2-211ENST00000531041 ORAI2Q96SN7 254 aa23.6■■□□□ 1.37
SF3B2-211ENST00000531041 NHSL1Q5SYE7 1610 aa23.6■■□□□ 1.37
SF3B2-211ENST00000531041 BRINP3Q76B58 766 aa23.59■■□□□ 1.37
SF3B2-211ENST00000531041 PPIP5K1Q6PFW1 1433 aa23.59■■□□□ 1.37
SF3B2-211ENST00000531041 AKAP12Q02952 1782 aa23.59■■□□□ 1.37
SF3B2-211ENST00000531041 PHF8Q9UPP1 1060 aa23.58■■□□□ 1.36
SF3B2-211ENST00000531041 PIP4K2BP78356 416 aa23.57■■□□□ 1.36
SF3B2-211ENST00000531041 PLEKHG3A1L390 1219 aa23.56■■□□□ 1.36
SF3B2-211ENST00000531041 NINLQ9Y2I6 1382 aa23.55■■□□□ 1.36
SF3B2-211ENST00000531041 CABP1Q9NZU7 370 aa23.55■■□□□ 1.36
SF3B2-211ENST00000531041 KIF7Q2M1P5 1343 aa23.55■■□□□ 1.36
SF3B2-211ENST00000531041 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
SF3B2-211ENST00000531041 AHDC1Q5TGY3 1603 aaPredicted RBP23.54■■□□□ 1.36
SF3B2-211ENST00000531041 PMFBP1Q8TBY8 1022 aa23.53■■□□□ 1.36
SF3B2-211ENST00000531041 POLR3AO14802 1390 aaPredicted RBP23.53■■□□□ 1.36
SF3B2-211ENST00000531041 PHLPP1O60346 1717 aa23.52■■□□□ 1.36
SF3B2-211ENST00000531041 MON2Q7Z3U7 1717 aa23.52■■□□□ 1.36
SF3B2-211ENST00000531041 CCDC7Q96M83 1385 aa23.52■■□□□ 1.36
SF3B2-211ENST00000531041 WASHC2AQ641Q2 1341 aa23.51■■□□□ 1.35
SF3B2-211ENST00000531041 TMC1Q8TDI8 760 aa23.5■■□□□ 1.35
SF3B2-211ENST00000531041 FBXO41Q8TF61 875 aa23.5■■□□□ 1.35
SF3B2-211ENST00000531041 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
SF3B2-211ENST00000531041 ACEP12821 1306 aa23.5■■□□□ 1.35
SF3B2-211ENST00000531041 CD163L1Q9NR16 1453 aa23.5■■□□□ 1.35
SF3B2-211ENST00000531041 NPHP3Q7Z494 1330 aa23.5■■□□□ 1.35
SF3B2-211ENST00000531041 FOXO3O43524 673 aa23.5■■□□□ 1.35
SF3B2-211ENST00000531041 NGDNQ8NEJ9 315 aaKnown RBP23.5■■□□□ 1.35
SF3B2-211ENST00000531041 POLR3GLQ9BT43 218 aa23.5■■□□□ 1.35
SF3B2-211ENST00000531041 CPSF1Q10570 1443 aaKnown RBP23.49■■□□□ 1.35
SF3B2-211ENST00000531041 TRPM3Q9HCF6 1732 aaPredicted RBP23.48■■□□□ 1.35
SF3B2-211ENST00000531041 PXDNQ92626 1479 aa23.47■■□□□ 1.35
SF3B2-211ENST00000531041 DDX17Q92841 729 aaKnown RBP23.46■■□□□ 1.35
SF3B2-211ENST00000531041 ZNF692Q9BU19 519 aaPredicted RBP23.46■■□□□ 1.35
SF3B2-211ENST00000531041 TERF2IPQ9NYB0 399 aa23.46■■□□□ 1.35
SF3B2-211ENST00000531041 COL16A1Q07092 1604 aaPredicted RBP23.45■■□□□ 1.35
SF3B2-211ENST00000531041 NRKQ7Z2Y5 1582 aa23.45■■□□□ 1.35
SF3B2-211ENST00000531041 PSME1Q06323 249 aa23.45■■□□□ 1.34
SF3B2-211ENST00000531041 ANKRD36BQ8N2N9 1353 aa23.45■■□□□ 1.34
SF3B2-211ENST00000531041 SOS2Q07890 1332 aaPredicted RBP23.44■■□□□ 1.34
SF3B2-211ENST00000531041 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
SF3B2-211ENST00000531041 KRT28Q7Z3Y7 464 aa23.43■■□□□ 1.34
SF3B2-211ENST00000531041 HDGFL2Q7Z4V5 671 aaPredicted RBP23.43■■□□□ 1.34
SF3B2-211ENST00000531041 USP6P35125 1406 aa23.43■■□□□ 1.34
SF3B2-211ENST00000531041 A0A1W2PP64 1363 aa23.43■■□□□ 1.34
SF3B2-211ENST00000531041 BRD4O60885 1362 aaPredicted RBP23.42■■□□□ 1.34
SF3B2-211ENST00000531041 KTN1Q86UP2 1357 aaKnown RBP23.42■■□□□ 1.34
SF3B2-211ENST00000531041 ALS2Q96Q42 1657 aa23.42■■□□□ 1.34
SF3B2-211ENST00000531041 SSH2Q76I76 1423 aa23.4■■□□□ 1.34
SF3B2-211ENST00000531041 XPCQ01831 940 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms