RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 NUTM2EB1AL46 878 aaPredicted RBP6.22□□□□□ -1.41
SKP1-203ENST00000517625 MCM6Q14566 821 aa6.22□□□□□ -1.41
SKP1-203ENST00000517625 QPCTQ16769 361 aa6.22□□□□□ -1.41
SKP1-203ENST00000517625 NUTM2DQ5VT03 806 aaPredicted RBP6.22□□□□□ -1.41
SKP1-203ENST00000517625 DESI1Q6ICB0 168 aa6.22□□□□□ -1.41
SKP1-203ENST00000517625 RETREG3Q86VR2 466 aa6.22□□□□□ -1.41
SKP1-203ENST00000517625 NUTM2AQ8IVF1 878 aaPredicted RBP6.22□□□□□ -1.41
SKP1-203ENST00000517625 HELBQ8NG08 1087 aaPredicted RBP6.22□□□□□ -1.41
SKP1-203ENST00000517625 PCDHB15Q9Y5E8 787 aa6.22□□□□□ -1.41
SKP1-203ENST00000517625 C6orf229H3BNL8 230 aa6.21□□□□□ -1.42
SKP1-203ENST00000517625 CSPP1Q1MSJ5 1256 aa6.21□□□□□ -1.42
SKP1-203ENST00000517625 TIMELESSQ9UNS1 1208 aa6.21□□□□□ -1.42
SKP1-203ENST00000517625 FMNL1O95466 1100 aaPredicted RBP6.2□□□□□ -1.42
SKP1-203ENST00000517625 GUCA2AQ02747 115 aa6.2□□□□□ -1.42
SKP1-203ENST00000517625 SLC27A5Q9Y2P5 690 aa6.2□□□□□ -1.42
SKP1-203ENST00000517625 PUS10Q3MIT2 529 aaKnown RBP6.19□□□□□ -1.42
SKP1-203ENST00000517625 CABLES1Q8TDN4 633 aa6.19□□□□□ -1.42
SKP1-203ENST00000517625 HLA-CQ95604 372 aa6.19□□□□□ -1.42
SKP1-203ENST00000517625 PRM3Q9NNZ6 103 aa6.19□□□□□ -1.42
SKP1-203ENST00000517625 MSS51Q4VC12 460 aa6.18□□□□□ -1.42
SKP1-203ENST00000517625 RTL5Q5HYW3 569 aaPredicted RBP6.18□□□□□ -1.42
SKP1-203ENST00000517625 BRICD5Q6PL45 260 aa6.18□□□□□ -1.42
SKP1-203ENST00000517625 BLOC1S3Q6QNY0 202 aa6.18□□□□□ -1.42
SKP1-203ENST00000517625 SCUBE3Q8IX30 993 aa6.18□□□□□ -1.42
SKP1-203ENST00000517625 THAP11Q96EK4 314 aa6.18□□□□□ -1.42
SKP1-203ENST00000517625 USB1Q9BQ65 265 aaKnown RBP6.18□□□□□ -1.42
SKP1-203ENST00000517625 HCSTQ9UBK5 93 aa6.18□□□□□ -1.42
SKP1-203ENST00000517625 A6NJR5 290 aa6.17□□□□□ -1.42
SKP1-203ENST00000517625 AP1G2O75843 785 aa6.17□□□□□ -1.42
SKP1-203ENST00000517625 USP17L8P0C7I0 530 aa6.17□□□□□ -1.42
SKP1-203ENST00000517625 PRR7Q8TB68 274 aa6.17□□□□□ -1.42
SKP1-203ENST00000517625 RNF166Q96A37 237 aaPredicted RBP6.17□□□□□ -1.42
SKP1-203ENST00000517625 IL21Q9HBE4 155 aa6.17□□□□□ -1.42
SKP1-203ENST00000517625 CFAP99D6REC4 459 aa6.16□□□□□ -1.42
SKP1-203ENST00000517625 UBTFP17480 764 aaKnown RBP6.16□□□□□ -1.42
SKP1-203ENST00000517625 FBXO31Q5XUX0 539 aaPredicted RBP6.16□□□□□ -1.42
SKP1-203ENST00000517625 SPNS2Q8IVW8 549 aa6.16□□□□□ -1.42
SKP1-203ENST00000517625 MTRQ99707 1265 aa6.16□□□□□ -1.42
SKP1-203ENST00000517625 RAD21O60216 631 aa6.15□□□□□ -1.42
SKP1-203ENST00000517625 ZPR1O75312 459 aa6.15□□□□□ -1.42
SKP1-203ENST00000517625 ADH1BP00325 375 aa6.15□□□□□ -1.42
SKP1-203ENST00000517625 PTPN5P54829 565 aa6.15□□□□□ -1.42
SKP1-203ENST00000517625 RNF19BQ6ZMZ0 732 aa6.15□□□□□ -1.42
SKP1-203ENST00000517625 ZMYND15Q9H091 742 aa6.15□□□□□ -1.42
SKP1-203ENST00000517625 JUNDP17535 347 aa6.14□□□□□ -1.43
SKP1-203ENST00000517625 PTPRNQ16849 979 aa6.14□□□□□ -1.43
SKP1-203ENST00000517625 TJAP1Q5JTD0 557 aa6.14□□□□□ -1.43
SKP1-203ENST00000517625 WWC1Q8IX03 1113 aa6.14□□□□□ -1.43
SKP1-203ENST00000517625 MTMR14Q8NCE2 650 aa6.14□□□□□ -1.43
SKP1-203ENST00000517625 PNMA1Q8ND90 353 aa6.14□□□□□ -1.43
SKP1-203ENST00000517625 SPSB2Q99619 263 aa6.14□□□□□ -1.43
SKP1-203ENST00000517625 DXOO77932 396 aaKnown RBP6.13□□□□□ -1.43
SKP1-203ENST00000517625 ITGBL1O95965 494 aaPredicted RBP6.13□□□□□ -1.43
SKP1-203ENST00000517625 MMP16P51512 607 aa6.13□□□□□ -1.43
SKP1-203ENST00000517625 COPS2P61201 443 aa6.13□□□□□ -1.43
SKP1-203ENST00000517625 LYPD8Q6UX82 237 aa6.13□□□□□ -1.43
SKP1-203ENST00000517625 SYMPKQ92797 1274 aaKnown RBP6.13□□□□□ -1.43
SKP1-203ENST00000517625 NDUFB9Q9Y6M9 179 aa6.13□□□□□ -1.43
SKP1-203ENST00000517625 SNRKQ9NRH2 765 aa6.12□□□□□ -1.43
SKP1-203ENST00000517625 ZC3H4Q9UPT8 1303 aaKnown RBP6.11□□□□□ -1.43
SKP1-203ENST00000517625 CTDSPL2Q05D32 466 aa6.11□□□□□ -1.43
SKP1-203ENST00000517625 TSC1Q92574 1164 aa6.11□□□□□ -1.43
SKP1-203ENST00000517625 PROSER2Q86WR7 435 aaPredicted RBP6.1□□□□□ -1.43
SKP1-203ENST00000517625 FAM160A2Q8N612 972 aaPredicted RBP6.1□□□□□ -1.43
SKP1-203ENST00000517625 GJD4Q96KN9 370 aaPredicted RBP6.1□□□□□ -1.43
SKP1-203ENST00000517625 COG6Q9Y2V7 657 aa6.1□□□□□ -1.43
SKP1-203ENST00000517625 F12P00748 615 aaPredicted RBP6.09□□□□□ -1.43
SKP1-203ENST00000517625 CCNYL3P0C7X3 344 aa6.09□□□□□ -1.43
SKP1-203ENST00000517625 KCNC4Q03721 635 aa6.09□□□□□ -1.43
SKP1-203ENST00000517625 SLC6A16Q9GZN6 736 aa6.09□□□□□ -1.43
SKP1-203ENST00000517625 TLL1O43897 1013 aa6.08□□□□□ -1.44
SKP1-203ENST00000517625 GGCXP38435 758 aa6.08□□□□□ -1.44
SKP1-203ENST00000517625 IFFO2Q5TF58 517 aa6.08□□□□□ -1.44
SKP1-203ENST00000517625 ARMC2Q8NEN0 867 aa6.08□□□□□ -1.44
SKP1-203ENST00000517625 LRRN4Q8WUT4 740 aa6.08□□□□□ -1.44
SKP1-203ENST00000517625 GPKOWQ92917 476 aaPredicted RBP eCLIP6.08□□□□□ -1.44
SKP1-203ENST00000517625 NUDT12Q9BQG2 462 aa6.08□□□□□ -1.44
SKP1-203ENST00000517625 TRIM34Q9BYJ4 488 aa6.08□□□□□ -1.44
SKP1-203ENST00000517625 PER1O15534 1290 aaPredicted RBP6.07□□□□□ -1.44
SKP1-203ENST00000517625 MMRN1Q13201 1228 aa6.07□□□□□ -1.44
SKP1-203ENST00000517625 WASHC4Q2M389 1173 aa6.07□□□□□ -1.44
SKP1-203ENST00000517625 FNBP4Q8N3X1 1017 aaPredicted RBP6.07□□□□□ -1.44
SKP1-203ENST00000517625 CLUAP1Q96AJ1 413 aa6.07□□□□□ -1.44
SKP1-203ENST00000517625 HMX1Q9NP08 348 aaPredicted RBP6.07□□□□□ -1.44
SKP1-203ENST00000517625 EVA1BQ9NVM1 165 aa6.07□□□□□ -1.44
SKP1-203ENST00000517625 TRAK2O60296 914 aa6.06□□□□□ -1.44
SKP1-203ENST00000517625 KCNH2Q12809 1159 aa6.06□□□□□ -1.44
SKP1-203ENST00000517625 ZNF592Q92610 1267 aa6.06□□□□□ -1.44
SKP1-203ENST00000517625 ZNF516Q92618 1163 aa6.06□□□□□ -1.44
SKP1-203ENST00000517625 NBPF14Q5TI25 921 aa6.05□□□□□ -1.44
SKP1-203ENST00000517625 POM121Q96HA1 1249 aa6.05□□□□□ -1.44
SKP1-203ENST00000517625 GDPD2Q9HCC8 539 aa6.05□□□□□ -1.44
SKP1-203ENST00000517625 PRDM9Q9NQV7 894 aa6.05□□□□□ -1.44
SKP1-203ENST00000517625 FKBPLQ9UIM3 349 aa6.05□□□□□ -1.44
SKP1-203ENST00000517625 TBC1D2BQ9UPU7 963 aa6.05□□□□□ -1.44
SKP1-203ENST00000517625 GPSM3Q9Y4H4 160 aa6.05□□□□□ -1.44
SKP1-203ENST00000517625 SOX11P35716 441 aa6.04□□□□□ -1.44
SKP1-203ENST00000517625 ABL2P42684 1182 aa6.04□□□□□ -1.44
SKP1-203ENST00000517625 NR6A1Q15406 480 aa6.04□□□□□ -1.44
SKP1-203ENST00000517625 GPR37L1O60883 481 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms