RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 TIMELESSQ9UNS1 1208 aa8.15□□□□□ -1.1
RPUSD4-204ENST00000530036 ROBO1Q9Y6N7 1651 aa8.14□□□□□ -1.11
RPUSD4-204ENST00000530036 PLEKHH1Q9ULM0 1364 aa8.14□□□□□ -1.11
RPUSD4-204ENST00000530036 NBPF1Q3BBV0 1214 aa8.14□□□□□ -1.11
RPUSD4-204ENST00000530036 NBPF8Q3BBV2 869 aa8.14□□□□□ -1.11
RPUSD4-204ENST00000530036 RBM33Q96EV2 1170 aaKnown RBP8.14□□□□□ -1.11
RPUSD4-204ENST00000530036 HSPA1LP34931 641 aa8.13□□□□□ -1.11
RPUSD4-204ENST00000530036 STK26Q9P289 416 aa8.13□□□□□ -1.11
RPUSD4-204ENST00000530036 MST1RQ04912 1400 aa8.12□□□□□ -1.11
RPUSD4-204ENST00000530036 RGPD8O14715 1765 aaPredicted RBP8.12□□□□□ -1.11
RPUSD4-204ENST00000530036 ROCK2O75116 1388 aaKnown RBP8.12□□□□□ -1.11
RPUSD4-204ENST00000530036 NHSL1Q5SYE7 1610 aa8.12□□□□□ -1.11
RPUSD4-204ENST00000530036 USP32Q8NFA0 1604 aa8.12□□□□□ -1.11
RPUSD4-204ENST00000530036 C19orf44Q9H6X5 657 aa8.12□□□□□ -1.11
RPUSD4-204ENST00000530036 PIP4K2BP78356 416 aa8.11□□□□□ -1.11
RPUSD4-204ENST00000530036 WAPLQ7Z5K2 1190 aa8.11□□□□□ -1.11
RPUSD4-204ENST00000530036 PRAM1Q96QH2 718 aa8.11□□□□□ -1.11
RPUSD4-204ENST00000530036 ITSN1Q15811 1721 aa8.11□□□□□ -1.11
RPUSD4-204ENST00000530036 TOPAZ1Q8N9V7 1692 aa8.11□□□□□ -1.11
RPUSD4-204ENST00000530036 AHDC1Q5TGY3 1603 aaPredicted RBP8.11□□□□□ -1.11
RPUSD4-204ENST00000530036 TOM1O60784 492 aa8.1□□□□□ -1.11
RPUSD4-204ENST00000530036 C14orf37Q86TY3 774 aa8.1□□□□□ -1.11
RPUSD4-204ENST00000530036 CADPS2Q86UW7 1296 aa8.1□□□□□ -1.11
RPUSD4-204ENST00000530036 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
RPUSD4-204ENST00000530036 KIF1AQ12756 1690 aa8.1□□□□□ -1.11
RPUSD4-204ENST00000530036 TULP4Q9NRJ4 1543 aa8.09□□□□□ -1.11
RPUSD4-204ENST00000530036 C1orf167Q5SNV9 1468 aa8.09□□□□□ -1.11
RPUSD4-204ENST00000530036 COL16A1Q07092 1604 aaPredicted RBP8.09□□□□□ -1.11
RPUSD4-204ENST00000530036 PHLPP1O60346 1717 aa8.09□□□□□ -1.11
RPUSD4-204ENST00000530036 EIF3AQ14152 1382 aaKnown RBP8.09□□□□□ -1.12
RPUSD4-204ENST00000530036 SBNO2Q9Y2G9 1366 aa8.09□□□□□ -1.12
RPUSD4-204ENST00000530036 ATP7BP35670 1465 aa8.08□□□□□ -1.12
RPUSD4-204ENST00000530036 ATF3P18847 181 aa8.08□□□□□ -1.12
RPUSD4-204ENST00000530036 ANKARQ7Z5J8 1434 aa8.08□□□□□ -1.12
RPUSD4-204ENST00000530036 CENPJQ9HC77 1338 aaPredicted RBP8.07□□□□□ -1.12
RPUSD4-204ENST00000530036 SAFB2Q14151 953 aaKnown RBP eCLIP8.07□□□□□ -1.12
RPUSD4-204ENST00000530036 CARD11Q9BXL7 1154 aa8.07□□□□□ -1.12
RPUSD4-204ENST00000530036 POGKQ9P215 609 aa8.07□□□□□ -1.12
RPUSD4-204ENST00000530036 SLAIN2Q9P270 581 aa8.07□□□□□ -1.12
RPUSD4-204ENST00000530036 MINK1Q8N4C8 1332 aaPredicted RBP8.05□□□□□ -1.12
RPUSD4-204ENST00000530036 SHPRHQ149N8 1683 aa8.05□□□□□ -1.12
RPUSD4-204ENST00000530036 BRINP3Q76B58 766 aa8.05□□□□□ -1.12
RPUSD4-204ENST00000530036 USP47Q96K76 1375 aa8.05□□□□□ -1.12
RPUSD4-204ENST00000530036 TRPM3Q9HCF6 1732 aaPredicted RBP8.04□□□□□ -1.12
RPUSD4-204ENST00000530036 WASLO00401 505 aaPredicted RBP8.04□□□□□ -1.12
RPUSD4-204ENST00000530036 HIRIP3Q9BW71 556 aaPredicted RBP8.04□□□□□ -1.12
RPUSD4-204ENST00000530036 PXDNQ92626 1479 aa8.04□□□□□ -1.12
RPUSD4-204ENST00000530036 AKAP12Q02952 1782 aa8.04□□□□□ -1.12
RPUSD4-204ENST00000530036 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
RPUSD4-204ENST00000530036 MYOM1P52179 1685 aa8.02□□□□□ -1.13
RPUSD4-204ENST00000530036 ALS2Q96Q42 1657 aa8.02□□□□□ -1.13
RPUSD4-204ENST00000530036 TESK2Q96S53 571 aa8.02□□□□□ -1.13
RPUSD4-204ENST00000530036 ORAI2Q96SN7 254 aa8.02□□□□□ -1.13
RPUSD4-204ENST00000530036 RGS17Q9UGC6 210 aaPredicted RBP8.02□□□□□ -1.13
RPUSD4-204ENST00000530036 MON2Q7Z3U7 1717 aa8.02□□□□□ -1.13
RPUSD4-204ENST00000530036 COL22A1Q8NFW1 1626 aaPredicted RBP8.02□□□□□ -1.13
RPUSD4-204ENST00000530036 NRKQ7Z2Y5 1582 aa8.01□□□□□ -1.13
RPUSD4-204ENST00000530036 ABCA3Q99758 1704 aa8.01□□□□□ -1.13
RPUSD4-204ENST00000530036 NUTM2FA1L443 756 aa8.01□□□□□ -1.13
RPUSD4-204ENST00000530036 CDK19Q9BWU1 502 aa8.01□□□□□ -1.13
RPUSD4-204ENST00000530036 SOS2Q07890 1332 aaPredicted RBP8.01□□□□□ -1.13
RPUSD4-204ENST00000530036 EVC2Q86UK5 1308 aa8.01□□□□□ -1.13
RPUSD4-204ENST00000530036 CRYBG1Q9Y4K1 1723 aa8□□□□□ -1.13
RPUSD4-204ENST00000530036 POLR3AO14802 1390 aaPredicted RBP8□□□□□ -1.13
RPUSD4-204ENST00000530036 ST20-MTHFSA0A0A6YYL1 179 aa8□□□□□ -1.13
RPUSD4-204ENST00000530036 ESCO1Q5FWF5 840 aa8□□□□□ -1.13
RPUSD4-204ENST00000530036 NUDT16Q96DE0 195 aaKnown RBP8□□□□□ -1.13
RPUSD4-204ENST00000530036 PHF8Q9UPP1 1060 aa8□□□□□ -1.13
RPUSD4-204ENST00000530036 PPIP5K1Q6PFW1 1433 aa8□□□□□ -1.13
RPUSD4-204ENST00000530036 NPHP3Q7Z494 1330 aa8□□□□□ -1.13
RPUSD4-204ENST00000530036 ATAD2Q6PL18 1390 aa7.99□□□□□ -1.13
RPUSD4-204ENST00000530036 MARF1Q9Y4F3 1742 aaKnown RBP7.98□□□□□ -1.13
RPUSD4-204ENST00000530036 TNS3Q68CZ2 1445 aa7.98□□□□□ -1.13
RPUSD4-204ENST00000530036 SRPK2P78362 688 aaKnown RBP7.98□□□□□ -1.13
RPUSD4-204ENST00000530036 DDX17Q92841 729 aaKnown RBP7.98□□□□□ -1.13
RPUSD4-204ENST00000530036 PUS7Q96PZ0 661 aaKnown RBP7.98□□□□□ -1.13
RPUSD4-204ENST00000530036 CABP2Q9NPB3 220 aa7.98□□□□□ -1.13
RPUSD4-204ENST00000530036 CCDC61Q9Y6R9 512 aa7.98□□□□□ -1.13
RPUSD4-204ENST00000530036 CD163L1Q9NR16 1453 aa7.98□□□□□ -1.13
RPUSD4-204ENST00000530036 USP54Q70EL1 1684 aa7.98□□□□□ -1.13
RPUSD4-204ENST00000530036 PNPLA6Q8IY17 1366 aa7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 JCADQ9P266 1359 aa7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 PLEKHG3A1L390 1219 aa7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 FOXO3O43524 673 aa7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 SLC24A1O60721 1099 aa7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 EIF4G2P78344 907 aaKnown RBP eCLIP7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 POTEAQ6S8J7 498 aa7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 PIK3C2AO00443 1686 aa7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 SBNO1A3KN83 1393 aa7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 NINLQ9Y2I6 1382 aa7.97□□□□□ -1.13
RPUSD4-204ENST00000530036 PHRF1Q9P1Y6 1649 aaKnown RBP7.96□□□□□ -1.13
RPUSD4-204ENST00000530036 USP6P35125 1406 aa7.96□□□□□ -1.13
RPUSD4-204ENST00000530036 CPSF1Q10570 1443 aaKnown RBP7.96□□□□□ -1.13
RPUSD4-204ENST00000530036 HSPA5P11021 654 aaKnown RBP7.96□□□□□ -1.14
RPUSD4-204ENST00000530036 PMFBP1Q8TBY8 1022 aa7.96□□□□□ -1.14
RPUSD4-204ENST00000530036 ACEP12821 1306 aa7.96□□□□□ -1.14
RPUSD4-204ENST00000530036 LRP6O75581 1613 aa7.96□□□□□ -1.14
RPUSD4-204ENST00000530036 SSH2Q76I76 1423 aa7.95□□□□□ -1.14
RPUSD4-204ENST00000530036 TMF1P82094 1093 aa7.95□□□□□ -1.14
RPUSD4-204ENST00000530036 LRRC59Q96AG4 307 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms