RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 PIP4K2AP48426 406 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-213ENST00000526357 NINLQ9Y2I6 1382 aa11.33□□□□□ -0.6
CTNND1-213ENST00000526357 BAZ1AQ9NRL2 1556 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-213ENST00000526357 COG6Q9Y2V7 657 aa11.32□□□□□ -0.6
CTNND1-213ENST00000526357 NEFHP12036 1026 aa11.32□□□□□ -0.6
CTNND1-213ENST00000526357 MEX3CQ5U5Q3 659 aaKnown RBP11.32□□□□□ -0.6
CTNND1-213ENST00000526357 TSPYL1Q9H0U9 437 aa11.32□□□□□ -0.6
CTNND1-213ENST00000526357 PLCD4Q9BRC7 762 aa11.32□□□□□ -0.6
CTNND1-213ENST00000526357 PANK3Q9H999 370 aa11.32□□□□□ -0.6
CTNND1-213ENST00000526357 CDK5RAP3Q96JB5 506 aa11.32□□□□□ -0.6
CTNND1-213ENST00000526357 DZIP1LQ8IYY4 767 aaKnown RBP11.32□□□□□ -0.6
CTNND1-213ENST00000526357 KIF7Q2M1P5 1343 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 SKIDA1Q1XH10 827 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 GOLGA6L7A0A1B0GV03 622 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 SEPT7Q16181 437 aaKnown RBP11.31□□□□□ -0.6
CTNND1-213ENST00000526357 WASHC2AQ641Q2 1341 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
CTNND1-213ENST00000526357 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 SDF4Q9BRK5 362 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 DHX8Q14562 1220 aaKnown RBP11.31□□□□□ -0.6
CTNND1-213ENST00000526357 EXOC6Q8TAG9 804 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 GOLGA6L10A6NI86 522 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 TTLL5Q6EMB2 1281 aa11.31□□□□□ -0.6
CTNND1-213ENST00000526357 TXLNAP40222 546 aa11.3□□□□□ -0.6
CTNND1-213ENST00000526357 TXLNBQ8N3L3 684 aa11.3□□□□□ -0.6
CTNND1-213ENST00000526357 FKBP5Q13451 457 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-213ENST00000526357 CCAR1Q8IX12 1150 aaKnown RBP11.3□□□□□ -0.6
CTNND1-213ENST00000526357 FYB1O15117 783 aa11.3□□□□□ -0.6
CTNND1-213ENST00000526357 PLIN1O60240 522 aa11.3□□□□□ -0.6
CTNND1-213ENST00000526357 DIAPH1O60610 1272 aaKnown RBP11.3□□□□□ -0.6
CTNND1-213ENST00000526357 IKQ13123 557 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-213ENST00000526357 AXDND1Q5T1B0 1012 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-213ENST00000526357 SYTL4Q96C24 671 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-213ENST00000526357 L3MBTL2Q969R5 705 aa11.29□□□□□ -0.6
CTNND1-213ENST00000526357 SMC2O95347 1197 aa11.29□□□□□ -0.6
CTNND1-213ENST00000526357 SLC3A2P08195 630 aaKnown RBP11.29□□□□□ -0.6
CTNND1-213ENST00000526357 ANKRD62A6NC57 917 aa11.29□□□□□ -0.6
CTNND1-213ENST00000526357 RABEP1Q15276 862 aa11.29□□□□□ -0.6
CTNND1-213ENST00000526357 VPS8Q8N3P4 1428 aa11.29□□□□□ -0.6
CTNND1-213ENST00000526357 NEUROD6Q96NK8 337 aa11.29□□□□□ -0.6
CTNND1-213ENST00000526357 MRE11P49959 708 aa11.28□□□□□ -0.6
CTNND1-213ENST00000526357 LUC7LQ9NQ29 371 aaKnown RBP11.28□□□□□ -0.6
CTNND1-213ENST00000526357 EZRP15311 586 aaKnown RBP11.28□□□□□ -0.6
CTNND1-213ENST00000526357 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
CTNND1-213ENST00000526357 ZNHIT6Q9NWK9 470 aaKnown RBP11.28□□□□□ -0.6
CTNND1-213ENST00000526357 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
CTNND1-213ENST00000526357 KIAA0754O94854 1291 aa11.28□□□□□ -0.6
CTNND1-213ENST00000526357 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
CTNND1-213ENST00000526357 AAMPQ13685 434 aa11.28□□□□□ -0.6
CTNND1-213ENST00000526357 KRT18P05783 430 aaKnown RBP11.28□□□□□ -0.6
CTNND1-213ENST00000526357 NASPP49321 788 aaPredicted RBP11.28□□□□□ -0.6
CTNND1-213ENST00000526357 CNTROBQ8N137 903 aa11.28□□□□□ -0.6
CTNND1-213ENST00000526357 TRIM5Q9C035 493 aa11.28□□□□□ -0.6
CTNND1-213ENST00000526357 RIC3Q7Z5B4 369 aa11.27□□□□□ -0.6
CTNND1-213ENST00000526357 ZNF396Q96N95 335 aaPredicted RBP11.27□□□□□ -0.6
CTNND1-213ENST00000526357 CDC45O75419 566 aa11.27□□□□□ -0.61
CTNND1-213ENST00000526357 HNRNPMP52272 730 aaKnown RBP eCLIP11.27□□□□□ -0.615e-7■■■■□ 21
CTNND1-213ENST00000526357 RIPK4P57078 832 aa11.27□□□□□ -0.61
CTNND1-213ENST00000526357 HSP90AB3PQ58FF7 597 aa11.27□□□□□ -0.61
CTNND1-213ENST00000526357 TBC1D2BQ9UPU7 963 aa11.27□□□□□ -0.61
CTNND1-213ENST00000526357 DCAF8L1A6NGE4 600 aa11.27□□□□□ -0.61
CTNND1-213ENST00000526357 KINO60870 393 aaKnown RBP11.26□□□□□ -0.61
CTNND1-213ENST00000526357 C22orf23Q9BZE7 217 aa11.26□□□□□ -0.61
CTNND1-213ENST00000526357 CCDC144AA2RUR9 1427 aa11.26□□□□□ -0.61
CTNND1-213ENST00000526357 ENOX2Q16206 610 aaKnown RBP11.26□□□□□ -0.61
CTNND1-213ENST00000526357 GNAI1P63096 354 aa11.26□□□□□ -0.61
CTNND1-213ENST00000526357 TSPY26PQ9H489 355 aa11.26□□□□□ -0.61
CTNND1-213ENST00000526357 INCENPQ9NQS7 918 aa11.26□□□□□ -0.61
CTNND1-213ENST00000526357 ZBED9Q6R2W3 1325 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 DACH1Q9UI36 760 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 TSPYL4Q9UJ04 414 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 PDCL3Q9H2J4 239 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 FANCIQ9NVI1 1328 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 HIP1O00291 1037 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 PSME1Q06323 249 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 CCDC181Q5TID7 509 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-213ENST00000526357 MBD3O95983 291 aa11.25□□□□□ -0.61
CTNND1-213ENST00000526357 MTMR7Q9Y216 660 aa11.24□□□□□ -0.61
CTNND1-213ENST00000526357 HMGN5P82970 282 aaKnown RBP11.24□□□□□ -0.61
CTNND1-213ENST00000526357 CCDC18Q5T9S5 1454 aa11.24□□□□□ -0.61
CTNND1-213ENST00000526357 GBP2P32456 591 aaPredicted RBP11.24□□□□□ -0.61
CTNND1-213ENST00000526357 FSD1Q9BTV5 496 aa11.24□□□□□ -0.61
CTNND1-213ENST00000526357 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
CTNND1-213ENST00000526357 UBTFL1P0CB47 393 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-213ENST00000526357 DESP17661 470 aa11.23□□□□□ -0.61
CTNND1-213ENST00000526357 BRPF1P55201 1214 aaPredicted RBP11.23□□□□□ -0.61
CTNND1-213ENST00000526357 STIM1Q13586 685 aa11.23□□□□□ -0.61
CTNND1-213ENST00000526357 APAF1O14727 1248 aa11.23□□□□□ -0.61
CTNND1-213ENST00000526357 ERLIN1O75477 346 aa11.23□□□□□ -0.61
CTNND1-213ENST00000526357 PDCP20941 246 aa11.23□□□□□ -0.61
CTNND1-213ENST00000526357 ST20-MTHFSA0A0A6YYL1 179 aa11.23□□□□□ -0.61
CTNND1-213ENST00000526357 PPFIBP1Q86W92 1011 aa11.23□□□□□ -0.61
CTNND1-213ENST00000526357 EIF3JO75822 258 aaKnown RBP11.22□□□□□ -0.61
CTNND1-213ENST00000526357 MCM2P49736 904 aa11.22□□□□□ -0.61
CTNND1-213ENST00000526357 IQCEQ6IPM2 695 aa11.22□□□□□ -0.61
CTNND1-213ENST00000526357 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
CTNND1-213ENST00000526357 DEF6Q9H4E7 631 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms