RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 WNT7AO00755 349 aa8.05□□□□□ -1.12
CLNS1A-209ENST00000527299 SMPD1P17405 629 aa8.05□□□□□ -1.12
CLNS1A-209ENST00000527299 NLRP7Q8WX94 980 aa8.05□□□□□ -1.12
CLNS1A-209ENST00000527299 RNF19BQ6ZMZ0 732 aa8.04□□□□□ -1.12
CLNS1A-209ENST00000527299 SNIP1Q8TAD8 396 aaKnown RBP8.04□□□□□ -1.12
CLNS1A-209ENST00000527299 PHOX2BQ99453 314 aa8.04□□□□□ -1.12
CLNS1A-209ENST00000527299 STK17AQ9UEE5 414 aa8.04□□□□□ -1.12
CLNS1A-209ENST00000527299 MMP16P51512 607 aa8.02□□□□□ -1.13
CLNS1A-209ENST00000527299 TRIM32Q13049 653 aa8.02□□□□□ -1.13
CLNS1A-209ENST00000527299 SMYD5Q6GMV2 418 aa8.02□□□□□ -1.13
CLNS1A-209ENST00000527299 ATP13A2Q9NQ11 1180 aa8.02□□□□□ -1.13
CLNS1A-209ENST00000527299 INSM1Q01101 510 aaPredicted RBP8.01□□□□□ -1.13
CLNS1A-209ENST00000527299 GRIPAP1Q4V328 841 aa8.01□□□□□ -1.13
CLNS1A-209ENST00000527299 LCE2CQ5TA81 110 aa8.01□□□□□ -1.13
CLNS1A-209ENST00000527299 SNRPBP14678 240 aaKnown RBP8□□□□□ -1.13
CLNS1A-209ENST00000527299 MRGPRX2Q96LB1 330 aa8□□□□□ -1.13
CLNS1A-209ENST00000527299 J3QL48 77 aa7.99□□□□□ -1.13
CLNS1A-209ENST00000527299 Q3C1V9 767 aa7.99□□□□□ -1.13
CLNS1A-209ENST00000527299 TRIM47Q96LD4 638 aa7.99□□□□□ -1.13
CLNS1A-209ENST00000527299 SENP2Q9HC62 589 aa7.99□□□□□ -1.13
CLNS1A-209ENST00000527299 TERTO14746 1132 aaKnown RBP7.98□□□□□ -1.13
CLNS1A-209ENST00000527299 REPIN1Q9BWE0 567 aaKnown RBP7.97□□□□□ -1.13
CLNS1A-209ENST00000527299 DXOO77932 396 aaKnown RBP7.96□□□□□ -1.14
CLNS1A-209ENST00000527299 HPS1Q92902 700 aa7.96□□□□□ -1.14
CLNS1A-209ENST00000527299 CD46P15529 392 aa7.95□□□□□ -1.14
CLNS1A-209ENST00000527299 KIFC2Q96AC6 838 aa7.95□□□□□ -1.14
CLNS1A-209ENST00000527299 USB1Q9BQ65 265 aaKnown RBP7.95□□□□□ -1.14
CLNS1A-209ENST00000527299 SKOR1P84550 965 aa7.93□□□□□ -1.14
CLNS1A-209ENST00000527299 RC3H1Q5TC82 1133 aaKnown RBP7.93□□□□□ -1.14
CLNS1A-209ENST00000527299 KDM4AO75164 1064 aa7.92□□□□□ -1.14
CLNS1A-209ENST00000527299 WNT7BP56706 349 aa7.92□□□□□ -1.14
CLNS1A-209ENST00000527299 GPIHBP1Q8IV16 184 aa7.91□□□□□ -1.14
CLNS1A-209ENST00000527299 CCDC24Q8N4L8 307 aa7.9□□□□□ -1.14
CLNS1A-209ENST00000527299 USP46P62068 366 aa7.89□□□□□ -1.15
CLNS1A-209ENST00000527299 HLA-CQ95604 372 aa7.88□□□□□ -1.15
CLNS1A-209ENST00000527299 SIAH2O43255 324 aa7.87□□□□□ -1.15
CLNS1A-209ENST00000527299 HOXA2O43364 376 aa7.87□□□□□ -1.15
CLNS1A-209ENST00000527299 ALDH1A1P00352 501 aa7.87□□□□□ -1.15
CLNS1A-209ENST00000527299 MAP2K5Q13163 448 aa7.86□□□□□ -1.15
CLNS1A-209ENST00000527299 SLC16A10Q8TF71 515 aa7.86□□□□□ -1.15
CLNS1A-209ENST00000527299 NXF1Q9UBU9 619 aaKnown RBP7.86□□□□□ -1.15
CLNS1A-209ENST00000527299 JUNDP17535 347 aa7.85□□□□□ -1.15
CLNS1A-209ENST00000527299 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
CLNS1A-209ENST00000527299 NPAS3Q8IXF0 933 aa7.84□□□□□ -1.15
CLNS1A-209ENST00000527299 FAM181BA6NEQ2 426 aa7.83□□□□□ -1.16
CLNS1A-209ENST00000527299 IRF6O14896 467 aa7.83□□□□□ -1.16
CLNS1A-209ENST00000527299 MDM2Q00987 491 aaPredicted RBP7.83□□□□□ -1.16
CLNS1A-209ENST00000527299 GUCA2AQ02747 115 aa7.83□□□□□ -1.16
CLNS1A-209ENST00000527299 TRIM46Q7Z4K8 759 aa7.83□□□□□ -1.16
CLNS1A-209ENST00000527299 GMPRP36959 345 aa7.82□□□□□ -1.16
CLNS1A-209ENST00000527299 PTCRAQ6ISU1 281 aaPredicted RBP7.82□□□□□ -1.16
CLNS1A-209ENST00000527299 SYMPKQ92797 1274 aaKnown RBP7.82□□□□□ -1.16
CLNS1A-209ENST00000527299 CAPN5O15484 640 aaPredicted RBP7.81□□□□□ -1.16
CLNS1A-209ENST00000527299 BMP1P13497 986 aa7.81□□□□□ -1.16
CLNS1A-209ENST00000527299 RETREG3Q86VR2 466 aa7.81□□□□□ -1.16
CLNS1A-209ENST00000527299 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
CLNS1A-209ENST00000527299 IRF7Q92985 503 aa7.81□□□□□ -1.16
CLNS1A-209ENST00000527299 NUDT12Q9BQG2 462 aa7.81□□□□□ -1.16
CLNS1A-209ENST00000527299 ZSCAN1Q8NBB4 408 aa7.8□□□□□ -1.16
CLNS1A-209ENST00000527299 WASF2Q9Y6W5 498 aa7.8□□□□□ -1.16
CLNS1A-209ENST00000527299 MINK1Q8N4C8 1332 aaPredicted RBP7.79□□□□□ -1.16
CLNS1A-209ENST00000527299 SH3BP2P78314 561 aa7.79□□□□□ -1.16
CLNS1A-209ENST00000527299 H3BM21 787 aa7.78□□□□□ -1.16
CLNS1A-209ENST00000527299 GPCPD1Q9NPB8 672 aa7.77□□□□□ -1.17
CLNS1A-209ENST00000527299 FAM217BQ9NTX9 383 aaPredicted RBP7.77□□□□□ -1.17
CLNS1A-209ENST00000527299 VEGFBP49765 207 aa7.76□□□□□ -1.17
CLNS1A-209ENST00000527299 ERBB4Q15303 1308 aa7.76□□□□□ -1.17
CLNS1A-209ENST00000527299 CCNYL3P0C7X3 344 aa7.75□□□□□ -1.17
CLNS1A-209ENST00000527299 CLCN1P35523 988 aa7.75□□□□□ -1.17
CLNS1A-209ENST00000527299 PLCB2Q00722 1185 aa7.75□□□□□ -1.17
CLNS1A-209ENST00000527299 NUTM1Q86Y26 1132 aa7.75□□□□□ -1.17
CLNS1A-209ENST00000527299 CCDC102AQ96A19 550 aa7.75□□□□□ -1.17
CLNS1A-209ENST00000527299 ZFP42Q96MM3 310 aa7.75□□□□□ -1.17
CLNS1A-209ENST00000527299 PCDHGC3Q9UN70 934 aa7.75□□□□□ -1.17
CLNS1A-209ENST00000527299 MS4A1P11836 297 aa7.74□□□□□ -1.17
CLNS1A-209ENST00000527299 PTPRNQ16849 979 aa7.74□□□□□ -1.17
CLNS1A-209ENST00000527299 EVA1BQ9NVM1 165 aa7.74□□□□□ -1.17
CLNS1A-209ENST00000527299 FDX1P10109 184 aa7.73□□□□□ -1.17
CLNS1A-209ENST00000527299 MPNDQ8N594 471 aa7.73□□□□□ -1.17
CLNS1A-209ENST00000527299 UNC93B1Q9H1C4 597 aa7.73□□□□□ -1.17
CLNS1A-209ENST00000527299 C6orf229H3BNL8 230 aa7.72□□□□□ -1.17
CLNS1A-209ENST00000527299 TLL2Q9Y6L7 1015 aa7.72□□□□□ -1.17
CLNS1A-209ENST00000527299 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.18
CLNS1A-209ENST00000527299 VARSP26640 1264 aaKnown RBP7.71□□□□□ -1.18
CLNS1A-209ENST00000527299 KCNH2Q12809 1159 aa7.71□□□□□ -1.18
CLNS1A-209ENST00000527299 BAP1Q92560 729 aa7.71□□□□□ -1.18
CLNS1A-209ENST00000527299 KRTAP4-6Q9BYQ5 205 aa7.71□□□□□ -1.18
CLNS1A-209ENST00000527299 PLEKHG3A1L390 1219 aa7.7□□□□□ -1.18
CLNS1A-209ENST00000527299 NNTQ13423 1086 aa7.7□□□□□ -1.18
CLNS1A-209ENST00000527299 LINC01559Q495D7 138 aa7.7□□□□□ -1.18
CLNS1A-209ENST00000527299 MRPL14Q6P1L8 145 aaKnown RBP7.7□□□□□ -1.18
CLNS1A-209ENST00000527299 VSIG8P0DPA2 414 aa7.69□□□□□ -1.18
CLNS1A-209ENST00000527299 TIMP2P16035 220 aa7.69□□□□□ -1.18
CLNS1A-209ENST00000527299 ZNF511Q8NB15 262 aa7.69□□□□□ -1.18
CLNS1A-209ENST00000527299 SCARF1Q14162 830 aa7.68□□□□□ -1.18
CLNS1A-209ENST00000527299 SPIRE2Q8WWL2 714 aa7.68□□□□□ -1.18
CLNS1A-209ENST00000527299 KLF16Q9BXK1 252 aaPredicted RBP7.68□□□□□ -1.18
CLNS1A-209ENST00000527299 TULP1O00294 542 aaPredicted RBP7.67□□□□□ -1.18
CLNS1A-209ENST00000527299 ADH1CP00326 375 aa7.67□□□□□ -1.18
CLNS1A-209ENST00000527299 DESI1Q6ICB0 168 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms