RNA–Protein interactions for RNA: ENST00000515706.1

AC016550.3-201, humanhuman

BASIC

Gene AC016550.3, Length 767 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016550.3-201ENST00000515706 CYP4X1Q8N118 509 aa12.8□□□□□ -0.36
AC016550.3-201ENST00000515706 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
AC016550.3-201ENST00000515706 PRDM9Q9NQV7 894 aa12.8□□□□□ -0.36
AC016550.3-201ENST00000515706 CLCN1P35523 988 aa12.79□□□□□ -0.36
AC016550.3-201ENST00000515706 CRIPAKQ8N1N5 446 aa12.79□□□□□ -0.36
AC016550.3-201ENST00000515706 TOR4AQ9NXH8 423 aa12.79□□□□□ -0.36
AC016550.3-201ENST00000515706 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
AC016550.3-201ENST00000515706 CCDC102AQ96A19 550 aa12.77□□□□□ -0.37
AC016550.3-201ENST00000515706 AAASQ9NRG9 546 aa12.77□□□□□ -0.37
AC016550.3-201ENST00000515706 AVPP01185 164 aa12.76□□□□□ -0.37
AC016550.3-201ENST00000515706 CTC1Q2NKJ3 1217 aa12.76□□□□□ -0.37
AC016550.3-201ENST00000515706 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
AC016550.3-201ENST00000515706 ZNF775Q96BV0 537 aaPredicted RBP12.76□□□□□ -0.37
AC016550.3-201ENST00000515706 WNT7AO00755 349 aa12.73□□□□□ -0.37
AC016550.3-201ENST00000515706 HOXA2O43364 376 aa12.73□□□□□ -0.37
AC016550.3-201ENST00000515706 DXOO77932 396 aaKnown RBP12.73□□□□□ -0.37
AC016550.3-201ENST00000515706 TTC24A2A3L6 582 aaPredicted RBP12.72□□□□□ -0.37
AC016550.3-201ENST00000515706 TRIM32Q13049 653 aa12.72□□□□□ -0.37
AC016550.3-201ENST00000515706 REPIN1Q9BWE0 567 aaKnown RBP12.72□□□□□ -0.37
AC016550.3-201ENST00000515706 FAM217BQ9NTX9 383 aaPredicted RBP12.72□□□□□ -0.37
AC016550.3-201ENST00000515706 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
AC016550.3-201ENST00000515706 AXIN1O15169 862 aa12.7□□□□□ -0.38
AC016550.3-201ENST00000515706 SNIP1Q8TAD8 396 aaKnown RBP12.7□□□□□ -0.38
AC016550.3-201ENST00000515706 ST8SIA5O15466 376 aa12.69□□□□□ -0.38
AC016550.3-201ENST00000515706 SMCPP49901 116 aaPredicted RBP12.69□□□□□ -0.38
AC016550.3-201ENST00000515706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.69□□□□□ -0.38
AC016550.3-201ENST00000515706 POTECB2RU33 542 aa12.65□□□□□ -0.38
AC016550.3-201ENST00000515706 WNT7BP56706 349 aa12.65□□□□□ -0.38
AC016550.3-201ENST00000515706 CCDC24Q8N4L8 307 aa12.65□□□□□ -0.38
AC016550.3-201ENST00000515706 JUNDP17535 347 aa12.64□□□□□ -0.39
AC016550.3-201ENST00000515706 RETREG3Q86VR2 466 aa12.64□□□□□ -0.39
AC016550.3-201ENST00000515706 HLA-CQ95604 372 aa12.63□□□□□ -0.39
AC016550.3-201ENST00000515706 MRGPRX2Q96LB1 330 aa12.62□□□□□ -0.39
AC016550.3-201ENST00000515706 FDX1P10109 184 aa12.59□□□□□ -0.39
AC016550.3-201ENST00000515706 SMPD1P17405 629 aa12.59□□□□□ -0.39
AC016550.3-201ENST00000515706 SSTR3P32745 418 aaPredicted RBP12.59□□□□□ -0.39
AC016550.3-201ENST00000515706 GUCA2AQ02747 115 aa12.58□□□□□ -0.4
AC016550.3-201ENST00000515706 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
AC016550.3-201ENST00000515706 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
AC016550.3-201ENST00000515706 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
AC016550.3-201ENST00000515706 NUDT12Q9BQG2 462 aa12.57□□□□□ -0.4
AC016550.3-201ENST00000515706 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
AC016550.3-201ENST00000515706 ZMYND10O75800 440 aa12.55□□□□□ -0.4
AC016550.3-201ENST00000515706 TTLL12Q14166 644 aaPredicted RBP12.55□□□□□ -0.4
AC016550.3-201ENST00000515706 AMHR2Q16671 573 aa12.55□□□□□ -0.4
AC016550.3-201ENST00000515706 TREML4Q6UXN2 200 aa12.55□□□□□ -0.4
AC016550.3-201ENST00000515706 GMPR2Q9P2T1 348 aaKnown RBP12.55□□□□□ -0.4
AC016550.3-201ENST00000515706 DACH1Q9UI36 760 aa12.55□□□□□ -0.4
AC016550.3-201ENST00000515706 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
AC016550.3-201ENST00000515706 SYMPKQ92797 1274 aaKnown RBP12.54□□□□□ -0.4
AC016550.3-201ENST00000515706 SENP2Q9HC62 589 aa12.54□□□□□ -0.4
AC016550.3-201ENST00000515706 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
AC016550.3-201ENST00000515706 SPIRE2Q8WWL2 714 aa12.53□□□□□ -0.4
AC016550.3-201ENST00000515706 J3QL48 77 aa12.52□□□□□ -0.41
AC016550.3-201ENST00000515706 MS4A1P11836 297 aa12.52□□□□□ -0.41
AC016550.3-201ENST00000515706 SKOR1P84550 965 aa12.52□□□□□ -0.41
AC016550.3-201ENST00000515706 CCNYL3P0C7X3 344 aa12.51□□□□□ -0.41
AC016550.3-201ENST00000515706 ATP13A2Q9NQ11 1180 aa12.51□□□□□ -0.41
AC016550.3-201ENST00000515706 GJA5P36382 358 aa12.5□□□□□ -0.41
AC016550.3-201ENST00000515706 PTPRNQ16849 979 aa12.5□□□□□ -0.41
AC016550.3-201ENST00000515706 PCDHGC3Q9UN70 934 aa12.5□□□□□ -0.41
AC016550.3-201ENST00000515706 DESI1Q6ICB0 168 aa12.49□□□□□ -0.41
AC016550.3-201ENST00000515706 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
AC016550.3-201ENST00000515706 ZC3H15Q8WU90 426 aaKnown RBP12.49□□□□□ -0.41
AC016550.3-201ENST00000515706 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
AC016550.3-201ENST00000515706 GIGYF2Q6Y7W6 1299 aaKnown RBP12.48□□□□□ -0.41
AC016550.3-201ENST00000515706 MTMR2Q13614 643 aa12.47□□□□□ -0.41
AC016550.3-201ENST00000515706 HPS1Q92902 700 aa12.47□□□□□ -0.41
AC016550.3-201ENST00000515706 ALDH1A1P00352 501 aa12.46□□□□□ -0.41
AC016550.3-201ENST00000515706 EVA1BQ9NVM1 165 aa12.46□□□□□ -0.41
AC016550.3-201ENST00000515706 MOXD2PA6NHM9 499 aa12.45□□□□□ -0.42
AC016550.3-201ENST00000515706 LCE2AQ5TA79 106 aaPredicted RBP12.45□□□□□ -0.42
AC016550.3-201ENST00000515706 PTCRAQ6ISU1 281 aaPredicted RBP12.45□□□□□ -0.42
AC016550.3-201ENST00000515706 TRIM47Q96LD4 638 aa12.45□□□□□ -0.42
AC016550.3-201ENST00000515706 WFS1O76024 890 aa12.44□□□□□ -0.42
AC016550.3-201ENST00000515706 PRR7Q8TB68 274 aa12.44□□□□□ -0.42
AC016550.3-201ENST00000515706 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
AC016550.3-201ENST00000515706 WASF2Q9Y6W5 498 aa12.44□□□□□ -0.42
AC016550.3-201ENST00000515706 NDUFV2P19404 249 aa12.43□□□□□ -0.42
AC016550.3-201ENST00000515706 SIAH2O43255 324 aa12.42□□□□□ -0.42
AC016550.3-201ENST00000515706 KCNH2Q12809 1159 aa12.42□□□□□ -0.42
AC016550.3-201ENST00000515706 UNC93B1Q9H1C4 597 aa12.42□□□□□ -0.42
AC016550.3-201ENST00000515706 SH3BP2P78314 561 aa12.41□□□□□ -0.42
AC016550.3-201ENST00000515706 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
AC016550.3-201ENST00000515706 VARSP26640 1264 aaKnown RBP12.38□□□□□ -0.43
AC016550.3-201ENST00000515706 MPNDQ8N594 471 aa12.38□□□□□ -0.43
AC016550.3-201ENST00000515706 AK7Q96M32 723 aa12.38□□□□□ -0.43
AC016550.3-201ENST00000515706 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
AC016550.3-201ENST00000515706 NFX1Q12986 1120 aaKnown RBP12.37□□□□□ -0.43
AC016550.3-201ENST00000515706 RSBN1LQ6PCB5 846 aaPredicted RBP12.37□□□□□ -0.43
AC016550.3-201ENST00000515706 SNRPBP14678 240 aaKnown RBP12.36□□□□□ -0.43
AC016550.3-201ENST00000515706 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
AC016550.3-201ENST00000515706 CAPN5O15484 640 aaPredicted RBP12.35□□□□□ -0.43
AC016550.3-201ENST00000515706 PRPF38BQ5VTL8 546 aaKnown RBP12.35□□□□□ -0.43
AC016550.3-201ENST00000515706 ZNF511Q8NB15 262 aa12.35□□□□□ -0.43
AC016550.3-201ENST00000515706 BAP1Q92560 729 aa12.35□□□□□ -0.43
AC016550.3-201ENST00000515706 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
AC016550.3-201ENST00000515706 TRIM66O15016 1216 aa12.34□□□□□ -0.43
AC016550.3-201ENST00000515706 SPTLC1O15269 473 aa12.34□□□□□ -0.43
AC016550.3-201ENST00000515706 LYPD8Q6UX82 237 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms