RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 SMCPP49901 116 aaPredicted RBP6.55□□□□□ -1.36
SNORA40.15-201ENST00000516884 MINK1Q8N4C8 1332 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.15-201ENST00000516884 HAP1P54257 671 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.15-201ENST00000516884 USP46P62068 366 aa6.54□□□□□ -1.36
SNORA40.15-201ENST00000516884 FOXC1Q12948 553 aa6.54□□□□□ -1.36
SNORA40.15-201ENST00000516884 WNT7AO00755 349 aa6.53□□□□□ -1.36
SNORA40.15-201ENST00000516884 KDM4AO75164 1064 aa6.53□□□□□ -1.36
SNORA40.15-201ENST00000516884 CTC1Q2NKJ3 1217 aa6.53□□□□□ -1.36
SNORA40.15-201ENST00000516884 HOXA2O43364 376 aa6.52□□□□□ -1.37
SNORA40.15-201ENST00000516884 TRIM32Q13049 653 aa6.52□□□□□ -1.37
SNORA40.15-201ENST00000516884 USB1Q9BQ65 265 aaKnown RBP6.52□□□□□ -1.37
SNORA40.15-201ENST00000516884 MDM2Q00987 491 aaPredicted RBP6.51□□□□□ -1.37
SNORA40.15-201ENST00000516884 VSIG10Q8N0Z9 540 aa6.51□□□□□ -1.37
SNORA40.15-201ENST00000516884 CYP4X1Q8N118 509 aa6.51□□□□□ -1.37
SNORA40.15-201ENST00000516884 CCDC102AQ96A19 550 aa6.51□□□□□ -1.37
SNORA40.15-201ENST00000516884 DACH1Q9UI36 760 aa6.51□□□□□ -1.37
SNORA40.15-201ENST00000516884 SMPD1P17405 629 aa6.5□□□□□ -1.37
SNORA40.15-201ENST00000516884 HLA-CQ95604 372 aa6.5□□□□□ -1.37
SNORA40.15-201ENST00000516884 FAM217BQ9NTX9 383 aaPredicted RBP6.5□□□□□ -1.37
SNORA40.15-201ENST00000516884 ZBTB24O43167 697 aaPredicted RBP6.49□□□□□ -1.37
SNORA40.15-201ENST00000516884 GPCPD1Q9NPB8 672 aa6.49□□□□□ -1.37
SNORA40.15-201ENST00000516884 AXIN1O15169 862 aa6.48□□□□□ -1.37
SNORA40.15-201ENST00000516884 CLCN1P35523 988 aa6.48□□□□□ -1.37
SNORA40.15-201ENST00000516884 TREML4Q6UXN2 200 aa6.48□□□□□ -1.37
SNORA40.15-201ENST00000516884 SNIP1Q8TAD8 396 aaKnown RBP6.48□□□□□ -1.37
SNORA40.15-201ENST00000516884 TULP1O00294 542 aaPredicted RBP6.47□□□□□ -1.37
SNORA40.15-201ENST00000516884 MRGPRX2Q96LB1 330 aa6.47□□□□□ -1.37
SNORA40.15-201ENST00000516884 TTC24A2A3L6 582 aaPredicted RBP6.46□□□□□ -1.38
SNORA40.15-201ENST00000516884 WNT7BP56706 349 aa6.46□□□□□ -1.38
SNORA40.15-201ENST00000516884 SKOR1P84550 965 aa6.46□□□□□ -1.38
SNORA40.15-201ENST00000516884 REPIN1Q9BWE0 567 aaKnown RBP6.46□□□□□ -1.38
SNORA40.15-201ENST00000516884 GMPR2Q9P2T1 348 aaKnown RBP6.46□□□□□ -1.38
SNORA40.15-201ENST00000516884 JUNDP17535 347 aa6.45□□□□□ -1.38
SNORA40.15-201ENST00000516884 GUCA2AQ02747 115 aa6.45□□□□□ -1.38
SNORA40.15-201ENST00000516884 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.45□□□□□ -1.38
SNORA40.15-201ENST00000516884 J3QL48 77 aa6.44□□□□□ -1.38
SNORA40.15-201ENST00000516884 RETREG3Q86VR2 466 aa6.44□□□□□ -1.38
SNORA40.15-201ENST00000516884 PCDHGC3Q9UN70 934 aa6.44□□□□□ -1.38
SNORA40.15-201ENST00000516884 RC3H1Q5TC82 1133 aaKnown RBP6.43□□□□□ -1.38
SNORA40.15-201ENST00000516884 ATP13A2Q9NQ11 1180 aa6.43□□□□□ -1.38
SNORA40.15-201ENST00000516884 C11orf95C9JLR9 678 aaPredicted RBP6.42□□□□□ -1.38
SNORA40.15-201ENST00000516884 NFX1Q12986 1120 aaKnown RBP6.42□□□□□ -1.38
SNORA40.15-201ENST00000516884 SYMPKQ92797 1274 aaKnown RBP6.42□□□□□ -1.38
SNORA40.15-201ENST00000516884 SIAH2O43255 324 aa6.41□□□□□ -1.38
SNORA40.15-201ENST00000516884 AMHR2Q16671 573 aa6.41□□□□□ -1.38
SNORA40.15-201ENST00000516884 PTCRAQ6ISU1 281 aaPredicted RBP6.41□□□□□ -1.38
SNORA40.15-201ENST00000516884 BARGINQ6ZT62 677 aa6.41□□□□□ -1.38
SNORA40.15-201ENST00000516884 HPS1Q92902 700 aa6.41□□□□□ -1.38
SNORA40.15-201ENST00000516884 TRIM47Q96LD4 638 aa6.41□□□□□ -1.38
SNORA40.15-201ENST00000516884 ZMYND10O75800 440 aa6.4□□□□□ -1.38
SNORA40.15-201ENST00000516884 FDX1P10109 184 aa6.4□□□□□ -1.38
SNORA40.15-201ENST00000516884 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
SNORA40.15-201ENST00000516884 NUTM1Q86Y26 1132 aa6.4□□□□□ -1.38
SNORA40.15-201ENST00000516884 SPIRE2Q8WWL2 714 aa6.4□□□□□ -1.38
SNORA40.15-201ENST00000516884 NUDT12Q9BQG2 462 aa6.4□□□□□ -1.38
SNORA40.15-201ENST00000516884 WIPF1O43516 503 aa6.39□□□□□ -1.39
SNORA40.15-201ENST00000516884 WFS1O76024 890 aa6.39□□□□□ -1.39
SNORA40.15-201ENST00000516884 CCDC24Q8N4L8 307 aa6.39□□□□□ -1.39
SNORA40.15-201ENST00000516884 CCNYL3P0C7X3 344 aa6.38□□□□□ -1.39
SNORA40.15-201ENST00000516884 SNRPBP14678 240 aaKnown RBP6.38□□□□□ -1.39
SNORA40.15-201ENST00000516884 SSTR3P32745 418 aaPredicted RBP6.38□□□□□ -1.39
SNORA40.15-201ENST00000516884 GJA5P36382 358 aa6.38□□□□□ -1.39
SNORA40.15-201ENST00000516884 PTPRNQ16849 979 aa6.38□□□□□ -1.39
SNORA40.15-201ENST00000516884 SENP2Q9HC62 589 aa6.38□□□□□ -1.39
SNORA40.15-201ENST00000516884 MS4A1P11836 297 aa6.37□□□□□ -1.39
SNORA40.15-201ENST00000516884 DESI1Q6ICB0 168 aa6.37□□□□□ -1.39
SNORA40.15-201ENST00000516884 MOXD2PA6NHM9 499 aa6.36□□□□□ -1.39
SNORA40.15-201ENST00000516884 SH3BP2P78314 561 aa6.36□□□□□ -1.39
SNORA40.15-201ENST00000516884 MPNDQ8N594 471 aa6.36□□□□□ -1.39
SNORA40.15-201ENST00000516884 KIFC2Q96AC6 838 aa6.36□□□□□ -1.39
SNORA40.15-201ENST00000516884 EVA1BQ9NVM1 165 aa6.36□□□□□ -1.39
SNORA40.15-201ENST00000516884 NDUFV2P19404 249 aa6.35□□□□□ -1.39
SNORA40.15-201ENST00000516884 KRI1Q8N9T8 703 aaKnown RBP6.35□□□□□ -1.39
SNORA40.15-201ENST00000516884 SPDYE5A6NIY4 337 aa6.34□□□□□ -1.39
SNORA40.15-201ENST00000516884 C6orf229H3BNL8 230 aa6.34□□□□□ -1.39
SNORA40.15-201ENST00000516884 TERTO14746 1132 aaKnown RBP6.34□□□□□ -1.39
SNORA40.15-201ENST00000516884 ALDH1A1P00352 501 aa6.34□□□□□ -1.39
SNORA40.15-201ENST00000516884 GIGYF2Q6Y7W6 1299 aaKnown RBP6.34□□□□□ -1.39
SNORA40.15-201ENST00000516884 EHBP1Q8NDI1 1231 aa6.34□□□□□ -1.39
SNORA40.15-201ENST00000516884 ZC3H15Q8WU90 426 aaKnown RBP6.34□□□□□ -1.39
SNORA40.15-201ENST00000516884 KCNH2Q12809 1159 aa6.33□□□□□ -1.4
SNORA40.15-201ENST00000516884 TRIM46Q7Z4K8 759 aa6.33□□□□□ -1.4
SNORA40.15-201ENST00000516884 PRR7Q8TB68 274 aa6.33□□□□□ -1.4
SNORA40.15-201ENST00000516884 UNC93B1Q9H1C4 597 aa6.33□□□□□ -1.4
SNORA40.15-201ENST00000516884 MTMR2Q13614 643 aa6.32□□□□□ -1.4
SNORA40.15-201ENST00000516884 TTLL12Q14166 644 aaPredicted RBP6.32□□□□□ -1.4
SNORA40.15-201ENST00000516884 RSBN1LQ6PCB5 846 aaPredicted RBP6.32□□□□□ -1.4
SNORA40.15-201ENST00000516884 SPTLC1O15269 473 aa6.31□□□□□ -1.4
SNORA40.15-201ENST00000516884 PARP9Q8IXQ6 854 aa6.31□□□□□ -1.4
SNORA40.15-201ENST00000516884 ZNF511Q8NB15 262 aa6.31□□□□□ -1.4
SNORA40.15-201ENST00000516884 TBC1D2Q9BYX2 928 aa6.31□□□□□ -1.4
SNORA40.15-201ENST00000516884 STK17AQ9UEE5 414 aa6.31□□□□□ -1.4
SNORA40.15-201ENST00000516884 VARSP26640 1264 aaKnown RBP6.3□□□□□ -1.4
SNORA40.15-201ENST00000516884 LYPD8Q6UX82 237 aa6.3□□□□□ -1.4
SNORA40.15-201ENST00000516884 BAP1Q92560 729 aa6.3□□□□□ -1.4
SNORA40.15-201ENST00000516884 BEGAINQ9BUH8 593 aa6.3□□□□□ -1.4
SNORA40.15-201ENST00000516884 CAPN5O15484 640 aaPredicted RBP6.29□□□□□ -1.4
SNORA40.15-201ENST00000516884 F12P00748 615 aaPredicted RBP6.29□□□□□ -1.4
SNORA40.15-201ENST00000516884 DIXDC1Q155Q3 683 aa6.29□□□□□ -1.4
SNORA40.15-201ENST00000516884 NPAS3Q8IXF0 933 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms