RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 USP32Q8NFA0 1604 aa10.73□□□□□ -0.69
TRAPPC9-207ENST00000520532 ATF3P18847 181 aa10.72□□□□□ -0.69
TRAPPC9-207ENST00000520532 C14orf37Q86TY3 774 aa10.72□□□□□ -0.69
TRAPPC9-207ENST00000520532 GPRASP1Q5JY77 1395 aa10.72□□□□□ -0.69
TRAPPC9-207ENST00000520532 TONSLQ96HA7 1378 aa10.72□□□□□ -0.69
TRAPPC9-207ENST00000520532 ANKARQ7Z5J8 1434 aa10.72□□□□□ -0.69
TRAPPC9-207ENST00000520532 TULP4Q9NRJ4 1543 aa10.72□□□□□ -0.69
TRAPPC9-207ENST00000520532 COL22A1Q8NFW1 1626 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC9-207ENST00000520532 MED1Q15648 1581 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC9-207ENST00000520532 C1orf167Q5SNV9 1468 aa10.71□□□□□ -0.69
TRAPPC9-207ENST00000520532 CFAP70Q5T0N1 1121 aa10.7□□□□□ -0.7
TRAPPC9-207ENST00000520532 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
TRAPPC9-207ENST00000520532 RGPD8O14715 1765 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC9-207ENST00000520532 SCAF1Q9H7N4 1312 aaKnown RBP10.68□□□□□ -0.7
TRAPPC9-207ENST00000520532 PIP4K2BP78356 416 aa10.68□□□□□ -0.7
TRAPPC9-207ENST00000520532 PLEKHH1Q9ULM0 1364 aa10.67□□□□□ -0.7
TRAPPC9-207ENST00000520532 SBNO2Q9Y2G9 1366 aa10.67□□□□□ -0.7
TRAPPC9-207ENST00000520532 TMEM132EQ6IEE7 984 aa10.67□□□□□ -0.7
TRAPPC9-207ENST00000520532 L3MBTL2Q969R5 705 aa10.67□□□□□ -0.7
TRAPPC9-207ENST00000520532 TIMELESSQ9UNS1 1208 aa10.67□□□□□ -0.7
TRAPPC9-207ENST00000520532 ATP7BP35670 1465 aa10.67□□□□□ -0.7
TRAPPC9-207ENST00000520532 HSPA1LP34931 641 aa10.66□□□□□ -0.7
TRAPPC9-207ENST00000520532 RBM33Q96EV2 1170 aaKnown RBP10.66□□□□□ -0.7
TRAPPC9-207ENST00000520532 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
TRAPPC9-207ENST00000520532 ABCA3Q99758 1704 aa10.66□□□□□ -0.7
TRAPPC9-207ENST00000520532 TRPM3Q9HCF6 1732 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-207ENST00000520532 MARF1Q9Y4F3 1742 aaKnown RBP10.66□□□□□ -0.7
TRAPPC9-207ENST00000520532 PXDNQ92626 1479 aa10.66□□□□□ -0.7
TRAPPC9-207ENST00000520532 ROCK2O75116 1388 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-207ENST00000520532 JCADQ9P266 1359 aa10.65□□□□□ -0.7
TRAPPC9-207ENST00000520532 BRINP3Q76B58 766 aa10.65□□□□□ -0.7
TRAPPC9-207ENST00000520532 SIN3AQ96ST3 1273 aa10.65□□□□□ -0.7
TRAPPC9-207ENST00000520532 PRAM1Q96QH2 718 aa10.64□□□□□ -0.71
TRAPPC9-207ENST00000520532 PCGF6Q9BYE7 350 aa10.64□□□□□ -0.71
TRAPPC9-207ENST00000520532 STK26Q9P289 416 aa10.64□□□□□ -0.71
TRAPPC9-207ENST00000520532 ALS2Q96Q42 1657 aa10.63□□□□□ -0.71
TRAPPC9-207ENST00000520532 CRYBG1Q9Y4K1 1723 aa10.63□□□□□ -0.71
TRAPPC9-207ENST00000520532 NPHP3Q7Z494 1330 aa10.62□□□□□ -0.71
TRAPPC9-207ENST00000520532 WAPLQ7Z5K2 1190 aa10.62□□□□□ -0.71
TRAPPC9-207ENST00000520532 POGKQ9P215 609 aa10.62□□□□□ -0.71
TRAPPC9-207ENST00000520532 SPATA31A6Q5VVP1 1343 aa10.61□□□□□ -0.71
TRAPPC9-207ENST00000520532 CENPJQ9HC77 1338 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-207ENST00000520532 NEUROD1Q13562 356 aa10.61□□□□□ -0.71
TRAPPC9-207ENST00000520532 TRAK1Q9UPV9 953 aa10.61□□□□□ -0.71
TRAPPC9-207ENST00000520532 AKAP12Q02952 1782 aa10.61□□□□□ -0.71
TRAPPC9-207ENST00000520532 NRKQ7Z2Y5 1582 aa10.6□□□□□ -0.71
TRAPPC9-207ENST00000520532 SOS2Q07890 1332 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-207ENST00000520532 MON2Q7Z3U7 1717 aa10.6□□□□□ -0.71
TRAPPC9-207ENST00000520532 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-207ENST00000520532 USP54Q70EL1 1684 aa10.59□□□□□ -0.71
TRAPPC9-207ENST00000520532 TNS3Q68CZ2 1445 aa10.58□□□□□ -0.72
TRAPPC9-207ENST00000520532 PHRF1Q9P1Y6 1649 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-207ENST00000520532 PNPLA6Q8IY17 1366 aa10.58□□□□□ -0.72
TRAPPC9-207ENST00000520532 WASLO00401 505 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-207ENST00000520532 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
TRAPPC9-207ENST00000520532 LRP6O75581 1613 aa10.58□□□□□ -0.72
TRAPPC9-207ENST00000520532 SBNO1A3KN83 1393 aa10.57□□□□□ -0.72
TRAPPC9-207ENST00000520532 POLR3AO14802 1390 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-207ENST00000520532 BRD4O60885 1362 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-207ENST00000520532 LRRC59Q96AG4 307 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-207ENST00000520532 NWD2Q9ULI1 1742 aa10.56□□□□□ -0.72
TRAPPC9-207ENST00000520532 NBPF8Q3BBV2 869 aa10.56□□□□□ -0.72
TRAPPC9-207ENST00000520532 MINK1Q8N4C8 1332 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-207ENST00000520532 ARHGEF10O15013 1369 aa10.55□□□□□ -0.72
TRAPPC9-207ENST00000520532 ATAD2Q6PL18 1390 aa10.55□□□□□ -0.72
TRAPPC9-207ENST00000520532 PLCH1Q4KWH8 1693 aa10.55□□□□□ -0.72
TRAPPC9-207ENST00000520532 SLC24A1O60721 1099 aa10.55□□□□□ -0.72
TRAPPC9-207ENST00000520532 SAFB2Q14151 953 aaKnown RBP eCLIP10.55□□□□□ -0.722e-7■■■■□ 23
TRAPPC9-207ENST00000520532 ESCO1Q5FWF5 840 aa10.55□□□□□ -0.72
TRAPPC9-207ENST00000520532 ORAI2Q96SN7 254 aa10.55□□□□□ -0.72
TRAPPC9-207ENST00000520532 PRR36Q9H6K5 1346 aa10.55□□□□□ -0.72
TRAPPC9-207ENST00000520532 NINLQ9Y2I6 1382 aa10.54□□□□□ -0.72
TRAPPC9-207ENST00000520532 CCER1Q8TC90 406 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-207ENST00000520532 CARD11Q9BXL7 1154 aa10.54□□□□□ -0.72
TRAPPC9-207ENST00000520532 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
TRAPPC9-207ENST00000520532 EVC2Q86UK5 1308 aa10.54□□□□□ -0.72
TRAPPC9-207ENST00000520532 MYOM1P52179 1685 aa10.53□□□□□ -0.72
TRAPPC9-207ENST00000520532 PPIP5K1Q6PFW1 1433 aa10.53□□□□□ -0.72
TRAPPC9-207ENST00000520532 USP47Q96K76 1375 aa10.52□□□□□ -0.72
TRAPPC9-207ENST00000520532 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.72
TRAPPC9-207ENST00000520532 HIRIP3Q9BW71 556 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-207ENST00000520532 PIK3C2AO00443 1686 aa10.52□□□□□ -0.73
TRAPPC9-207ENST00000520532 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-207ENST00000520532 NRAPQ86VF7 1730 aa10.51□□□□□ -0.73
TRAPPC9-207ENST00000520532 PSME1Q06323 249 aa10.51□□□□□ -0.73
TRAPPC9-207ENST00000520532 PUS7Q96PZ0 661 aaKnown RBP10.51□□□□□ -0.73
TRAPPC9-207ENST00000520532 CCDC61Q9Y6R9 512 aa10.51□□□□□ -0.73
TRAPPC9-207ENST00000520532 SPATA31A3Q5VYP0 1347 aa10.51□□□□□ -0.73
TRAPPC9-207ENST00000520532 USP6P35125 1406 aa10.5□□□□□ -0.73
TRAPPC9-207ENST00000520532 ABCC6O95255 1503 aa10.5□□□□□ -0.73
TRAPPC9-207ENST00000520532 FOXO3O43524 673 aa10.5□□□□□ -0.73
TRAPPC9-207ENST00000520532 NUDT16Q96DE0 195 aaKnown RBP10.5□□□□□ -0.73
TRAPPC9-207ENST00000520532 CDK19Q9BWU1 502 aa10.5□□□□□ -0.73
TRAPPC9-207ENST00000520532 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
TRAPPC9-207ENST00000520532 CPSF1Q10570 1443 aaKnown RBP10.49□□□□□ -0.73
TRAPPC9-207ENST00000520532 CDK12Q9NYV4 1490 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC9-207ENST00000520532 SLIT3O75094 1523 aa10.48□□□□□ -0.73
TRAPPC9-207ENST00000520532 NUTM2FA1L443 756 aa10.48□□□□□ -0.73
TRAPPC9-207ENST00000520532 SRPK2P78362 688 aaKnown RBP10.48□□□□□ -0.73
TRAPPC9-207ENST00000520532 SSH2Q76I76 1423 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms