RNA–Protein interactions for RNA: ENST00000520389.5

ITGB2-216, Transcript of integrin subunit beta 2, humanhuman

TSL 5

Gene ITGB2, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-216ENST00000520389 QTRT2Q9H974 415 aaKnown RBP20.29■□□□□ 0.84
ITGB2-216ENST00000520389 PIK3C2GO75747 1445 aa20.28■□□□□ 0.84
ITGB2-216ENST00000520389 IFT172Q9UG01 1749 aa20.28■□□□□ 0.84
ITGB2-216ENST00000520389 MYOM2P54296 1465 aa20.27■□□□□ 0.84
ITGB2-216ENST00000520389 DHX57Q6P158 1386 aaKnown RBP20.27■□□□□ 0.84
ITGB2-216ENST00000520389 CFAP70Q5T0N1 1121 aa20.27■□□□□ 0.84
ITGB2-216ENST00000520389 TMEM132EQ6IEE7 984 aa20.27■□□□□ 0.84
ITGB2-216ENST00000520389 C8orf37Q96NL8 207 aa20.27■□□□□ 0.84
ITGB2-216ENST00000520389 NRXN1Q9ULB1 1477 aa20.26■□□□□ 0.83
ITGB2-216ENST00000520389 LAMC1P11047 1609 aa20.26■□□□□ 0.83
ITGB2-216ENST00000520389 C1orf167Q5SNV9 1468 aa20.25■□□□□ 0.83
ITGB2-216ENST00000520389 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
ITGB2-216ENST00000520389 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
ITGB2-216ENST00000520389 STK26Q9P289 416 aa20.24■□□□□ 0.83
ITGB2-216ENST00000520389 ORAI2Q96SN7 254 aa20.23■□□□□ 0.83
ITGB2-216ENST00000520389 ROBO2Q9HCK4 1378 aa20.22■□□□□ 0.83
ITGB2-216ENST00000520389 NEUROD1Q13562 356 aa20.22■□□□□ 0.83
ITGB2-216ENST00000520389 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
ITGB2-216ENST00000520389 SOS2Q07890 1332 aaPredicted RBP20.22■□□□□ 0.83
ITGB2-216ENST00000520389 LRPPRCP42704 1394 aaKnown RBP20.21■□□□□ 0.83
ITGB2-216ENST00000520389 ABCC11Q96J66 1382 aa20.21■□□□□ 0.83
ITGB2-216ENST00000520389 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
ITGB2-216ENST00000520389 PRAG1Q86YV5 1406 aa20.2■□□□□ 0.82
ITGB2-216ENST00000520389 ADAMTS2O95450 1211 aa20.2■□□□□ 0.82
ITGB2-216ENST00000520389 SIRT1Q96EB6 747 aa20.19■□□□□ 0.82
ITGB2-216ENST00000520389 SRCAPQ6ZRS2 3230 aa20.18■□□□□ 0.82
ITGB2-216ENST00000520389 L3MBTL2Q969R5 705 aa20.18■□□□□ 0.82
ITGB2-216ENST00000520389 NGLY1Q96IV0 654 aa20.18■□□□□ 0.82
ITGB2-216ENST00000520389 YTHDC2Q9H6S0 1430 aaKnown RBP20.18■□□□□ 0.82
ITGB2-216ENST00000520389 WAPLQ7Z5K2 1190 aa20.17■□□□□ 0.82
ITGB2-216ENST00000520389 FNBP4Q8N3X1 1017 aaPredicted RBP20.16■□□□□ 0.82
ITGB2-216ENST00000520389 TECPR2O15040 1411 aa20.16■□□□□ 0.82
ITGB2-216ENST00000520389 USP21Q9UK80 565 aa20.13■□□□□ 0.81
ITGB2-216ENST00000520389 COL22A1Q8NFW1 1626 aaPredicted RBP20.13■□□□□ 0.81
ITGB2-216ENST00000520389 ATRNO75882 1429 aa20.12■□□□□ 0.81
ITGB2-216ENST00000520389 TRAK1Q9UPV9 953 aa20.11■□□□□ 0.81
ITGB2-216ENST00000520389 PLEKHH1Q9ULM0 1364 aa20.1■□□□□ 0.81
ITGB2-216ENST00000520389 TRPC5Q9UL62 973 aaPredicted RBP20.1■□□□□ 0.81
ITGB2-216ENST00000520389 ADGRB1O14514 1584 aa20.09■□□□□ 0.81
ITGB2-216ENST00000520389 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
ITGB2-216ENST00000520389 BCL9LQ86UU0 1499 aa20.09■□□□□ 0.81
ITGB2-216ENST00000520389 ATAD2Q6PL18 1390 aa20.08■□□□□ 0.81
ITGB2-216ENST00000520389 POGKQ9P215 609 aa20.08■□□□□ 0.81
ITGB2-216ENST00000520389 PXDNQ92626 1479 aa20.07■□□□□ 0.8
ITGB2-216ENST00000520389 EP400Q96L91 3159 aa20.07■□□□□ 0.8
ITGB2-216ENST00000520389 NBPF1Q3BBV0 1214 aa20.07■□□□□ 0.8
ITGB2-216ENST00000520389 SAFB2Q14151 953 aaKnown RBP eCLIP20.06■□□□□ 0.8
ITGB2-216ENST00000520389 KNDC1Q76NI1 1749 aa20.05■□□□□ 0.8
ITGB2-216ENST00000520389 DLC1Q96QB1 1528 aa20.04■□□□□ 0.8
ITGB2-216ENST00000520389 MARF1Q9Y4F3 1742 aaKnown RBP20.04■□□□□ 0.8
ITGB2-216ENST00000520389 XPCQ01831 940 aaPredicted RBP20.03■□□□□ 0.8
ITGB2-216ENST00000520389 CDC42BPGQ6DT37 1551 aa20.03■□□□□ 0.8
ITGB2-216ENST00000520389 FOXO3O43524 673 aa20.02■□□□□ 0.8
ITGB2-216ENST00000520389 ESCO1Q5FWF5 840 aa20.02■□□□□ 0.8
ITGB2-216ENST00000520389 TONSLQ96HA7 1378 aa20.01■□□□□ 0.79
ITGB2-216ENST00000520389 NPHP3Q7Z494 1330 aa20.01■□□□□ 0.79
ITGB2-216ENST00000520389 NUTM2FA1L443 756 aa20■□□□□ 0.79
ITGB2-216ENST00000520389 KIAA1210Q9ULL0 1709 aa19.99■□□□□ 0.79
ITGB2-216ENST00000520389 NBPF8Q3BBV2 869 aa19.99■□□□□ 0.79
ITGB2-216ENST00000520389 GJD4Q96KN9 370 aaPredicted RBP19.99■□□□□ 0.79
ITGB2-216ENST00000520389 MINK1Q8N4C8 1332 aaPredicted RBP19.98■□□□□ 0.79
ITGB2-216ENST00000520389 GLI3P10071 1580 aa19.97■□□□□ 0.79
ITGB2-216ENST00000520389 CLSPNQ9HAW4 1339 aa19.97■□□□□ 0.79
ITGB2-216ENST00000520389 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
ITGB2-216ENST00000520389 ZRANB1Q9UGI0 708 aa19.96■□□□□ 0.79
ITGB2-216ENST00000520389 SLIT2O94813 1529 aa19.96■□□□□ 0.79
ITGB2-216ENST00000520389 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.96■□□□□ 0.79
ITGB2-216ENST00000520389 CCDC125Q86Z20 511 aa19.94■□□□□ 0.78
ITGB2-216ENST00000520389 BRWD3Q6RI45 1802 aa19.94■□□□□ 0.78
ITGB2-216ENST00000520389 RALGAPBQ86X10 1494 aa19.93■□□□□ 0.78
ITGB2-216ENST00000520389 WASLO00401 505 aaPredicted RBP19.93■□□□□ 0.78
ITGB2-216ENST00000520389 SPATA31A3Q5VYP0 1347 aa19.93■□□□□ 0.78
ITGB2-216ENST00000520389 UNC5CLQ8IV45 518 aa19.92■□□□□ 0.78
ITGB2-216ENST00000520389 ROCK2O75116 1388 aaKnown RBP19.92■□□□□ 0.78
ITGB2-216ENST00000520389 FMN2Q9NZ56 1722 aa19.91■□□□□ 0.78
ITGB2-216ENST00000520389 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
ITGB2-216ENST00000520389 TIMELESSQ9UNS1 1208 aa19.91■□□□□ 0.78
ITGB2-216ENST00000520389 CENPJQ9HC77 1338 aaPredicted RBP19.9■□□□□ 0.78
ITGB2-216ENST00000520389 RGPD8O14715 1765 aaPredicted RBP19.9■□□□□ 0.78
ITGB2-216ENST00000520389 PHF8Q9UPP1 1060 aa19.89■□□□□ 0.77
ITGB2-216ENST00000520389 ARHGEF28Q8N1W1 1705 aaKnown RBP19.88■□□□□ 0.77
ITGB2-216ENST00000520389 TRPM1Q7Z4N2 1603 aa19.88■□□□□ 0.77
ITGB2-216ENST00000520389 DEFB132Q7Z7B7 95 aa19.88■□□□□ 0.77
ITGB2-216ENST00000520389 USP32Q8NFA0 1604 aa19.87■□□□□ 0.77
ITGB2-216ENST00000520389 GPRASP1Q5JY77 1395 aa19.87■□□□□ 0.77
ITGB2-216ENST00000520389 KRT28Q7Z3Y7 464 aa19.87■□□□□ 0.77
ITGB2-216ENST00000520389 CDK19Q9BWU1 502 aa19.87■□□□□ 0.77
ITGB2-216ENST00000520389 CARD11Q9BXL7 1154 aa19.87■□□□□ 0.77
ITGB2-216ENST00000520389 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
ITGB2-216ENST00000520389 BLMP54132 1417 aaPredicted RBP19.86■□□□□ 0.77
ITGB2-216ENST00000520389 ANKARQ7Z5J8 1434 aa19.86■□□□□ 0.77
ITGB2-216ENST00000520389 EIF3AQ14152 1382 aaKnown RBP19.86■□□□□ 0.77
ITGB2-216ENST00000520389 PRR36Q9H6K5 1346 aa19.85■□□□□ 0.77
ITGB2-216ENST00000520389 CABLES1Q8TDN4 633 aa19.85■□□□□ 0.77
ITGB2-216ENST00000520389 KIF1AQ12756 1690 aa19.84■□□□□ 0.77
ITGB2-216ENST00000520389 ONECUT3O60422 494 aaPredicted RBP19.84■□□□□ 0.77
ITGB2-216ENST00000520389 PMFBP1Q8TBY8 1022 aa19.84■□□□□ 0.77
ITGB2-216ENST00000520389 NUDT16Q96DE0 195 aaKnown RBP19.84■□□□□ 0.77
ITGB2-216ENST00000520389 SEPT12Q8IYM1 358 aa19.83■□□□□ 0.77
ITGB2-216ENST00000520389 PSME1Q06323 249 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms