RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 KDM2AQ9Y2K7 1162 aa25.22■■□□□ 1.63
USP35-202ENST00000528910 ADGRB2O60241 1585 aa25.22■■□□□ 1.63
USP35-202ENST00000528910 STK26Q9P289 416 aa25.21■■□□□ 1.63
USP35-202ENST00000528910 C1orf167Q5SNV9 1468 aa25.21■■□□□ 1.63
USP35-202ENST00000528910 BRINP3Q76B58 766 aa25.18■■□□□ 1.62
USP35-202ENST00000528910 SHPRHQ149N8 1683 aa25.17■■□□□ 1.62
USP35-202ENST00000528910 ILDR2Q71H61 639 aa25.16■■□□□ 1.62
USP35-202ENST00000528910 WAPLQ7Z5K2 1190 aa25.16■■□□□ 1.62
USP35-202ENST00000528910 TRPM1Q7Z4N2 1603 aa25.15■■□□□ 1.62
USP35-202ENST00000528910 SIN3AQ96ST3 1273 aa25.14■■□□□ 1.62
USP35-202ENST00000528910 KIF1AQ12756 1690 aa25.11■■□□□ 1.61
USP35-202ENST00000528910 RGPD8O14715 1765 aaPredicted RBP25.1■■□□□ 1.61
USP35-202ENST00000528910 L3MBTL2Q969R5 705 aa25.1■■□□□ 1.61
USP35-202ENST00000528910 JCADQ9P266 1359 aa25.09■■□□□ 1.61
USP35-202ENST00000528910 PRAM1Q96QH2 718 aa25.09■■□□□ 1.61
USP35-202ENST00000528910 USP32Q8NFA0 1604 aa25.08■■□□□ 1.61
USP35-202ENST00000528910 TRAK1Q9UPV9 953 aa25.05■■□□□ 1.6
USP35-202ENST00000528910 NEUROD1Q13562 356 aa25.04■■□□□ 1.6
USP35-202ENST00000528910 ORAI2Q96SN7 254 aa25.03■■□□□ 1.6
USP35-202ENST00000528910 ANKARQ7Z5J8 1434 aa25.03■■□□□ 1.6
USP35-202ENST00000528910 POGKQ9P215 609 aa25.02■■□□□ 1.6
USP35-202ENST00000528910 PXDNQ92626 1479 aa25.01■■□□□ 1.59
USP35-202ENST00000528910 TULP4Q9NRJ4 1543 aa25.01■■□□□ 1.59
USP35-202ENST00000528910 QRICH2Q9H0J4 1663 aa25■■□□□ 1.59
USP35-202ENST00000528910 ITSN1Q15811 1721 aa25■■□□□ 1.59
USP35-202ENST00000528910 SOS2Q07890 1332 aaPredicted RBP24.99■■□□□ 1.59
USP35-202ENST00000528910 SAFB2Q14151 953 aaKnown RBP eCLIP24.99■■□□□ 1.59
USP35-202ENST00000528910 NBPF1Q3BBV0 1214 aa24.99■■□□□ 1.59
USP35-202ENST00000528910 COL22A1Q8NFW1 1626 aaPredicted RBP24.99■■□□□ 1.59
USP35-202ENST00000528910 LRP6O75581 1613 aa24.98■■□□□ 1.59
USP35-202ENST00000528910 EIF3AQ14152 1382 aaKnown RBP24.97■■□□□ 1.59
USP35-202ENST00000528910 TONSLQ96HA7 1378 aa24.97■■□□□ 1.59
USP35-202ENST00000528910 SPATA31A6Q5VVP1 1343 aa24.97■■□□□ 1.59
USP35-202ENST00000528910 DDX17Q92841 729 aaKnown RBP24.97■■□□□ 1.59
USP35-202ENST00000528910 TOPAZ1Q8N9V7 1692 aa24.96■■□□□ 1.59
USP35-202ENST00000528910 PNPLA6Q8IY17 1366 aa24.95■■□□□ 1.59
USP35-202ENST00000528910 ESCO1Q5FWF5 840 aa24.95■■□□□ 1.58
USP35-202ENST00000528910 NPHP3Q7Z494 1330 aa24.94■■□□□ 1.58
USP35-202ENST00000528910 RALGAPBQ86X10 1494 aa24.94■■□□□ 1.58
USP35-202ENST00000528910 GPRASP1Q5JY77 1395 aa24.93■■□□□ 1.58
USP35-202ENST00000528910 MINK1Q8N4C8 1332 aaPredicted RBP24.93■■□□□ 1.58
USP35-202ENST00000528910 NUTM2FA1L443 756 aa24.93■■□□□ 1.58
USP35-202ENST00000528910 LRRC59Q96AG4 307 aaKnown RBP24.93■■□□□ 1.58
USP35-202ENST00000528910 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
USP35-202ENST00000528910 ATP7BP35670 1465 aa24.93■■□□□ 1.58
USP35-202ENST00000528910 ROCK2O75116 1388 aaKnown RBP24.91■■□□□ 1.58
USP35-202ENST00000528910 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
USP35-202ENST00000528910 WASLO00401 505 aaPredicted RBP24.89■■□□□ 1.58
USP35-202ENST00000528910 NBPF8Q3BBV2 869 aa24.89■■□□□ 1.58
USP35-202ENST00000528910 TRPM3Q9HCF6 1732 aaPredicted RBP24.89■■□□□ 1.57
USP35-202ENST00000528910 CLSPNQ9HAW4 1339 aa24.88■■□□□ 1.57
USP35-202ENST00000528910 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
USP35-202ENST00000528910 PRR36Q9H6K5 1346 aa24.87■■□□□ 1.57
USP35-202ENST00000528910 CENPJQ9HC77 1338 aaPredicted RBP24.86■■□□□ 1.57
USP35-202ENST00000528910 FOXO3O43524 673 aa24.86■■□□□ 1.57
USP35-202ENST00000528910 PHF8Q9UPP1 1060 aa24.86■■□□□ 1.57
USP35-202ENST00000528910 MARF1Q9Y4F3 1742 aaKnown RBP24.86■■□□□ 1.57
USP35-202ENST00000528910 RGS17Q9UGC6 210 aaPredicted RBP24.84■■□□□ 1.57
USP35-202ENST00000528910 ABCA3Q99758 1704 aa24.83■■□□□ 1.57
USP35-202ENST00000528910 ALS2Q96Q42 1657 aa24.82■■□□□ 1.56
USP35-202ENST00000528910 TNS3Q68CZ2 1445 aa24.81■■□□□ 1.56
USP35-202ENST00000528910 SOCS7O14512 581 aa24.81■■□□□ 1.56
USP35-202ENST00000528910 XPCQ01831 940 aaPredicted RBP24.8■■□□□ 1.56
USP35-202ENST00000528910 SBNO1A3KN83 1393 aa24.8■■□□□ 1.56
USP35-202ENST00000528910 SPATA31A3Q5VYP0 1347 aa24.78■■□□□ 1.56
USP35-202ENST00000528910 CDK19Q9BWU1 502 aa24.77■■□□□ 1.56
USP35-202ENST00000528910 SBNO2Q9Y2G9 1366 aa24.77■■□□□ 1.56
USP35-202ENST00000528910 CRYBG1Q9Y4K1 1723 aa24.76■■□□□ 1.55
USP35-202ENST00000528910 KRT28Q7Z3Y7 464 aa24.75■■□□□ 1.55
USP35-202ENST00000528910 NUDT16Q96DE0 195 aaKnown RBP24.75■■□□□ 1.55
USP35-202ENST00000528910 NUTM2BA6NNL0 878 aaPredicted RBP24.74■■□□□ 1.55
USP35-202ENST00000528910 NUTM2EB1AL46 878 aaPredicted RBP24.74■■□□□ 1.55
USP35-202ENST00000528910 MEX3CQ5U5Q3 659 aaKnown RBP24.74■■□□□ 1.55
USP35-202ENST00000528910 NUTM2AQ8IVF1 878 aaPredicted RBP24.74■■□□□ 1.55
USP35-202ENST00000528910 PMFBP1Q8TBY8 1022 aa24.74■■□□□ 1.55
USP35-202ENST00000528910 POLR3AO14802 1390 aaPredicted RBP24.74■■□□□ 1.55
USP35-202ENST00000528910 PSME1Q06323 249 aa24.72■■□□□ 1.55
USP35-202ENST00000528910 CARD11Q9BXL7 1154 aa24.72■■□□□ 1.55
USP35-202ENST00000528910 TIMELESSQ9UNS1 1208 aa24.72■■□□□ 1.55
USP35-202ENST00000528910 ARHGEF10O15013 1369 aa24.71■■□□□ 1.55
USP35-202ENST00000528910 POTEAQ6S8J7 498 aa24.7■■□□□ 1.54
USP35-202ENST00000528910 CCDC61Q9Y6R9 512 aa24.7■■□□□ 1.54
USP35-202ENST00000528910 PPIP5K1Q6PFW1 1433 aa24.69■■□□□ 1.54
USP35-202ENST00000528910 EVC2Q86UK5 1308 aa24.68■■□□□ 1.54
USP35-202ENST00000528910 AKAP12Q02952 1782 aa24.68■■□□□ 1.54
USP35-202ENST00000528910 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.68■■□□□ 1.54
USP35-202ENST00000528910 PLEKHG3A1L390 1219 aa24.67■■□□□ 1.54
USP35-202ENST00000528910 SRPK2P78362 688 aaKnown RBP24.67■■□□□ 1.54
USP35-202ENST00000528910 NGDNQ8NEJ9 315 aaKnown RBP24.66■■□□□ 1.54
USP35-202ENST00000528910 PHRF1Q9P1Y6 1649 aaKnown RBP24.65■■□□□ 1.54
USP35-202ENST00000528910 ZNF772Q68DY9 489 aaPredicted RBP24.65■■□□□ 1.54
USP35-202ENST00000528910 CABP2Q9NPB3 220 aa24.65■■□□□ 1.54
USP35-202ENST00000528910 AFF2P51816 1311 aa24.64■■□□□ 1.54
USP35-202ENST00000528910 PLCH1Q4KWH8 1693 aa24.64■■□□□ 1.53
USP35-202ENST00000528910 ADAMTS2O95450 1211 aa24.63■■□□□ 1.53
USP35-202ENST00000528910 C8orf37Q96NL8 207 aa24.63■■□□□ 1.53
USP35-202ENST00000528910 NRKQ7Z2Y5 1582 aa24.63■■□□□ 1.53
USP35-202ENST00000528910 ACEP12821 1306 aa24.62■■□□□ 1.53
USP35-202ENST00000528910 NWD2Q9ULI1 1742 aa24.62■■□□□ 1.53
USP35-202ENST00000528910 MON2Q7Z3U7 1717 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms