RNA–Protein interactions for RNA: ENST00000529500.1

PSMC3-206, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-206ENST00000529500 C14orf93Q9H972 538 aaKnown RBP19.09■□□□□ 0.65
PSMC3-206ENST00000529500 STK26Q9P289 416 aa19.08■□□□□ 0.64
PSMC3-206ENST00000529500 PRKRIP1Q9H875 184 aaPredicted RBP19.07■□□□□ 0.64
PSMC3-206ENST00000529500 MYOM2P54296 1465 aa19.07■□□□□ 0.64
PSMC3-206ENST00000529500 TMEM132EQ6IEE7 984 aa19.06■□□□□ 0.64
PSMC3-206ENST00000529500 DCCP43146 1447 aa19.06■□□□□ 0.64
PSMC3-206ENST00000529500 NBPF1Q3BBV0 1214 aa19.05■□□□□ 0.64
PSMC3-206ENST00000529500 CFAP70Q5T0N1 1121 aa19.05■□□□□ 0.64
PSMC3-206ENST00000529500 PIK3C2GO75747 1445 aa19.05■□□□□ 0.64
PSMC3-206ENST00000529500 PTCH1Q13635 1447 aa19.05■□□□□ 0.64
PSMC3-206ENST00000529500 XRN1Q8IZH2 1706 aaKnown RBP19.05■□□□□ 0.64
PSMC3-206ENST00000529500 ROBO2Q9HCK4 1378 aa19.05■□□□□ 0.64
PSMC3-206ENST00000529500 LRPPRCP42704 1394 aaKnown RBP19.04■□□□□ 0.64
PSMC3-206ENST00000529500 ABCC11Q96J66 1382 aa19.04■□□□□ 0.64
PSMC3-206ENST00000529500 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
PSMC3-206ENST00000529500 SIRT1Q96EB6 747 aa19.03■□□□□ 0.64
PSMC3-206ENST00000529500 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.01■□□□□ 0.63
PSMC3-206ENST00000529500 KIAA1210Q9ULL0 1709 aa19.01■□□□□ 0.63
PSMC3-206ENST00000529500 KTN1Q86UP2 1357 aaKnown RBP19.01■□□□□ 0.63
PSMC3-206ENST00000529500 BRINP3Q76B58 766 aa19■□□□□ 0.63
PSMC3-206ENST00000529500 NRXN1Q9ULB1 1477 aa18.99■□□□□ 0.63
PSMC3-206ENST00000529500 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
PSMC3-206ENST00000529500 YTHDC2Q9H6S0 1430 aaKnown RBP18.99■□□□□ 0.63
PSMC3-206ENST00000529500 SLC24A1O60721 1099 aa18.98■□□□□ 0.63
PSMC3-206ENST00000529500 TESK2Q96S53 571 aa18.98■□□□□ 0.63
PSMC3-206ENST00000529500 ROBO1Q9Y6N7 1651 aa18.98■□□□□ 0.63
PSMC3-206ENST00000529500 IFT172Q9UG01 1749 aa18.97■□□□□ 0.63
PSMC3-206ENST00000529500 TECPR2O15040 1411 aa18.97■□□□□ 0.63
PSMC3-206ENST00000529500 SETD1AO15047 1707 aaKnown RBP18.97■□□□□ 0.63
PSMC3-206ENST00000529500 TMF1P82094 1093 aa18.96■□□□□ 0.63
PSMC3-206ENST00000529500 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
PSMC3-206ENST00000529500 MST1RQ04912 1400 aa18.95■□□□□ 0.62
PSMC3-206ENST00000529500 POGKQ9P215 609 aa18.95■□□□□ 0.62
PSMC3-206ENST00000529500 EIF3AQ14152 1382 aaKnown RBP18.94■□□□□ 0.62
PSMC3-206ENST00000529500 JCADQ9P266 1359 aa18.93■□□□□ 0.62
PSMC3-206ENST00000529500 POLR3GLQ9BT43 218 aa18.93■□□□□ 0.62
PSMC3-206ENST00000529500 CDCA8Q53HL2 280 aa18.92■□□□□ 0.62
PSMC3-206ENST00000529500 LRRC59Q96AG4 307 aaKnown RBP18.92■□□□□ 0.62
PSMC3-206ENST00000529500 PRAM1Q96QH2 718 aa18.92■□□□□ 0.62
PSMC3-206ENST00000529500 TRAK1Q9UPV9 953 aa18.92■□□□□ 0.62
PSMC3-206ENST00000529500 RALBP1Q15311 655 aa18.91■□□□□ 0.62
PSMC3-206ENST00000529500 C1orf167Q5SNV9 1468 aa18.9■□□□□ 0.62
PSMC3-206ENST00000529500 ESCO1Q5FWF5 840 aa18.9■□□□□ 0.62
PSMC3-206ENST00000529500 ORAI2Q96SN7 254 aa18.9■□□□□ 0.62
PSMC3-206ENST00000529500 MRS2Q9HD23 443 aa18.9■□□□□ 0.62
PSMC3-206ENST00000529500 SAFB2Q14151 953 aaKnown RBP eCLIP18.89■□□□□ 0.61
PSMC3-206ENST00000529500 PLEKHH1Q9ULM0 1364 aa18.89■□□□□ 0.61
PSMC3-206ENST00000529500 ASXL1Q8IXJ9 1541 aa18.88■□□□□ 0.61
PSMC3-206ENST00000529500 NUTM2FA1L443 756 aa18.87■□□□□ 0.61
PSMC3-206ENST00000529500 PHLPP1O60346 1717 aa18.87■□□□□ 0.61
PSMC3-206ENST00000529500 NALCNQ8IZF0 1738 aa18.86■□□□□ 0.61
PSMC3-206ENST00000529500 MED1Q15648 1581 aaPredicted RBP18.86■□□□□ 0.61
PSMC3-206ENST00000529500 SPATA31A6Q5VVP1 1343 aa18.86■□□□□ 0.61
PSMC3-206ENST00000529500 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
PSMC3-206ENST00000529500 BRD4O60885 1362 aaPredicted RBP18.84■□□□□ 0.61
PSMC3-206ENST00000529500 SBNO2Q9Y2G9 1366 aa18.84■□□□□ 0.61
PSMC3-206ENST00000529500 CCDC184Q52MB2 194 aa18.84■□□□□ 0.61
PSMC3-206ENST00000529500 DDX17Q92841 729 aaKnown RBP18.84■□□□□ 0.61
PSMC3-206ENST00000529500 KNDC1Q76NI1 1749 aa18.83■□□□□ 0.61
PSMC3-206ENST00000529500 NPHP3Q7Z494 1330 aa18.83■□□□□ 0.61
PSMC3-206ENST00000529500 MYBBP1AQ9BQG0 1328 aaKnown RBP18.83■□□□□ 0.61
PSMC3-206ENST00000529500 PER1O15534 1290 aaPredicted RBP18.83■□□□□ 0.6
PSMC3-206ENST00000529500 HNRNPUQ00839 825 aaKnown RBP eCLIP18.83■□□□□ 0.6
PSMC3-206ENST00000529500 DLC1Q96QB1 1528 aa18.83■□□□□ 0.6
PSMC3-206ENST00000529500 CDC42BPGQ6DT37 1551 aa18.82■□□□□ 0.6
PSMC3-206ENST00000529500 MEX3CQ5U5Q3 659 aaKnown RBP18.82■□□□□ 0.6
PSMC3-206ENST00000529500 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
PSMC3-206ENST00000529500 ADGRB1O14514 1584 aa18.81■□□□□ 0.6
PSMC3-206ENST00000529500 SOS2Q07890 1332 aaPredicted RBP18.81■□□□□ 0.6
PSMC3-206ENST00000529500 FOXO3O43524 673 aa18.81■□□□□ 0.6
PSMC3-206ENST00000529500 COL16A1Q07092 1604 aaPredicted RBP18.81■□□□□ 0.6
PSMC3-206ENST00000529500 MINK1Q8N4C8 1332 aaPredicted RBP18.8■□□□□ 0.6
PSMC3-206ENST00000529500 NUTM2BA6NNL0 878 aaPredicted RBP18.79■□□□□ 0.6
PSMC3-206ENST00000529500 NUTM2EB1AL46 878 aaPredicted RBP18.79■□□□□ 0.6
PSMC3-206ENST00000529500 NUTM2AQ8IVF1 878 aaPredicted RBP18.79■□□□□ 0.6
PSMC3-206ENST00000529500 PHF8Q9UPP1 1060 aa18.78■□□□□ 0.6
PSMC3-206ENST00000529500 ZBED9Q6R2W3 1325 aa18.77■□□□□ 0.6
PSMC3-206ENST00000529500 WASLO00401 505 aaPredicted RBP18.77■□□□□ 0.6
PSMC3-206ENST00000529500 PSME1Q06323 249 aa18.77■□□□□ 0.6
PSMC3-206ENST00000529500 PANK3Q9H999 370 aa18.77■□□□□ 0.6
PSMC3-206ENST00000529500 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
PSMC3-206ENST00000529500 FAM9BQ8IZU0 186 aa18.76■□□□□ 0.59
PSMC3-206ENST00000529500 TMC1Q8TDI8 760 aa18.76■□□□□ 0.59
PSMC3-206ENST00000529500 KRT28Q7Z3Y7 464 aa18.75■□□□□ 0.59
PSMC3-206ENST00000529500 PNPLA6Q8IY17 1366 aa18.74■□□□□ 0.59
PSMC3-206ENST00000529500 NPC1L1Q9UHC9 1359 aa18.74■□□□□ 0.59
PSMC3-206ENST00000529500 PNISRQ8TF01 805 aaKnown RBP18.74■□□□□ 0.59
PSMC3-206ENST00000529500 RGS17Q9UGC6 210 aaPredicted RBP18.74■□□□□ 0.59
PSMC3-206ENST00000529500 NHSL1Q5SYE7 1610 aa18.74■□□□□ 0.59
PSMC3-206ENST00000529500 INSRP06213 1382 aa18.73■□□□□ 0.59
PSMC3-206ENST00000529500 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
PSMC3-206ENST00000529500 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
PSMC3-206ENST00000529500 ANKARQ7Z5J8 1434 aa18.73■□□□□ 0.59
PSMC3-206ENST00000529500 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
PSMC3-206ENST00000529500 PUS7Q96PZ0 661 aaKnown RBP18.72■□□□□ 0.59
PSMC3-206ENST00000529500 PMFBP1Q8TBY8 1022 aa18.71■□□□□ 0.59
PSMC3-206ENST00000529500 CDK19Q9BWU1 502 aa18.71■□□□□ 0.59
PSMC3-206ENST00000529500 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
PSMC3-206ENST00000529500 FMN2Q9NZ56 1722 aa18.7■□□□□ 0.58
PSMC3-206ENST00000529500 SHPRHQ149N8 1683 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms