RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 RGPD8O14715 1765 aaPredicted RBP9.62□□□□□ -0.87
CDH12-208ENST00000522262 SIRT1Q96EB6 747 aa9.61□□□□□ -0.87
CDH12-208ENST00000522262 FMN2Q9NZ56 1722 aa9.61□□□□□ -0.87
CDH12-208ENST00000522262 MST1RQ04912 1400 aa9.61□□□□□ -0.87
CDH12-208ENST00000522262 TULP4Q9NRJ4 1543 aa9.61□□□□□ -0.87
CDH12-208ENST00000522262 HIRIP3Q9BW71 556 aaPredicted RBP9.61□□□□□ -0.87
CDH12-208ENST00000522262 DCCP43146 1447 aa9.6□□□□□ -0.87
CDH12-208ENST00000522262 ROBO1Q9Y6N7 1651 aa9.6□□□□□ -0.87
CDH12-208ENST00000522262 MSH6P52701 1360 aa9.6□□□□□ -0.87
CDH12-208ENST00000522262 CARD11Q9BXL7 1154 aa9.6□□□□□ -0.87
CDH12-208ENST00000522262 C19orf44Q9H6X5 657 aa9.6□□□□□ -0.87
CDH12-208ENST00000522262 MINK1Q8N4C8 1332 aaPredicted RBP9.59□□□□□ -0.87
CDH12-208ENST00000522262 UBAP1LF5GYI3 381 aa9.58□□□□□ -0.88
CDH12-208ENST00000522262 PRR36Q9H6K5 1346 aa9.58□□□□□ -0.88
CDH12-208ENST00000522262 C1orf167Q5SNV9 1468 aa9.58□□□□□ -0.88
CDH12-208ENST00000522262 NUTM2FA1L443 756 aa9.57□□□□□ -0.88
CDH12-208ENST00000522262 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
CDH12-208ENST00000522262 TESK2Q96S53 571 aa9.57□□□□□ -0.88
CDH12-208ENST00000522262 CENPJQ9HC77 1338 aaPredicted RBP9.57□□□□□ -0.88
CDH12-208ENST00000522262 USP47Q96K76 1375 aa9.57□□□□□ -0.88
CDH12-208ENST00000522262 POGKQ9P215 609 aa9.57□□□□□ -0.88
CDH12-208ENST00000522262 ATP7BP35670 1465 aa9.57□□□□□ -0.88
CDH12-208ENST00000522262 TOPAZ1Q8N9V7 1692 aa9.56□□□□□ -0.88
CDH12-208ENST00000522262 ST20-MTHFSA0A0A6YYL1 179 aa9.56□□□□□ -0.88
CDH12-208ENST00000522262 PIP4K2BP78356 416 aa9.56□□□□□ -0.88
CDH12-208ENST00000522262 ORAI2Q96SN7 254 aa9.56□□□□□ -0.88
CDH12-208ENST00000522262 SLAIN2Q9P270 581 aa9.56□□□□□ -0.88
CDH12-208ENST00000522262 FBXO41Q8TF61 875 aa9.56□□□□□ -0.88
CDH12-208ENST00000522262 DDX17Q92841 729 aaKnown RBP9.56□□□□□ -0.88
CDH12-208ENST00000522262 BRINP3Q76B58 766 aa9.55□□□□□ -0.88
CDH12-208ENST00000522262 NHSL1Q5SYE7 1610 aa9.55□□□□□ -0.88
CDH12-208ENST00000522262 ILDR1Q86SU0 546 aaPredicted RBP9.55□□□□□ -0.88
CDH12-208ENST00000522262 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
CDH12-208ENST00000522262 WASLO00401 505 aaPredicted RBP9.54□□□□□ -0.88
CDH12-208ENST00000522262 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
CDH12-208ENST00000522262 TOM1O60784 492 aa9.54□□□□□ -0.88
CDH12-208ENST00000522262 ATF3P18847 181 aa9.54□□□□□ -0.88
CDH12-208ENST00000522262 DISP3Q9P2K9 1392 aa9.54□□□□□ -0.88
CDH12-208ENST00000522262 COL16A1Q07092 1604 aaPredicted RBP9.53□□□□□ -0.88
CDH12-208ENST00000522262 CDK19Q9BWU1 502 aa9.53□□□□□ -0.88
CDH12-208ENST00000522262 EIF3AQ14152 1382 aaKnown RBP9.53□□□□□ -0.88
CDH12-208ENST00000522262 CABP2Q9NPB3 220 aa9.53□□□□□ -0.88
CDH12-208ENST00000522262 AHDC1Q5TGY3 1603 aaPredicted RBP9.52□□□□□ -0.88
CDH12-208ENST00000522262 HSPA5P11021 654 aaKnown RBP9.52□□□□□ -0.89
CDH12-208ENST00000522262 ANKARQ7Z5J8 1434 aa9.51□□□□□ -0.89
CDH12-208ENST00000522262 HSPA1LP34931 641 aa9.51□□□□□ -0.89
CDH12-208ENST00000522262 SCAF1Q9H7N4 1312 aaKnown RBP9.51□□□□□ -0.89
CDH12-208ENST00000522262 PXDNQ92626 1479 aa9.51□□□□□ -0.89
CDH12-208ENST00000522262 C11orf95C9JLR9 678 aaPredicted RBP9.51□□□□□ -0.89
CDH12-208ENST00000522262 PHLPP1O60346 1717 aa9.51□□□□□ -0.89
CDH12-208ENST00000522262 MYOM1P52179 1685 aa9.51□□□□□ -0.89
CDH12-208ENST00000522262 CD163L1Q9NR16 1453 aa9.5□□□□□ -0.89
CDH12-208ENST00000522262 ITSN1Q15811 1721 aa9.5□□□□□ -0.89
CDH12-208ENST00000522262 KIF1AQ12756 1690 aa9.5□□□□□ -0.89
CDH12-208ENST00000522262 ESCO1Q5FWF5 840 aa9.5□□□□□ -0.89
CDH12-208ENST00000522262 NUDT16Q96DE0 195 aaKnown RBP9.5□□□□□ -0.89
CDH12-208ENST00000522262 TRPM3Q9HCF6 1732 aaPredicted RBP9.5□□□□□ -0.89
CDH12-208ENST00000522262 PMFBP1Q8TBY8 1022 aa9.49□□□□□ -0.89
CDH12-208ENST00000522262 XPCQ01831 940 aaPredicted RBP9.48□□□□□ -0.89
CDH12-208ENST00000522262 PPIP5K1Q6PFW1 1433 aa9.48□□□□□ -0.89
CDH12-208ENST00000522262 FOXO3O43524 673 aa9.48□□□□□ -0.89
CDH12-208ENST00000522262 SRPK2P78362 688 aaKnown RBP9.47□□□□□ -0.89
CDH12-208ENST00000522262 SOS2Q07890 1332 aaPredicted RBP9.47□□□□□ -0.89
CDH12-208ENST00000522262 EVC2Q86UK5 1308 aa9.47□□□□□ -0.89
CDH12-208ENST00000522262 AKAP12Q02952 1782 aa9.47□□□□□ -0.89
CDH12-208ENST00000522262 NRKQ7Z2Y5 1582 aa9.47□□□□□ -0.89
CDH12-208ENST00000522262 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDH12-208ENST00000522262 PHF8Q9UPP1 1060 aa9.47□□□□□ -0.89
CDH12-208ENST00000522262 POLR3AO14802 1390 aaPredicted RBP9.47□□□□□ -0.89
CDH12-208ENST00000522262 CABP1Q9NZU7 370 aa9.46□□□□□ -0.89
CDH12-208ENST00000522262 ALS2Q96Q42 1657 aa9.46□□□□□ -0.9
CDH12-208ENST00000522262 MON2Q7Z3U7 1717 aa9.46□□□□□ -0.9
CDH12-208ENST00000522262 CCDC61Q9Y6R9 512 aa9.45□□□□□ -0.9
CDH12-208ENST00000522262 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
CDH12-208ENST00000522262 ACEP12821 1306 aa9.45□□□□□ -0.9
CDH12-208ENST00000522262 PLEKHG3A1L390 1219 aa9.45□□□□□ -0.9
CDH12-208ENST00000522262 MARF1Q9Y4F3 1742 aaKnown RBP9.45□□□□□ -0.9
CDH12-208ENST00000522262 CPSF1Q10570 1443 aaKnown RBP9.45□□□□□ -0.9
CDH12-208ENST00000522262 CRYBG1Q9Y4K1 1723 aa9.45□□□□□ -0.9
CDH12-208ENST00000522262 SLC12A5Q9H2X9 1139 aa9.45□□□□□ -0.9
CDH12-208ENST00000522262 SHPRHQ149N8 1683 aa9.45□□□□□ -0.9
CDH12-208ENST00000522262 LRP6O75581 1613 aa9.44□□□□□ -0.9
CDH12-208ENST00000522262 A0A1W2PP64 1363 aa9.43□□□□□ -0.9
CDH12-208ENST00000522262 ATAD2Q6PL18 1390 aa9.43□□□□□ -0.9
CDH12-208ENST00000522262 ABCA3Q99758 1704 aa9.43□□□□□ -0.9
CDH12-208ENST00000522262 PIK3C2AO00443 1686 aa9.43□□□□□ -0.9
CDH12-208ENST00000522262 COL22A1Q8NFW1 1626 aaPredicted RBP9.43□□□□□ -0.9
CDH12-208ENST00000522262 NPHP3Q7Z494 1330 aa9.43□□□□□ -0.9
CDH12-208ENST00000522262 TMF1P82094 1093 aa9.42□□□□□ -0.9
CDH12-208ENST00000522262 USP6P35125 1406 aa9.42□□□□□ -0.9
CDH12-208ENST00000522262 PNPLA6Q8IY17 1366 aa9.42□□□□□ -0.9
CDH12-208ENST00000522262 KIF7Q2M1P5 1343 aa9.42□□□□□ -0.9
CDH12-208ENST00000522262 WASHC2AQ641Q2 1341 aa9.42□□□□□ -0.9
CDH12-208ENST00000522262 MED1Q15648 1581 aaPredicted RBP9.42□□□□□ -0.9
CDH12-208ENST00000522262 KRT28Q7Z3Y7 464 aa9.42□□□□□ -0.9
CDH12-208ENST00000522262 SPATA31A3Q5VYP0 1347 aa9.41□□□□□ -0.9
CDH12-208ENST00000522262 TNS3Q68CZ2 1445 aa9.41□□□□□ -0.9
CDH12-208ENST00000522262 PUS7Q96PZ0 661 aaKnown RBP9.41□□□□□ -0.9
CDH12-208ENST00000522262 SBNO1A3KN83 1393 aa9.4□□□□□ -0.9
CDH12-208ENST00000522262 NGDNQ8NEJ9 315 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms