RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 POTEEQ6S8J3 1075 aa6.01□□□□□ -1.45
RNU6-840P-201ENST00000517275 CCDC9Q9Y3X0 531 aaKnown RBP6.01□□□□□ -1.45
RNU6-840P-201ENST00000517275 CFAP99D6REC4 459 aa6□□□□□ -1.45
RNU6-840P-201ENST00000517275 SRPK2P78362 688 aaKnown RBP6□□□□□ -1.45
RNU6-840P-201ENST00000517275 CTDSPL2Q05D32 466 aa6□□□□□ -1.45
RNU6-840P-201ENST00000517275 FUT2Q10981 343 aa6□□□□□ -1.45
RNU6-840P-201ENST00000517275 ALG2Q9H553 416 aa6□□□□□ -1.45
RNU6-840P-201ENST00000517275 PATL2C9JE40 543 aaKnown RBP5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 BHMG1C9JSJ3 638 aaPredicted RBP5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 TK2O00142 265 aa5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 CFHP08603 1231 aa5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 ATP6V1AP38606 617 aa5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 PSEN2P49810 448 aa5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 GUCA2AQ02747 115 aa5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 CFAP70Q5T0N1 1121 aa5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 HLA-CQ95604 372 aa5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 NBPF3Q9H094 633 aa5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 VPS9D1Q9Y2B5 631 aa5.99□□□□□ -1.45
RNU6-840P-201ENST00000517275 HDGFP51858 240 aaKnown RBP5.98□□□□□ -1.45
RNU6-840P-201ENST00000517275 RETREG3Q86VR2 466 aa5.98□□□□□ -1.45
RNU6-840P-201ENST00000517275 SEPT9Q9UHD8 586 aaPredicted RBP5.98□□□□□ -1.45
RNU6-840P-201ENST00000517275 KMT5BQ4FZB7 885 aa5.97□□□□□ -1.45
RNU6-840P-201ENST00000517275 LRRN4Q8WUT4 740 aa5.97□□□□□ -1.45
RNU6-840P-201ENST00000517275 PPP1R12CQ9BZL4 782 aa5.97□□□□□ -1.45
RNU6-840P-201ENST00000517275 SALL2Q9Y467 1007 aaPredicted RBP5.97□□□□□ -1.45
RNU6-840P-201ENST00000517275 ACTN4O43707 911 aaKnown RBP5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 Q3C1V9 767 aa5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 MORN1Q5T089 497 aa5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 HDGFL1Q5TGJ6 251 aa5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 DMRTA1Q5VZB9 504 aa5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 SAMD7Q7Z3H4 446 aa5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 ZNF687Q8N1G0 1237 aa5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 UCN2Q96RP3 112 aa5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 PRR14Q9BWN1 585 aa5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 ZC3H4Q9UPT8 1303 aaKnown RBP5.96□□□□□ -1.46
RNU6-840P-201ENST00000517275 C6orf229H3BNL8 230 aa5.95□□□□□ -1.46
RNU6-840P-201ENST00000517275 VARS2Q5ST30 1063 aaKnown RBP5.95□□□□□ -1.46
RNU6-840P-201ENST00000517275 PRR7Q8TB68 274 aa5.95□□□□□ -1.46
RNU6-840P-201ENST00000517275 OTUD5Q96G74 571 aa5.95□□□□□ -1.46
RNU6-840P-201ENST00000517275 RANGAP1P46060 587 aaPredicted RBP5.94□□□□□ -1.46
RNU6-840P-201ENST00000517275 KCNA1Q09470 495 aa5.94□□□□□ -1.46
RNU6-840P-201ENST00000517275 PNMA1Q8ND90 353 aa5.94□□□□□ -1.46
RNU6-840P-201ENST00000517275 ZFRQ96KR1 1074 aaKnown RBP5.94□□□□□ -1.46
RNU6-840P-201ENST00000517275 ERBB3P21860 1342 aa5.94□□□□□ -1.46
RNU6-840P-201ENST00000517275 ACIN1Q9UKV3 1341 aaKnown RBP5.94□□□□□ -1.46
RNU6-840P-201ENST00000517275 PALM3A6NDB9 673 aaPredicted RBP5.93□□□□□ -1.46
RNU6-840P-201ENST00000517275 ATG7O95352 703 aa5.93□□□□□ -1.46
RNU6-840P-201ENST00000517275 BRD1O95696 1058 aa5.93□□□□□ -1.46
RNU6-840P-201ENST00000517275 VAC14Q08AM6 782 aa5.93□□□□□ -1.46
RNU6-840P-201ENST00000517275 LYPD8Q6UX82 237 aa5.93□□□□□ -1.46
RNU6-840P-201ENST00000517275 F12P00748 615 aaPredicted RBP5.92□□□□□ -1.46
RNU6-840P-201ENST00000517275 NFATC2IPQ8NCF5 419 aa5.92□□□□□ -1.46
RNU6-840P-201ENST00000517275 EPS8L1Q8TE68 723 aa5.92□□□□□ -1.46
RNU6-840P-201ENST00000517275 MAFBQ9Y5Q3 323 aaPredicted RBP5.92□□□□□ -1.46
RNU6-840P-201ENST00000517275 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.91□□□□□ -1.46
RNU6-840P-201ENST00000517275 PER1O15534 1290 aaPredicted RBP5.91□□□□□ -1.46
RNU6-840P-201ENST00000517275 NR1H3Q13133 447 aa5.91□□□□□ -1.46
RNU6-840P-201ENST00000517275 NR6A1Q15406 480 aa5.91□□□□□ -1.46
RNU6-840P-201ENST00000517275 NPM2Q86SE8 214 aaKnown RBP5.91□□□□□ -1.46
RNU6-840P-201ENST00000517275 SLC27A5Q9Y2P5 690 aa5.91□□□□□ -1.46
RNU6-840P-201ENST00000517275 HRO43593 1189 aa5.9□□□□□ -1.46
RNU6-840P-201ENST00000517275 EIF4G2P78344 907 aaKnown RBP eCLIP5.9□□□□□ -1.46
RNU6-840P-201ENST00000517275 ELOAQ14241 798 aaKnown RBP5.9□□□□□ -1.46
RNU6-840P-201ENST00000517275 LRCH3Q96II8 777 aa5.9□□□□□ -1.46
RNU6-840P-201ENST00000517275 AXIN2Q9Y2T1 843 aa5.9□□□□□ -1.46
RNU6-840P-201ENST00000517275 TMEM88BA6NKF7 163 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 ATP9BO43861 1147 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 CSB-PGBD3P0DP91 1061 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 EMP3P54852 163 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 PTPRNQ16849 979 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 BRICD5Q6PL45 260 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 MRPL50Q8N5N7 158 aaKnown RBP5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 TSC1Q92574 1164 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 ZNF592Q92610 1267 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 SYMPKQ92797 1274 aaKnown RBP5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 THAP11Q96EK4 314 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 USB1Q9BQ65 265 aaKnown RBP5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 GPSM3Q9Y4H4 160 aa5.89□□□□□ -1.47
RNU6-840P-201ENST00000517275 ZBBXA8MT70 800 aa5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 ST18O60284 1047 aa5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 SEMA3FQ13275 785 aa5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 MSS51Q4VC12 460 aa5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 ADGRD1Q6QNK2 874 aa5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 RNF19BQ6ZMZ0 732 aa5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 AEBP1Q8IUX7 1158 aa5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 PLEKHM2Q8IWE5 1019 aa5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 GPKOWQ92917 476 aaPredicted RBP eCLIP5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 FKBPLQ9UIM3 349 aa5.88□□□□□ -1.47
RNU6-840P-201ENST00000517275 SOWAHBA6NEL2 793 aa5.87□□□□□ -1.47
RNU6-840P-201ENST00000517275 FBXO45P0C2W1 286 aa5.87□□□□□ -1.47
RNU6-840P-201ENST00000517275 JUNDP17535 347 aa5.87□□□□□ -1.47
RNU6-840P-201ENST00000517275 LSM11P83369 360 aaKnown RBP eCLIP5.87□□□□□ -1.47
RNU6-840P-201ENST00000517275 TMCO4Q5TGY1 634 aa5.87□□□□□ -1.47
RNU6-840P-201ENST00000517275 BLOC1S3Q6QNY0 202 aa5.87□□□□□ -1.47
RNU6-840P-201ENST00000517275 TFIP11Q9UBB9 837 aaKnown RBP5.87□□□□□ -1.47
RNU6-840P-201ENST00000517275 RNF40O75150 1001 aa5.86□□□□□ -1.47
RNU6-840P-201ENST00000517275 LMOD1P29536 600 aaPredicted RBP5.86□□□□□ -1.47
RNU6-840P-201ENST00000517275 MCCD1P59942 119 aaPredicted RBP5.86□□□□□ -1.47
RNU6-840P-201ENST00000517275 RGS22Q8NE09 1264 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms