RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 Q3C1V9 767 aa11.13□□□□□ -0.63
NPM1-206ENST00000519955 NUTM2DQ5VT03 806 aaPredicted RBP11.13□□□□□ -0.63
NPM1-206ENST00000519955 NUTM2AQ8IVF1 878 aaPredicted RBP11.13□□□□□ -0.63
NPM1-206ENST00000519955 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
NPM1-206ENST00000519955 NR1I2O75469 434 aa11.12□□□□□ -0.63
NPM1-206ENST00000519955 HRCP23327 699 aa11.12□□□□□ -0.63
NPM1-206ENST00000519955 RFC5P40937 340 aa11.12□□□□□ -0.63
NPM1-206ENST00000519955 MTMR2Q13614 643 aa11.12□□□□□ -0.63
NPM1-206ENST00000519955 SLC27A5Q9Y2P5 690 aa11.12□□□□□ -0.63
NPM1-206ENST00000519955 CABLES1Q8TDN4 633 aa11.11□□□□□ -0.63
NPM1-206ENST00000519955 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
NPM1-206ENST00000519955 TMEM259Q4ZIN3 620 aa11.1□□□□□ -0.63
NPM1-206ENST00000519955 SALL2Q9Y467 1007 aaPredicted RBP11.1□□□□□ -0.63
NPM1-206ENST00000519955 FLIIQ13045 1269 aa11.09□□□□□ -0.63
NPM1-206ENST00000519955 FBXO31Q5XUX0 539 aaPredicted RBP11.09□□□□□ -0.63
NPM1-206ENST00000519955 BLOC1S3Q6QNY0 202 aa11.09□□□□□ -0.63
NPM1-206ENST00000519955 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
NPM1-206ENST00000519955 SCUBE3Q8IX30 993 aa11.08□□□□□ -0.64
NPM1-206ENST00000519955 BANK1Q8NDB2 785 aa11.07□□□□□ -0.64
NPM1-206ENST00000519955 RETREG3Q86VR2 466 aa11.06□□□□□ -0.64
NPM1-206ENST00000519955 FMNL1O95466 1100 aaPredicted RBP11.05□□□□□ -0.64
NPM1-206ENST00000519955 COPS2P61201 443 aa11.05□□□□□ -0.64
NPM1-206ENST00000519955 BRICD5Q6PL45 260 aa11.05□□□□□ -0.64
NPM1-206ENST00000519955 C14orf37Q86TY3 774 aa11.05□□□□□ -0.64
NPM1-206ENST00000519955 SYMPKQ92797 1274 aaKnown RBP11.05□□□□□ -0.64
NPM1-206ENST00000519955 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
NPM1-206ENST00000519955 THAP11Q96EK4 314 aa11.04□□□□□ -0.64
NPM1-206ENST00000519955 MTRQ99707 1265 aa11.04□□□□□ -0.64
NPM1-206ENST00000519955 HELBQ8NG08 1087 aaPredicted RBP11.03□□□□□ -0.64
NPM1-206ENST00000519955 USB1Q9BQ65 265 aaKnown RBP11.03□□□□□ -0.64
NPM1-206ENST00000519955 AP1G2O75843 785 aa11.02□□□□□ -0.65
NPM1-206ENST00000519955 PRR7Q8TB68 274 aa11.02□□□□□ -0.65
NPM1-206ENST00000519955 IL21Q9HBE4 155 aa11.02□□□□□ -0.65
NPM1-206ENST00000519955 CFAP99D6REC4 459 aa11.01□□□□□ -0.65
NPM1-206ENST00000519955 ZPR1O75312 459 aa11.01□□□□□ -0.65
NPM1-206ENST00000519955 MCM6Q14566 821 aa11.01□□□□□ -0.65
NPM1-206ENST00000519955 TIMELESSQ9UNS1 1208 aa11.01□□□□□ -0.65
NPM1-206ENST00000519955 TJAP1Q5JTD0 557 aa11□□□□□ -0.65
NPM1-206ENST00000519955 DESI1Q6ICB0 168 aa11□□□□□ -0.65
NPM1-206ENST00000519955 SOCS7O14512 581 aa10.99□□□□□ -0.65
NPM1-206ENST00000519955 TSC1Q92574 1164 aa10.99□□□□□ -0.65
NPM1-206ENST00000519955 SPSB2Q99619 263 aa10.99□□□□□ -0.65
NPM1-206ENST00000519955 USP17L8P0C7I0 530 aa10.98□□□□□ -0.65
NPM1-206ENST00000519955 MSS51Q4VC12 460 aa10.98□□□□□ -0.65
NPM1-206ENST00000519955 APBB1O00213 710 aa10.97□□□□□ -0.65
NPM1-206ENST00000519955 ADH1BP00325 375 aa10.96□□□□□ -0.65
NPM1-206ENST00000519955 CTDSPL2Q05D32 466 aa10.96□□□□□ -0.65
NPM1-206ENST00000519955 SNRKQ9NRH2 765 aa10.96□□□□□ -0.65
NPM1-206ENST00000519955 ZNF516Q92618 1163 aa10.95□□□□□ -0.66
NPM1-206ENST00000519955 TLL1O43897 1013 aa10.94□□□□□ -0.66
NPM1-206ENST00000519955 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
NPM1-206ENST00000519955 JUNDP17535 347 aa10.94□□□□□ -0.66
NPM1-206ENST00000519955 ITGBL1O95965 494 aaPredicted RBP10.93□□□□□ -0.66
NPM1-206ENST00000519955 FAM160A2Q8N612 972 aaPredicted RBP10.93□□□□□ -0.66
NPM1-206ENST00000519955 MTMR14Q8NCE2 650 aa10.93□□□□□ -0.66
NPM1-206ENST00000519955 LYPD8Q6UX82 237 aa10.92□□□□□ -0.66
NPM1-206ENST00000519955 DXOO77932 396 aaKnown RBP10.91□□□□□ -0.66
NPM1-206ENST00000519955 MMP16P51512 607 aa10.91□□□□□ -0.66
NPM1-206ENST00000519955 KCNC4Q03721 635 aa10.91□□□□□ -0.66
NPM1-206ENST00000519955 PRM3Q9NNZ6 103 aa10.91□□□□□ -0.66
NPM1-206ENST00000519955 PTPRNQ16849 979 aa10.9□□□□□ -0.66
NPM1-206ENST00000519955 SLC6A16Q9GZN6 736 aa10.9□□□□□ -0.66
NPM1-206ENST00000519955 ZMYND15Q9H091 742 aa10.9□□□□□ -0.66
NPM1-206ENST00000519955 PER1O15534 1290 aaPredicted RBP10.89□□□□□ -0.67
NPM1-206ENST00000519955 LRRN4Q8WUT4 740 aa10.89□□□□□ -0.67
NPM1-206ENST00000519955 RAD21O60216 631 aa10.88□□□□□ -0.67
NPM1-206ENST00000519955 PRDM9Q9NQV7 894 aa10.88□□□□□ -0.67
NPM1-206ENST00000519955 A6NJR5 290 aa10.87□□□□□ -0.67
NPM1-206ENST00000519955 NKX2-3Q8TAU0 364 aa10.87□□□□□ -0.67
NPM1-206ENST00000519955 HMX1Q9NP08 348 aaPredicted RBP10.87□□□□□ -0.67
NPM1-206ENST00000519955 GJD4Q96KN9 370 aaPredicted RBP10.86□□□□□ -0.67
NPM1-206ENST00000519955 NUDT12Q9BQG2 462 aa10.85□□□□□ -0.67
NPM1-206ENST00000519955 COG6Q9Y2V7 657 aa10.85□□□□□ -0.67
NPM1-206ENST00000519955 NDUFB9Q9Y6M9 179 aa10.85□□□□□ -0.67
NPM1-206ENST00000519955 S1PR4O95977 384 aa10.84□□□□□ -0.67
NPM1-206ENST00000519955 CCNYL3P0C7X3 344 aa10.84□□□□□ -0.67
NPM1-206ENST00000519955 CLUAP1Q96AJ1 413 aa10.84□□□□□ -0.67
NPM1-206ENST00000519955 TRIM34Q9BYJ4 488 aa10.84□□□□□ -0.67
NPM1-206ENST00000519955 F12P00748 615 aaPredicted RBP10.83□□□□□ -0.68
NPM1-206ENST00000519955 PNMA1Q8ND90 353 aa10.83□□□□□ -0.68
NPM1-206ENST00000519955 POM121Q96HA1 1249 aa10.83□□□□□ -0.68
NPM1-206ENST00000519955 EVA1BQ9NVM1 165 aa10.83□□□□□ -0.68
NPM1-206ENST00000519955 NR6A1Q15406 480 aa10.82□□□□□ -0.68
NPM1-206ENST00000519955 IFFO2Q5TF58 517 aa10.82□□□□□ -0.68
NPM1-206ENST00000519955 IRX2Q9BZI1 471 aaPredicted RBP10.82□□□□□ -0.68
NPM1-206ENST00000519955 GGCXP38435 758 aa10.81□□□□□ -0.68
NPM1-206ENST00000519955 GDPD2Q9HCC8 539 aa10.81□□□□□ -0.68
NPM1-206ENST00000519955 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
NPM1-206ENST00000519955 A0A0G2JS52 829 aa10.8□□□□□ -0.68
NPM1-206ENST00000519955 RGS20O76081 388 aa10.8□□□□□ -0.68
NPM1-206ENST00000519955 CTHP32929 405 aa10.8□□□□□ -0.68
NPM1-206ENST00000519955 KCNH2Q12809 1159 aa10.8□□□□□ -0.68
NPM1-206ENST00000519955 PROSER2Q86WR7 435 aaPredicted RBP10.8□□□□□ -0.68
NPM1-206ENST00000519955 WWC1Q8IX03 1113 aa10.8□□□□□ -0.68
NPM1-206ENST00000519955 EPS8L1Q8TE68 723 aa10.79□□□□□ -0.68
NPM1-206ENST00000519955 MAP10Q9P2G4 905 aa10.79□□□□□ -0.68
NPM1-206ENST00000519955 ABL2P42684 1182 aa10.78□□□□□ -0.68
NPM1-206ENST00000519955 CCDC24Q8N4L8 307 aa10.78□□□□□ -0.68
NPM1-206ENST00000519955 ARMC2Q8NEN0 867 aa10.77□□□□□ -0.69
NPM1-206ENST00000519955 FCF1Q9Y324 198 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms