RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TRAK1Q9UPV9 953 aa29.85■■■□□ 2.37
TRIM35-203ENST00000521253 DLC1Q96QB1 1528 aa29.85■■■□□ 2.37
TRIM35-203ENST00000521253 PHLPP1O60346 1717 aa29.85■■■□□ 2.37
TRIM35-203ENST00000521253 AHDC1Q5TGY3 1603 aaPredicted RBP29.84■■■□□ 2.37
TRIM35-203ENST00000521253 SAFB2Q14151 953 aaKnown RBP eCLIP29.81■■■□□ 2.36
TRIM35-203ENST00000521253 COL16A1Q07092 1604 aaPredicted RBP29.81■■■□□ 2.36
TRIM35-203ENST00000521253 POGKQ9P215 609 aa29.8■■■□□ 2.36
TRIM35-203ENST00000521253 MED1Q15648 1581 aaPredicted RBP29.8■■■□□ 2.36
TRIM35-203ENST00000521253 ORAI2Q96SN7 254 aa29.79■■■□□ 2.36
TRIM35-203ENST00000521253 JCADQ9P266 1359 aa29.77■■■□□ 2.36
TRIM35-203ENST00000521253 NBPF1Q3BBV0 1214 aa29.76■■■□□ 2.35
TRIM35-203ENST00000521253 DDX17Q92841 729 aaKnown RBP29.76■■■□□ 2.35
TRIM35-203ENST00000521253 PCGF6Q9BYE7 350 aa29.76■■■□□ 2.35
TRIM35-203ENST00000521253 NUTM2FA1L443 756 aa29.75■■■□□ 2.35
TRIM35-203ENST00000521253 KIAA1210Q9ULL0 1709 aa29.74■■■□□ 2.35
TRIM35-203ENST00000521253 NHSL1Q5SYE7 1610 aa29.73■■■□□ 2.35
TRIM35-203ENST00000521253 ESCO1Q5FWF5 840 aa29.72■■■□□ 2.35
TRIM35-203ENST00000521253 FMN2Q9NZ56 1722 aa29.69■■■□□ 2.34
TRIM35-203ENST00000521253 HIRIP3Q9BW71 556 aaPredicted RBP29.68■■■□□ 2.34
TRIM35-203ENST00000521253 MINK1Q8N4C8 1332 aaPredicted RBP29.68■■■□□ 2.34
TRIM35-203ENST00000521253 TONSLQ96HA7 1378 aa29.65■■■□□ 2.34
TRIM35-203ENST00000521253 ARHGEF28Q8N1W1 1705 aaKnown RBP29.65■■■□□ 2.34
TRIM35-203ENST00000521253 ADGRB2O60241 1585 aa29.65■■■□□ 2.34
TRIM35-203ENST00000521253 LRRC59Q96AG4 307 aaKnown RBP29.65■■■□□ 2.34
TRIM35-203ENST00000521253 SOS2Q07890 1332 aaPredicted RBP29.64■■■□□ 2.34
TRIM35-203ENST00000521253 PHF23Q9BUL5 403 aaPredicted RBP29.63■■■□□ 2.33
TRIM35-203ENST00000521253 FOXO3O43524 673 aa29.62■■■□□ 2.33
TRIM35-203ENST00000521253 SPATA31A6Q5VVP1 1343 aa29.62■■■□□ 2.33
TRIM35-203ENST00000521253 NPHP3Q7Z494 1330 aa29.62■■■□□ 2.33
TRIM35-203ENST00000521253 NBPF8Q3BBV2 869 aa29.61■■■□□ 2.33
TRIM35-203ENST00000521253 SHPRHQ149N8 1683 aa29.6■■■□□ 2.33
TRIM35-203ENST00000521253 WASLO00401 505 aaPredicted RBP29.6■■■□□ 2.33
TRIM35-203ENST00000521253 ILDR2Q71H61 639 aa29.59■■■□□ 2.33
TRIM35-203ENST00000521253 TRPM1Q7Z4N2 1603 aa29.59■■■□□ 2.33
TRIM35-203ENST00000521253 ANKARQ7Z5J8 1434 aa29.58■■■□□ 2.33
TRIM35-203ENST00000521253 ROCK2O75116 1388 aaKnown RBP29.57■■■□□ 2.32
TRIM35-203ENST00000521253 PNPLA6Q8IY17 1366 aa29.57■■■□□ 2.32
TRIM35-203ENST00000521253 PHF8Q9UPP1 1060 aa29.57■■■□□ 2.32
TRIM35-203ENST00000521253 LRP6O75581 1613 aa29.56■■■□□ 2.32
TRIM35-203ENST00000521253 PXDNQ92626 1479 aa29.56■■■□□ 2.32
TRIM35-203ENST00000521253 XPCQ01831 940 aaPredicted RBP29.56■■■□□ 2.32
TRIM35-203ENST00000521253 EIF3AQ14152 1382 aaKnown RBP29.55■■■□□ 2.32
TRIM35-203ENST00000521253 PRR36Q9H6K5 1346 aa29.54■■■□□ 2.32
TRIM35-203ENST00000521253 USP32Q8NFA0 1604 aa29.54■■■□□ 2.32
TRIM35-203ENST00000521253 KIF1AQ12756 1690 aa29.53■■■□□ 2.32
TRIM35-203ENST00000521253 CENPJQ9HC77 1338 aaPredicted RBP29.53■■■□□ 2.32
TRIM35-203ENST00000521253 TULP4Q9NRJ4 1543 aa29.53■■■□□ 2.32
TRIM35-203ENST00000521253 RGS17Q9UGC6 210 aaPredicted RBP29.52■■■□□ 2.32
TRIM35-203ENST00000521253 RGPD8O14715 1765 aaPredicted RBP29.52■■■□□ 2.32
TRIM35-203ENST00000521253 NUTM2BA6NNL0 878 aaPredicted RBP29.51■■■□□ 2.31
TRIM35-203ENST00000521253 NUTM2EB1AL46 878 aaPredicted RBP29.51■■■□□ 2.31
TRIM35-203ENST00000521253 NUTM2AQ8IVF1 878 aaPredicted RBP29.51■■■□□ 2.31
TRIM35-203ENST00000521253 GPRASP1Q5JY77 1395 aa29.5■■■□□ 2.31
TRIM35-203ENST00000521253 PMFBP1Q8TBY8 1022 aa29.49■■■□□ 2.31
TRIM35-203ENST00000521253 CDK19Q9BWU1 502 aa29.49■■■□□ 2.31
TRIM35-203ENST00000521253 MEX3CQ5U5Q3 659 aaKnown RBP29.48■■■□□ 2.31
TRIM35-203ENST00000521253 KRT28Q7Z3Y7 464 aa29.48■■■□□ 2.31
TRIM35-203ENST00000521253 ATP7BP35670 1465 aa29.46■■■□□ 2.31
TRIM35-203ENST00000521253 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.31
TRIM35-203ENST00000521253 NUDT16Q96DE0 195 aaKnown RBP29.45■■■□□ 2.31
TRIM35-203ENST00000521253 RALGAPBQ86X10 1494 aa29.44■■■□□ 2.3
TRIM35-203ENST00000521253 PSME1Q06323 249 aa29.43■■■□□ 2.3
TRIM35-203ENST00000521253 SPATA31A3Q5VYP0 1347 aa29.43■■■□□ 2.3
TRIM35-203ENST00000521253 CARD11Q9BXL7 1154 aa29.42■■■□□ 2.3
TRIM35-203ENST00000521253 QRICH2Q9H0J4 1663 aa29.4■■■□□ 2.3
TRIM35-203ENST00000521253 COL22A1Q8NFW1 1626 aaPredicted RBP29.39■■■□□ 2.3
TRIM35-203ENST00000521253 SRPK2P78362 688 aaKnown RBP29.38■■■□□ 2.29
TRIM35-203ENST00000521253 SBNO1A3KN83 1393 aa29.38■■■□□ 2.29
TRIM35-203ENST00000521253 ADAMTS2O95450 1211 aa29.37■■■□□ 2.29
TRIM35-203ENST00000521253 POTEAQ6S8J7 498 aa29.37■■■□□ 2.29
TRIM35-203ENST00000521253 NGDNQ8NEJ9 315 aaKnown RBP29.37■■■□□ 2.29
TRIM35-203ENST00000521253 CCDC61Q9Y6R9 512 aa29.37■■■□□ 2.29
TRIM35-203ENST00000521253 TNS3Q68CZ2 1445 aa29.37■■■□□ 2.29
TRIM35-203ENST00000521253 CCER1Q8TC90 406 aaPredicted RBP29.36■■■□□ 2.29
TRIM35-203ENST00000521253 CABP2Q9NPB3 220 aa29.36■■■□□ 2.29
TRIM35-203ENST00000521253 C8orf37Q96NL8 207 aa29.34■■■□□ 2.29
TRIM35-203ENST00000521253 TIMELESSQ9UNS1 1208 aa29.33■■■□□ 2.29
TRIM35-203ENST00000521253 ITSN1Q15811 1721 aa29.33■■■□□ 2.29
TRIM35-203ENST00000521253 EVC2Q86UK5 1308 aa29.32■■■□□ 2.28
TRIM35-203ENST00000521253 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
TRIM35-203ENST00000521253 AFF2P51816 1311 aa29.31■■■□□ 2.28
TRIM35-203ENST00000521253 PLEKHG3A1L390 1219 aa29.31■■■□□ 2.28
TRIM35-203ENST00000521253 SOCS7O14512 581 aa29.31■■■□□ 2.28
TRIM35-203ENST00000521253 LMOD2Q6P5Q4 547 aa29.31■■■□□ 2.28
TRIM35-203ENST00000521253 ZNF772Q68DY9 489 aaPredicted RBP29.3■■■□□ 2.28
TRIM35-203ENST00000521253 ARHGEF10O15013 1369 aa29.29■■■□□ 2.28
TRIM35-203ENST00000521253 POLR3AO14802 1390 aaPredicted RBP29.28■■■□□ 2.28
TRIM35-203ENST00000521253 ACEP12821 1306 aa29.28■■■□□ 2.28
TRIM35-203ENST00000521253 TRPM3Q9HCF6 1732 aaPredicted RBP29.28■■■□□ 2.28
TRIM35-203ENST00000521253 PPIP5K1Q6PFW1 1433 aa29.28■■■□□ 2.28
TRIM35-203ENST00000521253 SBNO2Q9Y2G9 1366 aa29.27■■■□□ 2.28
TRIM35-203ENST00000521253 NGLY1Q96IV0 654 aa29.27■■■□□ 2.28
TRIM35-203ENST00000521253 CABLES1Q8TDN4 633 aa29.25■■■□□ 2.27
TRIM35-203ENST00000521253 PAK3O75914 559 aaPredicted RBP29.24■■■□□ 2.27
TRIM35-203ENST00000521253 PLEKHG5O94827 1062 aa29.24■■■□□ 2.27
TRIM35-203ENST00000521253 CABP1Q9NZU7 370 aa29.23■■■□□ 2.27
TRIM35-203ENST00000521253 ALS2Q96Q42 1657 aa29.21■■■□□ 2.27
TRIM35-203ENST00000521253 HAP1P54257 671 aaPredicted RBP29.2■■■□□ 2.26
TRIM35-203ENST00000521253 FNBP4Q8N3X1 1017 aaPredicted RBP29.19■■■□□ 2.26
TRIM35-203ENST00000521253 ST20-MTHFSA0A0A6YYL1 179 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms