RNA–Protein interactions for RNA: ENST00000523208.5

CD74-209, Transcript of CD74 molecule, humanhuman

TSL 5

Gene CD74, Length 767 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-209ENST00000523208 USP47Q96K76 1375 aa16.46■□□□□ 0.23
CD74-209ENST00000523208 ROBO1Q9Y6N7 1651 aa16.44■□□□□ 0.22
CD74-209ENST00000523208 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
CD74-209ENST00000523208 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
CD74-209ENST00000523208 PROSER2Q86WR7 435 aaPredicted RBP16.44■□□□□ 0.22
CD74-209ENST00000523208 MYOM1P52179 1685 aa16.43■□□□□ 0.22
CD74-209ENST00000523208 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
CD74-209ENST00000523208 MSH6P52701 1360 aa16.43■□□□□ 0.22
CD74-209ENST00000523208 PRAM1Q96QH2 718 aa16.42■□□□□ 0.22
CD74-209ENST00000523208 DCCP43146 1447 aa16.42■□□□□ 0.22
CD74-209ENST00000523208 WAPLQ7Z5K2 1190 aa16.4■□□□□ 0.22
CD74-209ENST00000523208 POGKQ9P215 609 aa16.4■□□□□ 0.22
CD74-209ENST00000523208 NHSL1Q5SYE7 1610 aa16.4■□□□□ 0.22
CD74-209ENST00000523208 CENPJQ9HC77 1338 aaPredicted RBP16.4■□□□□ 0.22
CD74-209ENST00000523208 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.21
CD74-209ENST00000523208 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
CD74-209ENST00000523208 NCOA3Q9Y6Q9 1424 aa16.38■□□□□ 0.21
CD74-209ENST00000523208 ATP7BP35670 1465 aa16.37■□□□□ 0.21
CD74-209ENST00000523208 PHLPP1O60346 1717 aa16.36■□□□□ 0.21
CD74-209ENST00000523208 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
CD74-209ENST00000523208 MST1RQ04912 1400 aa16.36■□□□□ 0.21
CD74-209ENST00000523208 ZEB1P37275 1124 aaPredicted RBP16.35■□□□□ 0.21
CD74-209ENST00000523208 CERKQ8TCT0 537 aa16.35■□□□□ 0.21
CD74-209ENST00000523208 MON2Q7Z3U7 1717 aa16.35■□□□□ 0.21
CD74-209ENST00000523208 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
CD74-209ENST00000523208 NRKQ7Z2Y5 1582 aa16.32■□□□□ 0.2
CD74-209ENST00000523208 ANKARQ7Z5J8 1434 aa16.31■□□□□ 0.2
CD74-209ENST00000523208 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
CD74-209ENST00000523208 DISP3Q9P2K9 1392 aa16.3■□□□□ 0.2
CD74-209ENST00000523208 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
CD74-209ENST00000523208 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
CD74-209ENST00000523208 KIF20BQ96Q89 1820 aa16.3■□□□□ 0.2
CD74-209ENST00000523208 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
CD74-209ENST00000523208 TRPM3Q9HCF6 1732 aaPredicted RBP16.29■□□□□ 0.2
CD74-209ENST00000523208 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
CD74-209ENST00000523208 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
CD74-209ENST00000523208 ATF3P18847 181 aa16.29■□□□□ 0.2
CD74-209ENST00000523208 EIF4G2P78344 907 aaKnown RBP eCLIP16.29■□□□□ 0.2
CD74-209ENST00000523208 COL16A1Q07092 1604 aaPredicted RBP16.29■□□□□ 0.2
CD74-209ENST00000523208 AHDC1Q5TGY3 1603 aaPredicted RBP16.29■□□□□ 0.2
CD74-209ENST00000523208 ABCA3Q99758 1704 aa16.28■□□□□ 0.2
CD74-209ENST00000523208 UBAP1LF5GYI3 381 aa16.27■□□□□ 0.2
CD74-209ENST00000523208 C19orf44Q9H6X5 657 aa16.27■□□□□ 0.2
CD74-209ENST00000523208 CADPS2Q86UW7 1296 aa16.26■□□□□ 0.19
CD74-209ENST00000523208 SRPK2P78362 688 aaKnown RBP16.25■□□□□ 0.19
CD74-209ENST00000523208 EVC2Q86UK5 1308 aa16.24■□□□□ 0.19
CD74-209ENST00000523208 PRR36Q9H6K5 1346 aa16.24■□□□□ 0.19
CD74-209ENST00000523208 WASLO00401 505 aaPredicted RBP16.24■□□□□ 0.19
CD74-209ENST00000523208 PPIP5K1Q6PFW1 1433 aa16.24■□□□□ 0.19
CD74-209ENST00000523208 ALS2Q96Q42 1657 aa16.24■□□□□ 0.19
CD74-209ENST00000523208 PIP4K2BP78356 416 aa16.23■□□□□ 0.19
CD74-209ENST00000523208 TESK2Q96S53 571 aa16.23■□□□□ 0.19
CD74-209ENST00000523208 ANKRD26Q9UPS8 1709 aa16.22■□□□□ 0.19
CD74-209ENST00000523208 SHPRHQ149N8 1683 aa16.22■□□□□ 0.19
CD74-209ENST00000523208 ATAD2Q6PL18 1390 aa16.22■□□□□ 0.19
CD74-209ENST00000523208 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
CD74-209ENST00000523208 CRYBG1Q9Y4K1 1723 aa16.22■□□□□ 0.19
CD74-209ENST00000523208 PHRF1Q9P1Y6 1649 aaKnown RBP16.21■□□□□ 0.19
CD74-209ENST00000523208 TOM1O60784 492 aa16.21■□□□□ 0.19
CD74-209ENST00000523208 CDK19Q9BWU1 502 aa16.21■□□□□ 0.19
CD74-209ENST00000523208 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
CD74-209ENST00000523208 PIK3C2AO00443 1686 aa16.21■□□□□ 0.18
CD74-209ENST00000523208 POLR3GLQ9BT43 218 aa16.2■□□□□ 0.18
CD74-209ENST00000523208 TMF1P82094 1093 aa16.19■□□□□ 0.18
CD74-209ENST00000523208 PXDNQ92626 1479 aa16.18■□□□□ 0.18
CD74-209ENST00000523208 USP54Q70EL1 1684 aa16.18■□□□□ 0.18
CD74-209ENST00000523208 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
CD74-209ENST00000523208 BRINP3Q76B58 766 aa16.17■□□□□ 0.18
CD74-209ENST00000523208 ORAI2Q96SN7 254 aa16.17■□□□□ 0.18
CD74-209ENST00000523208 SLAIN2Q9P270 581 aa16.17■□□□□ 0.18
CD74-209ENST00000523208 NUDT16Q96DE0 195 aaKnown RBP16.16■□□□□ 0.18
CD74-209ENST00000523208 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
CD74-209ENST00000523208 COL22A1Q8NFW1 1626 aaPredicted RBP16.16■□□□□ 0.18
CD74-209ENST00000523208 PMFBP1Q8TBY8 1022 aa16.14■□□□□ 0.17
CD74-209ENST00000523208 PHF8Q9UPP1 1060 aa16.14■□□□□ 0.17
CD74-209ENST00000523208 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
CD74-209ENST00000523208 DDX17Q92841 729 aaKnown RBP16.13■□□□□ 0.17
CD74-209ENST00000523208 A0A1W2PP64 1363 aa16.13■□□□□ 0.17
CD74-209ENST00000523208 CCDC7Q96M83 1385 aa16.13■□□□□ 0.17
CD74-209ENST00000523208 NINLQ9Y2I6 1382 aa16.13■□□□□ 0.17
CD74-209ENST00000523208 USP6P35125 1406 aa16.12■□□□□ 0.17
CD74-209ENST00000523208 XPCQ01831 940 aaPredicted RBP16.12■□□□□ 0.17
CD74-209ENST00000523208 LTN1O94822 1766 aa16.12■□□□□ 0.17
CD74-209ENST00000523208 KIF7Q2M1P5 1343 aa16.12■□□□□ 0.17
CD74-209ENST00000523208 POLR3AO14802 1390 aaPredicted RBP16.12■□□□□ 0.17
CD74-209ENST00000523208 TNS3Q68CZ2 1445 aa16.11■□□□□ 0.17
CD74-209ENST00000523208 TMC1Q8TDI8 760 aa16.11■□□□□ 0.17
CD74-209ENST00000523208 FBXO41Q8TF61 875 aa16.11■□□□□ 0.17
CD74-209ENST00000523208 NPHP3Q7Z494 1330 aa16.11■□□□□ 0.17
CD74-209ENST00000523208 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
CD74-209ENST00000523208 CCDC61Q9Y6R9 512 aa16.1■□□□□ 0.17
CD74-209ENST00000523208 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
CD74-209ENST00000523208 ANKRD36BQ8N2N9 1353 aa16.09■□□□□ 0.17
CD74-209ENST00000523208 PLCH1Q4KWH8 1693 aa16.08■□□□□ 0.17
CD74-209ENST00000523208 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
CD74-209ENST00000523208 SLC24A1O60721 1099 aa16.08■□□□□ 0.16
CD74-209ENST00000523208 ACEP12821 1306 aa16.08■□□□□ 0.16
CD74-209ENST00000523208 CPSF1Q10570 1443 aaKnown RBP16.08■□□□□ 0.16
CD74-209ENST00000523208 FOXO3O43524 673 aa16.07■□□□□ 0.16
CD74-209ENST00000523208 CABP1Q9NZU7 370 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms