RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.15□□□□□ -1.1
NPM1-211ENST00000523622 DDX46Q7L014 1031 aaKnown RBP8.15□□□□□ -1.1
NPM1-211ENST00000523622 CCAR1Q8IX12 1150 aaKnown RBP8.15□□□□□ -1.1
NPM1-211ENST00000523622 SCYL1Q96KG9 808 aa8.15□□□□□ -1.1
NPM1-211ENST00000523622 TMX4Q9H1E5 349 aaPredicted RBP8.15□□□□□ -1.1
NPM1-211ENST00000523622 SWAP70Q9UH65 585 aa8.15□□□□□ -1.1
NPM1-211ENST00000523622 NRBP1Q9UHY1 535 aa8.15□□□□□ -1.1
NPM1-211ENST00000523622 DMRT2Q9Y5R5 561 aa8.15□□□□□ -1.1
NPM1-211ENST00000523622 EGFL6Q8IUX8 553 aa8.14□□□□□ -1.11
NPM1-211ENST00000523622 PARP9Q8IXQ6 854 aa8.14□□□□□ -1.11
NPM1-211ENST00000523622 BSDC1Q9NW68 430 aaPredicted RBP8.14□□□□□ -1.11
NPM1-211ENST00000523622 TPX2Q9ULW0 747 aaKnown RBP8.14□□□□□ -1.11
NPM1-211ENST00000523622 IGF1RP08069 1367 aa8.13□□□□□ -1.11
NPM1-211ENST00000523622 APPP05067 770 aa8.13□□□□□ -1.11
NPM1-211ENST00000523622 IBSPP21815 317 aaPredicted RBP8.13□□□□□ -1.11
NPM1-211ENST00000523622 VAMP1P23763 118 aa8.13□□□□□ -1.11
NPM1-211ENST00000523622 SEMA3FQ13275 785 aa8.13□□□□□ -1.11
NPM1-211ENST00000523622 NOP58Q9Y2X3 529 aaKnown RBP8.13□□□□□ -1.11
NPM1-211ENST00000523622 KAT6BQ8WYB5 2073 aa8.13□□□□□ -1.11
NPM1-211ENST00000523622 PSEN1P49768 467 aa8.12□□□□□ -1.11
NPM1-211ENST00000523622 IRX3P78415 501 aaPredicted RBP8.12□□□□□ -1.11
NPM1-211ENST00000523622 BIRC2Q13490 618 aa8.12□□□□□ -1.11
NPM1-211ENST00000523622 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
NPM1-211ENST00000523622 MIER1Q8N108 512 aa8.12□□□□□ -1.11
NPM1-211ENST00000523622 STAG3Q9UJ98 1225 aa8.12□□□□□ -1.11
NPM1-211ENST00000523622 TBX22Q9Y458 520 aa8.12□□□□□ -1.11
NPM1-211ENST00000523622 CCDC189A1A4V9 331 aa8.11□□□□□ -1.11
NPM1-211ENST00000523622 HOXA2O43364 376 aa8.11□□□□□ -1.11
NPM1-211ENST00000523622 SRPK2P78362 688 aaKnown RBP8.11□□□□□ -1.11
NPM1-211ENST00000523622 NPAS4Q8IUM7 802 aa8.11□□□□□ -1.11
NPM1-211ENST00000523622 RPS6KC1Q96S38 1066 aa8.11□□□□□ -1.11
NPM1-211ENST00000523622 IRF2BPLQ9H1B7 796 aa8.11□□□□□ -1.11
NPM1-211ENST00000523622 CUEDC1Q9NWM3 386 aaPredicted RBP8.11□□□□□ -1.11
NPM1-211ENST00000523622 RRP9O43818 475 aaKnown RBP8.1□□□□□ -1.11
NPM1-211ENST00000523622 RFX1P22670 979 aa8.1□□□□□ -1.11
NPM1-211ENST00000523622 EVA1CP58658 441 aa8.1□□□□□ -1.11
NPM1-211ENST00000523622 ICE2Q659A1 982 aa8.1□□□□□ -1.11
NPM1-211ENST00000523622 CARD10Q9BWT7 1032 aa8.1□□□□□ -1.11
NPM1-211ENST00000523622 BRINP2Q9C0B6 783 aa8.1□□□□□ -1.11
NPM1-211ENST00000523622 QTRT2Q9H974 415 aaKnown RBP8.1□□□□□ -1.11
NPM1-211ENST00000523622 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
NPM1-211ENST00000523622 RECKO95980 971 aa8.09□□□□□ -1.11
NPM1-211ENST00000523622 LMOD3Q0VAK6 560 aa8.09□□□□□ -1.11
NPM1-211ENST00000523622 PLEKHG6Q3KR16 790 aa8.09□□□□□ -1.11
NPM1-211ENST00000523622 CCDC184Q52MB2 194 aa8.09□□□□□ -1.11
NPM1-211ENST00000523622 NLGN1Q8N2Q7 840 aa8.09□□□□□ -1.11
NPM1-211ENST00000523622 ATL2Q8NHH9 583 aa8.09□□□□□ -1.11
NPM1-211ENST00000523622 GLMNQ92990 594 aa8.09□□□□□ -1.11
NPM1-211ENST00000523622 MAP3K20Q9NYL2 800 aaKnown RBP8.09□□□□□ -1.11
NPM1-211ENST00000523622 PRR12Q9ULL5 1215 aa8.09□□□□□ -1.11
NPM1-211ENST00000523622 TBX4P57082 545 aa8.08□□□□□ -1.12
NPM1-211ENST00000523622 XPCQ01831 940 aaPredicted RBP8.08□□□□□ -1.12
NPM1-211ENST00000523622 POU5F1Q01860 360 aaKnown RBP8.08□□□□□ -1.12
NPM1-211ENST00000523622 AMHR2Q16671 573 aa8.08□□□□□ -1.12
NPM1-211ENST00000523622 CCDC144BQ3MJ40 725 aa8.08□□□□□ -1.12
NPM1-211ENST00000523622 ZCRB1Q8TBF4 217 aaKnown RBP8.08□□□□□ -1.12
NPM1-211ENST00000523622 SNRNP27Q8WVK2 155 aaKnown RBP8.08□□□□□ -1.12
NPM1-211ENST00000523622 G3BP2Q9UN86 482 aaKnown RBP8.08□□□□□ -1.12
NPM1-211ENST00000523622 SPDYE2BA6NHP3 402 aa8.07□□□□□ -1.12
NPM1-211ENST00000523622 SPDYE5A6NIY4 337 aa8.07□□□□□ -1.12
NPM1-211ENST00000523622 SPDYE6P0CI01 402 aa8.07□□□□□ -1.12
NPM1-211ENST00000523622 ERCC5P28715 1186 aaPredicted RBP8.07□□□□□ -1.12
NPM1-211ENST00000523622 TCEAL1Q15170 157 aa8.07□□□□□ -1.12
NPM1-211ENST00000523622 SPDYE2Q495Y8 402 aa8.07□□□□□ -1.12
NPM1-211ENST00000523622 PCGF5Q86SE9 256 aa8.07□□□□□ -1.12
NPM1-211ENST00000523622 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
NPM1-211ENST00000523622 POM121CA8CG34 1229 aa8.06□□□□□ -1.12
NPM1-211ENST00000523622 HSP90AA1P07900 732 aaKnown RBP8.06□□□□□ -1.12
NPM1-211ENST00000523622 HOXD11P31277 338 aaPredicted RBP8.06□□□□□ -1.12
NPM1-211ENST00000523622 CC2D1BQ5T0F9 858 aaKnown RBP8.06□□□□□ -1.12
NPM1-211ENST00000523622 C1orf131Q8NDD1 294 aaKnown RBP8.06□□□□□ -1.12
NPM1-211ENST00000523622 ZNF830Q96NB3 372 aaPredicted RBP8.06□□□□□ -1.12
NPM1-211ENST00000523622 INO80BQ9C086 356 aaPredicted RBP8.06□□□□□ -1.12
NPM1-211ENST00000523622 TANGO6Q9C0B7 1094 aa8.06□□□□□ -1.12
NPM1-211ENST00000523622 PIF1Q9H611 641 aa8.06□□□□□ -1.12
NPM1-211ENST00000523622 SPC25Q9HBM1 224 aa8.06□□□□□ -1.12
NPM1-211ENST00000523622 PDZRN3Q9UPQ7 1066 aa8.06□□□□□ -1.12
NPM1-211ENST00000523622 TCERG1O14776 1098 aaKnown RBP8.05□□□□□ -1.12
NPM1-211ENST00000523622 IRF6O14896 467 aa8.05□□□□□ -1.12
NPM1-211ENST00000523622 MTA1Q13330 715 aa8.05□□□□□ -1.12
NPM1-211ENST00000523622 HSP90AB3PQ58FF7 597 aa8.05□□□□□ -1.12
NPM1-211ENST00000523622 ANKRD23Q86SG2 305 aa8.05□□□□□ -1.12
NPM1-211ENST00000523622 PAGR1Q9BTK6 254 aa8.05□□□□□ -1.12
NPM1-211ENST00000523622 TRIM34Q9BYJ4 488 aa8.05□□□□□ -1.12
NPM1-211ENST00000523622 FAM200BP0CF97 657 aa8.04□□□□□ -1.12
NPM1-211ENST00000523622 MARSP56192 900 aaKnown RBP8.04□□□□□ -1.12
NPM1-211ENST00000523622 PDILTQ8N807 584 aa8.04□□□□□ -1.12
NPM1-211ENST00000523622 DHX38Q92620 1227 aaKnown RBP8.04□□□□□ -1.12
NPM1-211ENST00000523622 COL4A3BPQ9Y5P4 624 aa8.04□□□□□ -1.12
NPM1-211ENST00000523622 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.03□□□□□ -1.12
NPM1-211ENST00000523622 VDRP11473 427 aa8.03□□□□□ -1.12
NPM1-211ENST00000523622 MLLT3P42568 568 aaPredicted RBP8.03□□□□□ -1.12
NPM1-211ENST00000523622 HSP90AA2PQ14568 343 aaPredicted RBP8.03□□□□□ -1.12
NPM1-211ENST00000523622 SH3D19Q5HYK7 790 aa8.03□□□□□ -1.12
NPM1-211ENST00000523622 CFAP70Q5T0N1 1121 aa8.03□□□□□ -1.12
NPM1-211ENST00000523622 MPNDQ8N594 471 aa8.03□□□□□ -1.12
NPM1-211ENST00000523622 NBPF6Q5VWK0 638 aa8.02□□□□□ -1.13
NPM1-211ENST00000523622 NBPF5PQ86XG9 351 aaPredicted RBP8.02□□□□□ -1.13
NPM1-211ENST00000523622 NT5DC4Q86YG4 428 aa8.02□□□□□ -1.13
NPM1-211ENST00000523622 FMNL3Q8IVF7 1028 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms