RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 NSD3Q9BZ95 1437 aa8.68□□□□□ -1.02
CDH12-203ENST00000517378 NCBP3Q53F19 620 aaKnown RBP8.68□□□□□ -1.02
CDH12-203ENST00000517378 PUS7Q96PZ0 661 aaKnown RBP8.68□□□□□ -1.02
CDH12-203ENST00000517378 RPGRIP1LQ68CZ1 1315 aa8.68□□□□□ -1.02
CDH12-203ENST00000517378 NEXMIFQ5QGS0 1516 aa8.68□□□□□ -1.02
CDH12-203ENST00000517378 PDE3AQ14432 1141 aa8.67□□□□□ -1.02
CDH12-203ENST00000517378 CCDC146Q8IYE0 955 aa8.67□□□□□ -1.02
CDH12-203ENST00000517378 C14orf93Q9H972 538 aaKnown RBP8.67□□□□□ -1.02
CDH12-203ENST00000517378 SKAP1Q86WV1 359 aa8.67□□□□□ -1.02
CDH12-203ENST00000517378 CGNL1Q0VF96 1302 aa8.67□□□□□ -1.02
CDH12-203ENST00000517378 TULP4Q9NRJ4 1543 aa8.67□□□□□ -1.02
CDH12-203ENST00000517378 ZMYM3Q14202 1370 aa8.67□□□□□ -1.02
CDH12-203ENST00000517378 NSD2O96028 1365 aa8.66□□□□□ -1.02
CDH12-203ENST00000517378 ANKRD26Q9UPS8 1709 aa8.66□□□□□ -1.02
CDH12-203ENST00000517378 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
CDH12-203ENST00000517378 AAMPQ13685 434 aa8.65□□□□□ -1.02
CDH12-203ENST00000517378 DMRT2Q9Y5R5 561 aa8.65□□□□□ -1.02
CDH12-203ENST00000517378 CLTCQ00610 1675 aaKnown RBP8.65□□□□□ -1.02
CDH12-203ENST00000517378 ARHGAP31Q2M1Z3 1444 aa8.65□□□□□ -1.03
CDH12-203ENST00000517378 BCAR3O75815 825 aa8.64□□□□□ -1.03
CDH12-203ENST00000517378 NEFMP07197 916 aa8.64□□□□□ -1.03
CDH12-203ENST00000517378 CCDC27Q2M243 656 aa8.64□□□□□ -1.03
CDH12-203ENST00000517378 ZFYVE9O95405 1425 aa8.64□□□□□ -1.03
CDH12-203ENST00000517378 DIP2CQ9Y2E4 1556 aa8.64□□□□□ -1.03
CDH12-203ENST00000517378 ANKRD36BQ8N2N9 1353 aa8.64□□□□□ -1.03
CDH12-203ENST00000517378 NEO1Q92859 1461 aa8.64□□□□□ -1.03
CDH12-203ENST00000517378 RUNDC1Q96C34 613 aa8.63□□□□□ -1.03
CDH12-203ENST00000517378 LAS1LQ9Y4W2 734 aaKnown RBP8.63□□□□□ -1.03
CDH12-203ENST00000517378 CD109Q6YHK3 1445 aa8.63□□□□□ -1.03
CDH12-203ENST00000517378 WDR63Q8IWG1 891 aa8.63□□□□□ -1.03
CDH12-203ENST00000517378 RICTORQ6R327 1708 aa8.63□□□□□ -1.03
CDH12-203ENST00000517378 NLRP1Q9C000 1473 aa8.63□□□□□ -1.03
CDH12-203ENST00000517378 MAPK8IP3Q9UPT6 1336 aa8.63□□□□□ -1.03
CDH12-203ENST00000517378 MED14O60244 1454 aa8.62□□□□□ -1.03
CDH12-203ENST00000517378 MORC1Q86VD1 984 aa8.62□□□□□ -1.03
CDH12-203ENST00000517378 CLUAP1Q96AJ1 413 aa8.62□□□□□ -1.03
CDH12-203ENST00000517378 CFAP65Q6ZU64 1925 aaKnown RBP8.62□□□□□ -1.03
CDH12-203ENST00000517378 IGHDP01880 384 aa8.61□□□□□ -1.03
CDH12-203ENST00000517378 COL3A1P02461 1466 aaPredicted RBP8.61□□□□□ -1.03
CDH12-203ENST00000517378 RARSP54136 660 aaKnown RBP8.61□□□□□ -1.03
CDH12-203ENST00000517378 SLC12A5Q9H2X9 1139 aa8.6□□□□□ -1.03
CDH12-203ENST00000517378 TRAK1Q9UPV9 953 aa8.6□□□□□ -1.03
CDH12-203ENST00000517378 TMEM131LA2VDJ0 1609 aa8.6□□□□□ -1.03
CDH12-203ENST00000517378 ABCC11Q96J66 1382 aa8.6□□□□□ -1.03
CDH12-203ENST00000517378 USP19O94966 1318 aa8.6□□□□□ -1.03
CDH12-203ENST00000517378 PREX1Q8TCU6 1659 aa8.6□□□□□ -1.03
CDH12-203ENST00000517378 TCP11L2Q8N4U5 519 aa8.6□□□□□ -1.03
CDH12-203ENST00000517378 MYO5BQ9ULV0 1848 aa8.6□□□□□ -1.03
CDH12-203ENST00000517378 EVC2Q86UK5 1308 aa8.59□□□□□ -1.03
CDH12-203ENST00000517378 PTPRMP28827 1452 aa8.59□□□□□ -1.03
CDH12-203ENST00000517378 CDC42BPGQ6DT37 1551 aa8.59□□□□□ -1.03
CDH12-203ENST00000517378 CFAP53Q96M91 514 aa8.59□□□□□ -1.03
CDH12-203ENST00000517378 CT47B1P0C2W7 299 aaPredicted RBP8.58□□□□□ -1.04
CDH12-203ENST00000517378 RGS3P49796 1198 aa8.58□□□□□ -1.04
CDH12-203ENST00000517378 NFKBIBQ15653 356 aa8.58□□□□□ -1.04
CDH12-203ENST00000517378 KIF20BQ96Q89 1820 aa8.58□□□□□ -1.04
CDH12-203ENST00000517378 PMFBP1Q8TBY8 1022 aa8.58□□□□□ -1.04
CDH12-203ENST00000517378 VGFO15240 615 aaPredicted RBP8.58□□□□□ -1.04
CDH12-203ENST00000517378 MTHFSP49914 203 aa8.58□□□□□ -1.04
CDH12-203ENST00000517378 PANK1Q8TE04 598 aa8.58□□□□□ -1.04
CDH12-203ENST00000517378 COG6Q9Y2V7 657 aa8.58□□□□□ -1.04
CDH12-203ENST00000517378 CD163L1Q9NR16 1453 aa8.57□□□□□ -1.04
CDH12-203ENST00000517378 TMEM132EQ6IEE7 984 aa8.57□□□□□ -1.04
CDH12-203ENST00000517378 MYH16Q9H6N6 1097 aa8.57□□□□□ -1.04
CDH12-203ENST00000517378 DAXXQ9UER7 740 aaPredicted RBP8.57□□□□□ -1.04
CDH12-203ENST00000517378 A0A1W2PP64 1363 aa8.56□□□□□ -1.04
CDH12-203ENST00000517378 CHGAP10645 457 aaKnown RBP8.56□□□□□ -1.04
CDH12-203ENST00000517378 CANXP27824 592 aaKnown RBP8.56□□□□□ -1.04
CDH12-203ENST00000517378 GSE1Q14687 1217 aa8.56□□□□□ -1.04
CDH12-203ENST00000517378 ATAD2Q6PL18 1390 aa8.55□□□□□ -1.04
CDH12-203ENST00000517378 RLBP1P12271 317 aa8.55□□□□□ -1.04
CDH12-203ENST00000517378 GGT6Q6P531 493 aa8.55□□□□□ -1.04
CDH12-203ENST00000517378 SLC4A3P48751 1232 aa8.55□□□□□ -1.04
CDH12-203ENST00000517378 PLEKHF1Q96S99 279 aa8.55□□□□□ -1.04
CDH12-203ENST00000517378 RRP7AQ9Y3A4 280 aaKnown RBP8.55□□□□□ -1.04
CDH12-203ENST00000517378 NPM1P06748 294 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDH12-203ENST00000517378 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
CDH12-203ENST00000517378 IL16Q14005 1332 aa8.54□□□□□ -1.04
CDH12-203ENST00000517378 PNPLA6Q8IY17 1366 aa8.54□□□□□ -1.04
CDH12-203ENST00000517378 SETD1AO15047 1707 aaKnown RBP8.54□□□□□ -1.04
CDH12-203ENST00000517378 DLC1Q96QB1 1528 aa8.54□□□□□ -1.04
CDH12-203ENST00000517378 MVPQ14764 893 aaKnown RBP8.54□□□□□ -1.04
CDH12-203ENST00000517378 SLC52A1Q9NWF4 448 aa8.54□□□□□ -1.04
CDH12-203ENST00000517378 ARHGEF40Q8TER5 1519 aa8.54□□□□□ -1.04
CDH12-203ENST00000517378 REREQ9P2R6 1566 aa8.53□□□□□ -1.04
CDH12-203ENST00000517378 TNNT2P45379 298 aaPredicted RBP8.53□□□□□ -1.04
CDH12-203ENST00000517378 FRAT1Q92837 279 aaPredicted RBP8.53□□□□□ -1.04
CDH12-203ENST00000517378 ALKQ9UM73 1620 aa8.53□□□□□ -1.04
CDH12-203ENST00000517378 RWDD1Q9H446 243 aaPredicted RBP8.53□□□□□ -1.04
CDH12-203ENST00000517378 YTHDC2Q9H6S0 1430 aaKnown RBP8.52□□□□□ -1.04
CDH12-203ENST00000517378 SEC24BO95487 1268 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 NEUROD2Q15784 382 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 ZKSCAN2Q63HK3 967 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 TBC1D32Q96NH3 1257 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 RIMBP3CA6NJZ7 1639 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 RIMBP3BA6NNM3 1639 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 U2AF1L5P0DN76 240 aaPredicted RBP8.52□□□□□ -1.05
CDH12-203ENST00000517378 U2AF1Q01081 240 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDH12-203ENST00000517378 IDI1Q13907 227 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 PPIP5K1Q6PFW1 1433 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms