RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 PRAM1Q96QH2 718 aa23.39■■□□□ 1.33
TNPO1-212ENST00000520850 TIMELESSQ9UNS1 1208 aa23.39■■□□□ 1.33
TNPO1-212ENST00000520850 BRINP3Q76B58 766 aa23.38■■□□□ 1.33
TNPO1-212ENST00000520850 POGKQ9P215 609 aa23.38■■□□□ 1.33
TNPO1-212ENST00000520850 TRAK1Q9UPV9 953 aa23.38■■□□□ 1.33
TNPO1-212ENST00000520850 TONSLQ96HA7 1378 aa23.38■■□□□ 1.33
TNPO1-212ENST00000520850 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
TNPO1-212ENST00000520850 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
TNPO1-212ENST00000520850 AHDC1Q5TGY3 1603 aaPredicted RBP23.33■■□□□ 1.32
TNPO1-212ENST00000520850 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
TNPO1-212ENST00000520850 NBPF8Q3BBV2 869 aa23.3■■□□□ 1.32
TNPO1-212ENST00000520850 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
TNPO1-212ENST00000520850 ADGRB2O60241 1585 aa23.3■■□□□ 1.32
TNPO1-212ENST00000520850 GPRASP1Q5JY77 1395 aa23.29■■□□□ 1.32
TNPO1-212ENST00000520850 ARHGEF28Q8N1W1 1705 aaKnown RBP23.28■■□□□ 1.32
TNPO1-212ENST00000520850 ORAI2Q96SN7 254 aa23.27■■□□□ 1.32
TNPO1-212ENST00000520850 PHLPP1O60346 1717 aa23.27■■□□□ 1.32
TNPO1-212ENST00000520850 FMN2Q9NZ56 1722 aa23.27■■□□□ 1.32
TNPO1-212ENST00000520850 EIF3AQ14152 1382 aaKnown RBP23.27■■□□□ 1.31
TNPO1-212ENST00000520850 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
TNPO1-212ENST00000520850 ROCK2O75116 1388 aaKnown RBP23.26■■□□□ 1.31
TNPO1-212ENST00000520850 NHSL1Q5SYE7 1610 aa23.26■■□□□ 1.31
TNPO1-212ENST00000520850 WASLO00401 505 aaPredicted RBP23.25■■□□□ 1.31
TNPO1-212ENST00000520850 ESCO1Q5FWF5 840 aa23.25■■□□□ 1.31
TNPO1-212ENST00000520850 COL16A1Q07092 1604 aaPredicted RBP23.25■■□□□ 1.31
TNPO1-212ENST00000520850 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
TNPO1-212ENST00000520850 LRRC59Q96AG4 307 aaKnown RBP23.24■■□□□ 1.31
TNPO1-212ENST00000520850 SOS2Q07890 1332 aaPredicted RBP23.24■■□□□ 1.31
TNPO1-212ENST00000520850 JCADQ9P266 1359 aa23.24■■□□□ 1.31
TNPO1-212ENST00000520850 CENPJQ9HC77 1338 aaPredicted RBP23.22■■□□□ 1.31
TNPO1-212ENST00000520850 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
TNPO1-212ENST00000520850 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
TNPO1-212ENST00000520850 MINK1Q8N4C8 1332 aaPredicted RBP23.21■■□□□ 1.31
TNPO1-212ENST00000520850 RALGAPBQ86X10 1494 aa23.21■■□□□ 1.31
TNPO1-212ENST00000520850 SPATA31A6Q5VVP1 1343 aa23.18■■□□□ 1.3
TNPO1-212ENST00000520850 HIRIP3Q9BW71 556 aaPredicted RBP23.18■■□□□ 1.3
TNPO1-212ENST00000520850 NUTM2FA1L443 756 aa23.17■■□□□ 1.3
TNPO1-212ENST00000520850 CARD11Q9BXL7 1154 aa23.17■■□□□ 1.3
TNPO1-212ENST00000520850 PHF8Q9UPP1 1060 aa23.17■■□□□ 1.3
TNPO1-212ENST00000520850 TULP4Q9NRJ4 1543 aa23.17■■□□□ 1.3
TNPO1-212ENST00000520850 KIF1AQ12756 1690 aa23.16■■□□□ 1.3
TNPO1-212ENST00000520850 FOXO3O43524 673 aa23.15■■□□□ 1.3
TNPO1-212ENST00000520850 CDK19Q9BWU1 502 aa23.15■■□□□ 1.3
TNPO1-212ENST00000520850 SHPRHQ149N8 1683 aa23.14■■□□□ 1.29
TNPO1-212ENST00000520850 DDX17Q92841 729 aaKnown RBP23.14■■□□□ 1.29
TNPO1-212ENST00000520850 USP32Q8NFA0 1604 aa23.14■■□□□ 1.29
TNPO1-212ENST00000520850 SBNO2Q9Y2G9 1366 aa23.14■■□□□ 1.29
TNPO1-212ENST00000520850 PRR36Q9H6K5 1346 aa23.12■■□□□ 1.29
TNPO1-212ENST00000520850 RGPD8O14715 1765 aaPredicted RBP23.12■■□□□ 1.29
TNPO1-212ENST00000520850 SLC24A1O60721 1099 aa23.12■■□□□ 1.29
TNPO1-212ENST00000520850 NUDT16Q96DE0 195 aaKnown RBP23.12■■□□□ 1.29
TNPO1-212ENST00000520850 CCDC61Q9Y6R9 512 aa23.12■■□□□ 1.29
TNPO1-212ENST00000520850 PXDNQ92626 1479 aa23.11■■□□□ 1.29
TNPO1-212ENST00000520850 PSME1Q06323 249 aa23.11■■□□□ 1.29
TNPO1-212ENST00000520850 MED1Q15648 1581 aaPredicted RBP23.1■■□□□ 1.29
TNPO1-212ENST00000520850 ATP7BP35670 1465 aa23.09■■□□□ 1.29
TNPO1-212ENST00000520850 EVC2Q86UK5 1308 aa23.08■■□□□ 1.29
TNPO1-212ENST00000520850 PLEKHG3A1L390 1219 aa23.08■■□□□ 1.29
TNPO1-212ENST00000520850 KRT28Q7Z3Y7 464 aa23.08■■□□□ 1.29
TNPO1-212ENST00000520850 PNPLA6Q8IY17 1366 aa23.08■■□□□ 1.29
TNPO1-212ENST00000520850 QRICH2Q9H0J4 1663 aa23.08■■□□□ 1.29
TNPO1-212ENST00000520850 DISP3Q9P2K9 1392 aa23.07■■□□□ 1.28
TNPO1-212ENST00000520850 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
TNPO1-212ENST00000520850 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
TNPO1-212ENST00000520850 SPATA31A3Q5VYP0 1347 aa23.05■■□□□ 1.28
TNPO1-212ENST00000520850 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
TNPO1-212ENST00000520850 PMFBP1Q8TBY8 1022 aa23.04■■□□□ 1.28
TNPO1-212ENST00000520850 POLR3AO14802 1390 aaPredicted RBP23.03■■□□□ 1.28
TNPO1-212ENST00000520850 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
TNPO1-212ENST00000520850 COL22A1Q8NFW1 1626 aaPredicted RBP23.02■■□□□ 1.28
TNPO1-212ENST00000520850 NGDNQ8NEJ9 315 aaKnown RBP23.02■■□□□ 1.28
TNPO1-212ENST00000520850 CABP2Q9NPB3 220 aa23■■□□□ 1.27
TNPO1-212ENST00000520850 TOPAZ1Q8N9V7 1692 aa23■■□□□ 1.27
TNPO1-212ENST00000520850 XPCQ01831 940 aaPredicted RBP22.99■■□□□ 1.27
TNPO1-212ENST00000520850 BRD4O60885 1362 aaPredicted RBP22.99■■□□□ 1.27
TNPO1-212ENST00000520850 TESK2Q96S53 571 aa22.98■■□□□ 1.27
TNPO1-212ENST00000520850 ARHGEF10O15013 1369 aa22.98■■□□□ 1.27
TNPO1-212ENST00000520850 TNS3Q68CZ2 1445 aa22.98■■□□□ 1.27
TNPO1-212ENST00000520850 LRP6O75581 1613 aa22.97■■□□□ 1.27
TNPO1-212ENST00000520850 ST20-MTHFSA0A0A6YYL1 179 aa22.97■■□□□ 1.27
TNPO1-212ENST00000520850 ACEP12821 1306 aa22.97■■□□□ 1.27
TNPO1-212ENST00000520850 ATAD2Q6PL18 1390 aa22.97■■□□□ 1.27
TNPO1-212ENST00000520850 PPIP5K1Q6PFW1 1433 aa22.96■■□□□ 1.27
TNPO1-212ENST00000520850 RGS17Q9UGC6 210 aaPredicted RBP22.95■■□□□ 1.26
TNPO1-212ENST00000520850 USP47Q96K76 1375 aa22.94■■□□□ 1.26
TNPO1-212ENST00000520850 ZNF692Q9BU19 519 aaPredicted RBP22.94■■□□□ 1.26
TNPO1-212ENST00000520850 CABP1Q9NZU7 370 aa22.94■■□□□ 1.26
TNPO1-212ENST00000520850 TRPM3Q9HCF6 1732 aaPredicted RBP22.94■■□□□ 1.26
TNPO1-212ENST00000520850 NUTM2BA6NNL0 878 aaPredicted RBP22.93■■□□□ 1.26
TNPO1-212ENST00000520850 NUTM2EB1AL46 878 aaPredicted RBP22.93■■□□□ 1.26
TNPO1-212ENST00000520850 NUTM2AQ8IVF1 878 aaPredicted RBP22.93■■□□□ 1.26
TNPO1-212ENST00000520850 MEX3CQ5U5Q3 659 aaKnown RBP22.92■■□□□ 1.26
TNPO1-212ENST00000520850 ZNF772Q68DY9 489 aaPredicted RBP22.9■■□□□ 1.26
TNPO1-212ENST00000520850 ALS2Q96Q42 1657 aa22.89■■□□□ 1.25
TNPO1-212ENST00000520850 TMF1P82094 1093 aa22.87■■□□□ 1.25
TNPO1-212ENST00000520850 FNBP4Q8N3X1 1017 aaPredicted RBP22.87■■□□□ 1.25
TNPO1-212ENST00000520850 CPSF1Q10570 1443 aaKnown RBP22.86■■□□□ 1.25
TNPO1-212ENST00000520850 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
TNPO1-212ENST00000520850 NINLQ9Y2I6 1382 aa22.86■■□□□ 1.25
TNPO1-212ENST00000520850 SSH2Q76I76 1423 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms