RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 FYB1O15117 783 aa16.41■□□□□ 0.22
LRRK1-202ENST00000525284 CCDC27Q2M243 656 aa16.41■□□□□ 0.22
LRRK1-202ENST00000525284 FILIP1LQ4L180 1135 aa16.41■□□□□ 0.22
LRRK1-202ENST00000525284 FOXD1Q16676 465 aa16.41■□□□□ 0.22
LRRK1-202ENST00000525284 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
LRRK1-202ENST00000525284 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.4■□□□□ 0.22
LRRK1-202ENST00000525284 BCCIPQ9P287 314 aaKnown RBP eCLIP16.4■□□□□ 0.22
LRRK1-202ENST00000525284 BRMS1Q9HCU9 246 aa16.4■□□□□ 0.22
LRRK1-202ENST00000525284 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
LRRK1-202ENST00000525284 FAM177A1Q8N128 213 aaPredicted RBP16.39■□□□□ 0.21
LRRK1-202ENST00000525284 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
LRRK1-202ENST00000525284 EIF2S2P20042 333 aaKnown RBP16.39■□□□□ 0.21
LRRK1-202ENST00000525284 CAVIN1Q6NZI2 390 aaKnown RBP16.39■□□□□ 0.21
LRRK1-202ENST00000525284 GGT6Q6P531 493 aa16.38■□□□□ 0.21
LRRK1-202ENST00000525284 HMGN5P82970 282 aaKnown RBP16.38■□□□□ 0.21
LRRK1-202ENST00000525284 NFKBIBQ15653 356 aa16.38■□□□□ 0.21
LRRK1-202ENST00000525284 ATP2B1P20020 1258 aa16.38■□□□□ 0.21
LRRK1-202ENST00000525284 NECTIN2Q92692 538 aa16.38■□□□□ 0.21
LRRK1-202ENST00000525284 EIF3JO75822 258 aaKnown RBP16.38■□□□□ 0.21
LRRK1-202ENST00000525284 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
LRRK1-202ENST00000525284 BRPF3Q9ULD4 1205 aa16.37■□□□□ 0.21
LRRK1-202ENST00000525284 WWC2Q6AWC2 1192 aa16.37■□□□□ 0.21
LRRK1-202ENST00000525284 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
LRRK1-202ENST00000525284 RSPH4AQ5TD94 716 aa16.37■□□□□ 0.21
LRRK1-202ENST00000525284 TSPY26PQ9H489 355 aa16.37■□□□□ 0.21
LRRK1-202ENST00000525284 GBP2P32456 591 aaPredicted RBP16.37■□□□□ 0.21
LRRK1-202ENST00000525284 MPNDQ8N594 471 aa16.37■□□□□ 0.21
LRRK1-202ENST00000525284 EIF3AQ14152 1382 aaKnown RBP16.37■□□□□ 0.21
LRRK1-202ENST00000525284 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
LRRK1-202ENST00000525284 CCDC102AQ96A19 550 aa16.36■□□□□ 0.21
LRRK1-202ENST00000525284 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
LRRK1-202ENST00000525284 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
LRRK1-202ENST00000525284 WIZO95785 1651 aa16.36■□□□□ 0.21
LRRK1-202ENST00000525284 RABEP1Q15276 862 aa16.36■□□□□ 0.21
LRRK1-202ENST00000525284 RALYLQ86SE5 291 aaKnown RBP16.36■□□□□ 0.21
LRRK1-202ENST00000525284 BAZ1AQ9NRL2 1556 aaPredicted RBP16.36■□□□□ 0.21
LRRK1-202ENST00000525284 ERLIN1O75477 346 aa16.36■□□□□ 0.21
LRRK1-202ENST00000525284 GPATCH11Q8N954 259 aa16.36■□□□□ 0.21
LRRK1-202ENST00000525284 LRRCC1Q9C099 1032 aa16.35■□□□□ 0.21
LRRK1-202ENST00000525284 ZNHIT6Q9NWK9 470 aaKnown RBP16.35■□□□□ 0.21
LRRK1-202ENST00000525284 CEP63Q96MT8 703 aa16.35■□□□□ 0.21
LRRK1-202ENST00000525284 NUTM2FA1L443 756 aa16.35■□□□□ 0.21
LRRK1-202ENST00000525284 INTS3Q68E01 1043 aaKnown RBP16.35■□□□□ 0.21
LRRK1-202ENST00000525284 CDK5RAP3Q96JB5 506 aa16.35■□□□□ 0.21
LRRK1-202ENST00000525284 IKQ13123 557 aaPredicted RBP16.35■□□□□ 0.21
LRRK1-202ENST00000525284 UQCRHLA0A096LP55 91 aa16.34■□□□□ 0.21
LRRK1-202ENST00000525284 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
LRRK1-202ENST00000525284 UQCRHP07919 91 aa16.34■□□□□ 0.21
LRRK1-202ENST00000525284 PKD2Q13563 968 aa16.34■□□□□ 0.21
LRRK1-202ENST00000525284 LETM1O95202 739 aaPredicted RBP16.34■□□□□ 0.21
LRRK1-202ENST00000525284 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
LRRK1-202ENST00000525284 XBP1P17861 261 aa16.34■□□□□ 0.21
LRRK1-202ENST00000525284 C1orf141Q5JVX7 400 aa16.34■□□□□ 0.21
LRRK1-202ENST00000525284 IPO4Q8TEX9 1081 aaKnown RBP16.34■□□□□ 0.21
LRRK1-202ENST00000525284 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
LRRK1-202ENST00000525284 SERPINC1P01008 464 aa16.33■□□□□ 0.21
LRRK1-202ENST00000525284 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.21
LRRK1-202ENST00000525284 PPM1FP49593 454 aaPredicted RBP16.33■□□□□ 0.21
LRRK1-202ENST00000525284 G3BP1Q13283 466 aaKnown RBP eCLIP16.33■□□□□ 0.21
LRRK1-202ENST00000525284 CCNB3Q8WWL7 1395 aa16.33■□□□□ 0.2
LRRK1-202ENST00000525284 WASHC4Q2M389 1173 aa16.33■□□□□ 0.2
LRRK1-202ENST00000525284 TRAK2O60296 914 aa16.32■□□□□ 0.2
LRRK1-202ENST00000525284 RRP1P56182 461 aaKnown RBP16.32■□□□□ 0.2
LRRK1-202ENST00000525284 MAP2K1Q02750 393 aaPredicted RBP16.32■□□□□ 0.2
LRRK1-202ENST00000525284 CEBPZQ03701 1054 aaKnown RBP16.32■□□□□ 0.2
LRRK1-202ENST00000525284 C22orf23Q9BZE7 217 aa16.32■□□□□ 0.2
LRRK1-202ENST00000525284 CFAP45Q9UL16 551 aa16.32■□□□□ 0.2
LRRK1-202ENST00000525284 FANCIQ9NVI1 1328 aa16.31■□□□□ 0.2
LRRK1-202ENST00000525284 NLRP13Q86W25 1043 aa16.31■□□□□ 0.2
LRRK1-202ENST00000525284 IL27Q8NEV9 243 aa16.31■□□□□ 0.2
LRRK1-202ENST00000525284 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
LRRK1-202ENST00000525284 PRPF40AO75400 957 aaKnown RBP16.3■□□□□ 0.2
LRRK1-202ENST00000525284 TANGO6Q9C0B7 1094 aa16.3■□□□□ 0.2
LRRK1-202ENST00000525284 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.3■□□□□ 0.2
LRRK1-202ENST00000525284 NUTM2DQ5VT03 806 aaPredicted RBP16.3■□□□□ 0.2
LRRK1-202ENST00000525284 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
LRRK1-202ENST00000525284 SEPT11Q9NVA2 429 aaKnown RBP16.3■□□□□ 0.2
LRRK1-202ENST00000525284 KIF27Q86VH2 1401 aa16.3■□□□□ 0.2
LRRK1-202ENST00000525284 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
LRRK1-202ENST00000525284 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
LRRK1-202ENST00000525284 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
LRRK1-202ENST00000525284 TEFQ10587 303 aa16.28■□□□□ 0.2
LRRK1-202ENST00000525284 WDR70Q9NW82 654 aa16.28■□□□□ 0.2
LRRK1-202ENST00000525284 DNAJC2Q99543 621 aaKnown RBP16.28■□□□□ 0.2
LRRK1-202ENST00000525284 NEBLO76041 1014 aa16.28■□□□□ 0.2
LRRK1-202ENST00000525284 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
LRRK1-202ENST00000525284 CCDC91Q7Z6B0 441 aa16.28■□□□□ 0.2
LRRK1-202ENST00000525284 LUC7LQ9NQ29 371 aaKnown RBP16.28■□□□□ 0.2
LRRK1-202ENST00000525284 TRERF1Q96PN7 1200 aa16.27■□□□□ 0.2
LRRK1-202ENST00000525284 DDX19BQ9UMR2 479 aa16.27■□□□□ 0.2
LRRK1-202ENST00000525284 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.2
LRRK1-202ENST00000525284 TXLNAP40222 546 aa16.27■□□□□ 0.2
LRRK1-202ENST00000525284 CCDC113Q9H0I3 377 aa16.27■□□□□ 0.2
LRRK1-202ENST00000525284 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.19
LRRK1-202ENST00000525284 LNPKQ9C0E8 428 aa16.27■□□□□ 0.19
LRRK1-202ENST00000525284 TNNT1P13805 278 aa16.26■□□□□ 0.19
LRRK1-202ENST00000525284 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
LRRK1-202ENST00000525284 E9PSI1 815 aa16.26■□□□□ 0.19
LRRK1-202ENST00000525284 SHTN1A0MZ66 631 aa16.26■□□□□ 0.19
LRRK1-202ENST00000525284 FIBPO43427 364 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms