RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ZBTB3Q9H5J0 574 aa10.7□□□□□ -0.7
SKP1-208ENST00000521216 HRCP23327 699 aa10.69□□□□□ -0.7
SKP1-208ENST00000521216 MTMR2Q13614 643 aa10.69□□□□□ -0.7
SKP1-208ENST00000521216 TUSC1Q2TAM9 212 aa10.69□□□□□ -0.7
SKP1-208ENST00000521216 LILRB3O75022 631 aa10.68□□□□□ -0.7
SKP1-208ENST00000521216 Q3C1V9 767 aa10.68□□□□□ -0.7
SKP1-208ENST00000521216 RTL5Q5HYW3 569 aaPredicted RBP10.68□□□□□ -0.7
SKP1-208ENST00000521216 FBXO31Q5XUX0 539 aaPredicted RBP10.68□□□□□ -0.7
SKP1-208ENST00000521216 TSC1Q92574 1164 aa10.68□□□□□ -0.7
SKP1-208ENST00000521216 HCSTQ9UBK5 93 aa10.68□□□□□ -0.7
SKP1-208ENST00000521216 RFC5P40937 340 aa10.67□□□□□ -0.7
SKP1-208ENST00000521216 PRPF38BQ5VTL8 546 aaKnown RBP10.67□□□□□ -0.7
SKP1-208ENST00000521216 RNF19BQ6ZMZ0 732 aa10.66□□□□□ -0.7
SKP1-208ENST00000521216 MTRQ99707 1265 aa10.65□□□□□ -0.7
SKP1-208ENST00000521216 FMNL1O95466 1100 aaPredicted RBP10.64□□□□□ -0.71
SKP1-208ENST00000521216 MMRN1Q13201 1228 aa10.64□□□□□ -0.71
SKP1-208ENST00000521216 PPP2R2DQ66LE6 453 aa10.64□□□□□ -0.71
SKP1-208ENST00000521216 SPDYE5A6NIY4 337 aa10.63□□□□□ -0.71
SKP1-208ENST00000521216 AP1G2O75843 785 aa10.63□□□□□ -0.71
SKP1-208ENST00000521216 BRICD5Q6PL45 260 aa10.62□□□□□ -0.71
SKP1-208ENST00000521216 PRR7Q8TB68 274 aa10.62□□□□□ -0.71
SKP1-208ENST00000521216 ZPR1O75312 459 aa10.61□□□□□ -0.71
SKP1-208ENST00000521216 TMEM259Q4ZIN3 620 aa10.61□□□□□ -0.71
SKP1-208ENST00000521216 RETREG3Q86VR2 466 aa10.61□□□□□ -0.71
SKP1-208ENST00000521216 ZNF516Q92618 1163 aa10.61□□□□□ -0.71
SKP1-208ENST00000521216 SPSB2Q99619 263 aa10.61□□□□□ -0.71
SKP1-208ENST00000521216 USB1Q9BQ65 265 aaKnown RBP10.61□□□□□ -0.71
SKP1-208ENST00000521216 IL21Q9HBE4 155 aa10.61□□□□□ -0.71
SKP1-208ENST00000521216 CFAP99D6REC4 459 aa10.6□□□□□ -0.71
SKP1-208ENST00000521216 TLL1O43897 1013 aa10.6□□□□□ -0.71
SKP1-208ENST00000521216 TJAP1Q5JTD0 557 aa10.6□□□□□ -0.71
SKP1-208ENST00000521216 C14orf37Q86TY3 774 aa10.59□□□□□ -0.71
SKP1-208ENST00000521216 HELBQ8NG08 1087 aaPredicted RBP10.59□□□□□ -0.71
SKP1-208ENST00000521216 THAP11Q96EK4 314 aa10.59□□□□□ -0.71
SKP1-208ENST00000521216 SALL2Q9Y467 1007 aaPredicted RBP10.59□□□□□ -0.71
SKP1-208ENST00000521216 CTDSPL2Q05D32 466 aa10.57□□□□□ -0.72
SKP1-208ENST00000521216 FLIIQ13045 1269 aa10.57□□□□□ -0.72
SKP1-208ENST00000521216 BANK1Q8NDB2 785 aa10.55□□□□□ -0.72
SKP1-208ENST00000521216 NKX2-3Q8TAU0 364 aa10.55□□□□□ -0.72
SKP1-208ENST00000521216 SNRKQ9NRH2 765 aa10.55□□□□□ -0.72
SKP1-208ENST00000521216 ADH1BP00325 375 aa10.54□□□□□ -0.72
SKP1-208ENST00000521216 USP17L8P0C7I0 530 aa10.54□□□□□ -0.72
SKP1-208ENST00000521216 KCNC4Q03721 635 aa10.54□□□□□ -0.72
SKP1-208ENST00000521216 FAM160A2Q8N612 972 aaPredicted RBP10.54□□□□□ -0.72
SKP1-208ENST00000521216 PRDM9Q9NQV7 894 aa10.53□□□□□ -0.72
SKP1-208ENST00000521216 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
SKP1-208ENST00000521216 TIMELESSQ9UNS1 1208 aa10.53□□□□□ -0.72
SKP1-208ENST00000521216 MCM6Q14566 821 aa10.52□□□□□ -0.73
SKP1-208ENST00000521216 LRRN4Q8WUT4 740 aa10.52□□□□□ -0.73
SKP1-208ENST00000521216 PER1O15534 1290 aaPredicted RBP10.51□□□□□ -0.73
SKP1-208ENST00000521216 SLC6A16Q9GZN6 736 aa10.51□□□□□ -0.73
SKP1-208ENST00000521216 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
SKP1-208ENST00000521216 JUNDP17535 347 aa10.5□□□□□ -0.73
SKP1-208ENST00000521216 MSS51Q4VC12 460 aa10.5□□□□□ -0.73
SKP1-208ENST00000521216 DESI1Q6ICB0 168 aa10.49□□□□□ -0.73
SKP1-208ENST00000521216 ERICH6Q7L0X2 663 aa10.49□□□□□ -0.73
SKP1-208ENST00000521216 ITGBL1O95965 494 aaPredicted RBP10.48□□□□□ -0.73
SKP1-208ENST00000521216 S1PR4O95977 384 aa10.48□□□□□ -0.73
SKP1-208ENST00000521216 LYPD8Q6UX82 237 aa10.48□□□□□ -0.73
SKP1-208ENST00000521216 MTMR14Q8NCE2 650 aa10.48□□□□□ -0.73
SKP1-208ENST00000521216 CCDC24Q8N4L8 307 aa10.47□□□□□ -0.73
SKP1-208ENST00000521216 HMX1Q9NP08 348 aaPredicted RBP10.47□□□□□ -0.73
SKP1-208ENST00000521216 DXOO77932 396 aaKnown RBP10.46□□□□□ -0.73
SKP1-208ENST00000521216 CTHP32929 405 aa10.46□□□□□ -0.73
SKP1-208ENST00000521216 APBB1O00213 710 aa10.45□□□□□ -0.74
SKP1-208ENST00000521216 RAD21O60216 631 aa10.45□□□□□ -0.74
SKP1-208ENST00000521216 MMP16P51512 607 aa10.45□□□□□ -0.74
SKP1-208ENST00000521216 NUDT12Q9BQG2 462 aa10.45□□□□□ -0.74
SKP1-208ENST00000521216 PTPRNQ16849 979 aa10.44□□□□□ -0.74
SKP1-208ENST00000521216 CLUAP1Q96AJ1 413 aa10.44□□□□□ -0.74
SKP1-208ENST00000521216 PPEF1O14829 653 aaPredicted RBP10.43□□□□□ -0.74
SKP1-208ENST00000521216 CCNYL3P0C7X3 344 aa10.43□□□□□ -0.74
SKP1-208ENST00000521216 NR6A1Q15406 480 aa10.43□□□□□ -0.74
SKP1-208ENST00000521216 PRM3Q9NNZ6 103 aa10.43□□□□□ -0.74
SKP1-208ENST00000521216 GGCXP38435 758 aa10.42□□□□□ -0.74
SKP1-208ENST00000521216 EPS8L1Q8TE68 723 aa10.42□□□□□ -0.74
SKP1-208ENST00000521216 POM121Q96HA1 1249 aa10.42□□□□□ -0.74
SKP1-208ENST00000521216 ZMYND15Q9H091 742 aa10.42□□□□□ -0.74
SKP1-208ENST00000521216 GDPD2Q9HCC8 539 aa10.42□□□□□ -0.74
SKP1-208ENST00000521216 GJD4Q96KN9 370 aaPredicted RBP10.41□□□□□ -0.74
SKP1-208ENST00000521216 MAP10Q9P2G4 905 aa10.41□□□□□ -0.74
SKP1-208ENST00000521216 FCF1Q9Y324 198 aaKnown RBP10.41□□□□□ -0.74
SKP1-208ENST00000521216 ABL2P42684 1182 aa10.4□□□□□ -0.74
SKP1-208ENST00000521216 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.74
SKP1-208ENST00000521216 TBC1D2BQ9UPU7 963 aa10.4□□□□□ -0.74
SKP1-208ENST00000521216 PPP1R18Q6NYC8 613 aa10.39□□□□□ -0.75
SKP1-208ENST00000521216 EVA1BQ9NVM1 165 aa10.39□□□□□ -0.75
SKP1-208ENST00000521216 PLA2G2EQ9NZK7 142 aa10.39□□□□□ -0.75
SKP1-208ENST00000521216 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
SKP1-208ENST00000521216 NDUFB9Q9Y6M9 179 aa10.39□□□□□ -0.75
SKP1-208ENST00000521216 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
SKP1-208ENST00000521216 KCNH2Q12809 1159 aa10.38□□□□□ -0.75
SKP1-208ENST00000521216 SOCS7O14512 581 aa10.37□□□□□ -0.75
SKP1-208ENST00000521216 F12P00748 615 aaPredicted RBP10.37□□□□□ -0.75
SKP1-208ENST00000521216 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.37□□□□□ -0.75
SKP1-208ENST00000521216 PTCRAQ6ISU1 281 aaPredicted RBP10.35□□□□□ -0.75
SKP1-208ENST00000521216 PNMA1Q8ND90 353 aa10.35□□□□□ -0.75
SKP1-208ENST00000521216 UNC93B1Q9H1C4 597 aa10.34□□□□□ -0.75
SKP1-208ENST00000521216 ZBTB24O43167 697 aaPredicted RBP10.33□□□□□ -0.76
SKP1-208ENST00000521216 PROSER2Q86WR7 435 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms