RNA–Protein interactions for RNA: ENST00000528256.1

PICALM-208, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 4

Gene PICALM, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-208ENST00000528256 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
PICALM-208ENST00000528256 PPEF1O14829 653 aaPredicted RBP11.51□□□□□ -0.57
PICALM-208ENST00000528256 USB1Q9BQ65 265 aaKnown RBP11.51□□□□□ -0.57
PICALM-208ENST00000528256 MSS51Q4VC12 460 aa11.5□□□□□ -0.57
PICALM-208ENST00000528256 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
PICALM-208ENST00000528256 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
PICALM-208ENST00000528256 ANKLE1Q8NAG6 615 aa11.49□□□□□ -0.57
PICALM-208ENST00000528256 PRDM9Q9NQV7 894 aa11.49□□□□□ -0.57
PICALM-208ENST00000528256 PRKCSHP14314 528 aaPredicted RBP11.48□□□□□ -0.57
PICALM-208ENST00000528256 GJA5P36382 358 aa11.48□□□□□ -0.57
PICALM-208ENST00000528256 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
PICALM-208ENST00000528256 MYSM1Q5VVJ2 828 aa11.48□□□□□ -0.57
PICALM-208ENST00000528256 FAM117AQ9C073 453 aa11.48□□□□□ -0.57
PICALM-208ENST00000528256 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
PICALM-208ENST00000528256 SPTLC1O15269 473 aa11.47□□□□□ -0.57
PICALM-208ENST00000528256 RIC3Q7Z5B4 369 aa11.47□□□□□ -0.57
PICALM-208ENST00000528256 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
PICALM-208ENST00000528256 IRX2Q9BZI1 471 aaPredicted RBP11.47□□□□□ -0.57
PICALM-208ENST00000528256 PRKD2Q9BZL6 878 aa11.47□□□□□ -0.57
PICALM-208ENST00000528256 RETREG3Q86VR2 466 aa11.46□□□□□ -0.57
PICALM-208ENST00000528256 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.57
PICALM-208ENST00000528256 MMP16P51512 607 aa11.44□□□□□ -0.58
PICALM-208ENST00000528256 PCDHB15Q9Y5E8 787 aa11.44□□□□□ -0.58
PICALM-208ENST00000528256 V9GY48 417 aaPredicted RBP11.44□□□□□ -0.58
PICALM-208ENST00000528256 UNC13AQ9UPW8 1703 aa11.43□□□□□ -0.58
PICALM-208ENST00000528256 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
PICALM-208ENST00000528256 MTMR2Q13614 643 aa11.43□□□□□ -0.58
PICALM-208ENST00000528256 FCF1Q9Y324 198 aaKnown RBP11.43□□□□□ -0.58
PICALM-208ENST00000528256 DXOO77932 396 aaKnown RBP11.42□□□□□ -0.58
PICALM-208ENST00000528256 LIMD1Q9UGP4 676 aa11.42□□□□□ -0.58
PICALM-208ENST00000528256 PLEKHG3A1L390 1219 aa11.41□□□□□ -0.58
PICALM-208ENST00000528256 SLC19A1P41440 591 aa11.41□□□□□ -0.58
PICALM-208ENST00000528256 CSPP1Q1MSJ5 1256 aa11.41□□□□□ -0.58
PICALM-208ENST00000528256 PLA2G2CQ5R387 149 aa11.41□□□□□ -0.58
PICALM-208ENST00000528256 POLR3EQ9NVU0 708 aa11.41□□□□□ -0.58
PICALM-208ENST00000528256 SPDYE5A6NIY4 337 aa11.4□□□□□ -0.58
PICALM-208ENST00000528256 JUNDP17535 347 aa11.4□□□□□ -0.58
PICALM-208ENST00000528256 EMID1Q96A84 441 aaPredicted RBP11.4□□□□□ -0.58
PICALM-208ENST00000528256 ZBTB3Q9H5J0 574 aa11.4□□□□□ -0.58
PICALM-208ENST00000528256 HRCP23327 699 aa11.39□□□□□ -0.59
PICALM-208ENST00000528256 CLK2P49760 499 aaKnown RBP11.39□□□□□ -0.59
PICALM-208ENST00000528256 TUSC1Q2TAM9 212 aa11.39□□□□□ -0.59
PICALM-208ENST00000528256 PRPF38BQ5VTL8 546 aaKnown RBP11.39□□□□□ -0.59
PICALM-208ENST00000528256 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
PICALM-208ENST00000528256 LIAT1Q6ZQX7 453 aa11.38□□□□□ -0.59
PICALM-208ENST00000528256 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
PICALM-208ENST00000528256 SKIV2LQ15477 1246 aaKnown RBP11.37□□□□□ -0.59
PICALM-208ENST00000528256 SH3D19Q5HYK7 790 aa11.37□□□□□ -0.59
PICALM-208ENST00000528256 QPCTQ16769 361 aa11.36□□□□□ -0.59
PICALM-208ENST00000528256 BICRAQ9NZM4 1560 aa11.36□□□□□ -0.59
PICALM-208ENST00000528256 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
PICALM-208ENST00000528256 NUTM2BA6NNL0 878 aaPredicted RBP11.35□□□□□ -0.59
PICALM-208ENST00000528256 NUTM2EB1AL46 878 aaPredicted RBP11.35□□□□□ -0.59
PICALM-208ENST00000528256 NUTM2DQ5VT03 806 aaPredicted RBP11.35□□□□□ -0.59
PICALM-208ENST00000528256 NUTM2AQ8IVF1 878 aaPredicted RBP11.35□□□□□ -0.59
PICALM-208ENST00000528256 CCDC24Q8N4L8 307 aa11.35□□□□□ -0.59
PICALM-208ENST00000528256 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
PICALM-208ENST00000528256 CFAP99D6REC4 459 aa11.34□□□□□ -0.59
PICALM-208ENST00000528256 LILRB3O75022 631 aa11.34□□□□□ -0.59
PICALM-208ENST00000528256 SPRYD7Q5W111 196 aa11.34□□□□□ -0.59
PICALM-208ENST00000528256 RPIAP49247 311 aa11.33□□□□□ -0.6
PICALM-208ENST00000528256 DESI1Q6ICB0 168 aa11.33□□□□□ -0.6
PICALM-208ENST00000528256 ZBTB24O43167 697 aaPredicted RBP11.32□□□□□ -0.6
PICALM-208ENST00000528256 PROCA1Q8NCQ7 364 aaPredicted RBP11.32□□□□□ -0.6
PICALM-208ENST00000528256 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
PICALM-208ENST00000528256 ATP1B4Q9UN42 357 aaPredicted RBP11.32□□□□□ -0.6
PICALM-208ENST00000528256 ZNF598Q86UK7 904 aaKnown RBP11.31□□□□□ -0.6
PICALM-208ENST00000528256 PTPRNQ16849 979 aa11.3□□□□□ -0.6
PICALM-208ENST00000528256 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
PICALM-208ENST00000528256 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
PICALM-208ENST00000528256 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
PICALM-208ENST00000528256 ZNF697Q5TEC3 545 aa11.29□□□□□ -0.6
PICALM-208ENST00000528256 CECR2Q9BXF3 1484 aa11.28□□□□□ -0.6
PICALM-208ENST00000528256 LYPD8Q6UX82 237 aa11.28□□□□□ -0.6
PICALM-208ENST00000528256 TSC1Q92574 1164 aa11.28□□□□□ -0.6
PICALM-208ENST00000528256 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
PICALM-208ENST00000528256 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
PICALM-208ENST00000528256 SHROOM4Q9ULL8 1493 aa11.27□□□□□ -0.6
PICALM-208ENST00000528256 EVA1BQ9NVM1 165 aa11.26□□□□□ -0.61
PICALM-208ENST00000528256 GFRA3O60609 400 aa11.25□□□□□ -0.61
PICALM-208ENST00000528256 TRIM32Q13049 653 aa11.25□□□□□ -0.61
PICALM-208ENST00000528256 PTCRAQ6ISU1 281 aaPredicted RBP11.25□□□□□ -0.61
PICALM-208ENST00000528256 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
PICALM-208ENST00000528256 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
PICALM-208ENST00000528256 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
PICALM-208ENST00000528256 CC2D2AQ9P2K1 1620 aa11.24□□□□□ -0.61
PICALM-208ENST00000528256 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
PICALM-208ENST00000528256 KCNH2Q12809 1159 aa11.23□□□□□ -0.61
PICALM-208ENST00000528256 PPP2R2DQ66LE6 453 aa11.23□□□□□ -0.61
PICALM-208ENST00000528256 TRIM67Q6ZTA4 783 aa11.23□□□□□ -0.61
PICALM-208ENST00000528256 PER1O15534 1290 aaPredicted RBP11.22□□□□□ -0.61
PICALM-208ENST00000528256 LAPTM4AQ15012 233 aa11.22□□□□□ -0.61
PICALM-208ENST00000528256 CTHP32929 405 aa11.21□□□□□ -0.61
PICALM-208ENST00000528256 NRG2O14511 850 aaPredicted RBP11.2□□□□□ -0.62
PICALM-208ENST00000528256 GDF9O60383 454 aa11.2□□□□□ -0.62
PICALM-208ENST00000528256 FOXC1Q12948 553 aa11.2□□□□□ -0.62
PICALM-208ENST00000528256 Q6ZNB5 142 aa11.2□□□□□ -0.62
PICALM-208ENST00000528256 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
PICALM-208ENST00000528256 PKD2L1Q9P0L9 805 aa11.2□□□□□ -0.62
PICALM-208ENST00000528256 TNFRSF10AO00220 468 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms