RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 DLC1Q96QB1 1528 aa22.77■■□□□ 1.24
SDHAP3-202ENST00000515467 PLEKHH1Q9ULM0 1364 aa22.76■■□□□ 1.23
SDHAP3-202ENST00000515467 MED1Q15648 1581 aaPredicted RBP22.76■■□□□ 1.23
SDHAP3-202ENST00000515467 KNDC1Q76NI1 1749 aa22.76■■□□□ 1.23
SDHAP3-202ENST00000515467 CCER1Q8TC90 406 aaPredicted RBP22.75■■□□□ 1.23
SDHAP3-202ENST00000515467 TIMELESSQ9UNS1 1208 aa22.75■■□□□ 1.23
SDHAP3-202ENST00000515467 MST1RQ04912 1400 aa22.74■■□□□ 1.23
SDHAP3-202ENST00000515467 KIAA1210Q9ULL0 1709 aa22.74■■□□□ 1.23
SDHAP3-202ENST00000515467 SAFB2Q14151 953 aaKnown RBP eCLIP22.73■■□□□ 1.23
SDHAP3-202ENST00000515467 BRINP3Q76B58 766 aa22.73■■□□□ 1.23
SDHAP3-202ENST00000515467 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
SDHAP3-202ENST00000515467 NALCNQ8IZF0 1738 aa22.71■■□□□ 1.23
SDHAP3-202ENST00000515467 NBPF8Q3BBV2 869 aa22.7■■□□□ 1.22
SDHAP3-202ENST00000515467 C1orf167Q5SNV9 1468 aa22.7■■□□□ 1.22
SDHAP3-202ENST00000515467 ROBO1Q9Y6N7 1651 aa22.69■■□□□ 1.22
SDHAP3-202ENST00000515467 ROCK2O75116 1388 aaKnown RBP22.68■■□□□ 1.22
SDHAP3-202ENST00000515467 CDC42BPGQ6DT37 1551 aa22.67■■□□□ 1.22
SDHAP3-202ENST00000515467 ESCO1Q5FWF5 840 aa22.66■■□□□ 1.22
SDHAP3-202ENST00000515467 MINK1Q8N4C8 1332 aaPredicted RBP22.65■■□□□ 1.22
SDHAP3-202ENST00000515467 ORAI2Q96SN7 254 aa22.65■■□□□ 1.22
SDHAP3-202ENST00000515467 NUTM2FA1L443 756 aa22.63■■□□□ 1.21
SDHAP3-202ENST00000515467 WASLO00401 505 aaPredicted RBP22.63■■□□□ 1.21
SDHAP3-202ENST00000515467 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
SDHAP3-202ENST00000515467 EIF3AQ14152 1382 aaKnown RBP22.63■■□□□ 1.21
SDHAP3-202ENST00000515467 CENPJQ9HC77 1338 aaPredicted RBP22.62■■□□□ 1.21
SDHAP3-202ENST00000515467 CARD11Q9BXL7 1154 aa22.62■■□□□ 1.21
SDHAP3-202ENST00000515467 GPRASP1Q5JY77 1395 aa22.62■■□□□ 1.21
SDHAP3-202ENST00000515467 TRPM1Q7Z4N2 1603 aa22.6■■□□□ 1.21
SDHAP3-202ENST00000515467 LRRC59Q96AG4 307 aaKnown RBP22.59■■□□□ 1.21
SDHAP3-202ENST00000515467 AHDC1Q5TGY3 1603 aaPredicted RBP22.59■■□□□ 1.21
SDHAP3-202ENST00000515467 NPHP3Q7Z494 1330 aa22.57■■□□□ 1.2
SDHAP3-202ENST00000515467 ANKARQ7Z5J8 1434 aa22.57■■□□□ 1.2
SDHAP3-202ENST00000515467 JCADQ9P266 1359 aa22.57■■□□□ 1.2
SDHAP3-202ENST00000515467 ADGRB2O60241 1585 aa22.56■■□□□ 1.2
SDHAP3-202ENST00000515467 RALGAPBQ86X10 1494 aa22.56■■□□□ 1.2
SDHAP3-202ENST00000515467 CDK19Q9BWU1 502 aa22.56■■□□□ 1.2
SDHAP3-202ENST00000515467 PHF8Q9UPP1 1060 aa22.56■■□□□ 1.2
SDHAP3-202ENST00000515467 PHLPP1O60346 1717 aa22.55■■□□□ 1.2
SDHAP3-202ENST00000515467 ARHGEF28Q8N1W1 1705 aaKnown RBP22.55■■□□□ 1.2
SDHAP3-202ENST00000515467 FOXO3O43524 673 aa22.55■■□□□ 1.2
SDHAP3-202ENST00000515467 DDX17Q92841 729 aaKnown RBP22.55■■□□□ 1.2
SDHAP3-202ENST00000515467 SOS2Q07890 1332 aaPredicted RBP22.54■■□□□ 1.2
SDHAP3-202ENST00000515467 FMN2Q9NZ56 1722 aa22.54■■□□□ 1.2
SDHAP3-202ENST00000515467 NUDT16Q96DE0 195 aaKnown RBP22.52■■□□□ 1.2
SDHAP3-202ENST00000515467 COL16A1Q07092 1604 aaPredicted RBP22.5■■□□□ 1.19
SDHAP3-202ENST00000515467 PSME1Q06323 249 aa22.5■■□□□ 1.19
SDHAP3-202ENST00000515467 TULP4Q9NRJ4 1543 aa22.5■■□□□ 1.19
SDHAP3-202ENST00000515467 SPATA31A6Q5VVP1 1343 aa22.5■■□□□ 1.19
SDHAP3-202ENST00000515467 EVC2Q86UK5 1308 aa22.5■■□□□ 1.19
SDHAP3-202ENST00000515467 SRPK2P78362 688 aaKnown RBP22.49■■□□□ 1.19
SDHAP3-202ENST00000515467 CCDC61Q9Y6R9 512 aa22.49■■□□□ 1.19
SDHAP3-202ENST00000515467 PRR36Q9H6K5 1346 aa22.49■■□□□ 1.19
SDHAP3-202ENST00000515467 SLC24A1O60721 1099 aa22.48■■□□□ 1.19
SDHAP3-202ENST00000515467 KRT28Q7Z3Y7 464 aa22.48■■□□□ 1.19
SDHAP3-202ENST00000515467 NHSL1Q5SYE7 1610 aa22.48■■□□□ 1.19
SDHAP3-202ENST00000515467 PMFBP1Q8TBY8 1022 aa22.47■■□□□ 1.19
SDHAP3-202ENST00000515467 NGDNQ8NEJ9 315 aaKnown RBP22.45■■□□□ 1.18
SDHAP3-202ENST00000515467 XPCQ01831 940 aaPredicted RBP22.44■■□□□ 1.18
SDHAP3-202ENST00000515467 KIF1AQ12756 1690 aa22.44■■□□□ 1.18
SDHAP3-202ENST00000515467 CABP2Q9NPB3 220 aa22.44■■□□□ 1.18
SDHAP3-202ENST00000515467 SBNO2Q9Y2G9 1366 aa22.44■■□□□ 1.18
SDHAP3-202ENST00000515467 PLEKHG3A1L390 1219 aa22.43■■□□□ 1.18
SDHAP3-202ENST00000515467 PXDNQ92626 1479 aa22.42■■□□□ 1.18
SDHAP3-202ENST00000515467 ATP7BP35670 1465 aa22.41■■□□□ 1.18
SDHAP3-202ENST00000515467 PNPLA6Q8IY17 1366 aa22.41■■□□□ 1.18
SDHAP3-202ENST00000515467 SPATA31A3Q5VYP0 1347 aa22.4■■□□□ 1.18
SDHAP3-202ENST00000515467 USP32Q8NFA0 1604 aa22.4■■□□□ 1.18
SDHAP3-202ENST00000515467 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
SDHAP3-202ENST00000515467 QRICH2Q9H0J4 1663 aa22.39■■□□□ 1.18
SDHAP3-202ENST00000515467 SBNO1A3KN83 1393 aa22.39■■□□□ 1.18
SDHAP3-202ENST00000515467 NUTM2BA6NNL0 878 aaPredicted RBP22.38■■□□□ 1.17
SDHAP3-202ENST00000515467 NUTM2EB1AL46 878 aaPredicted RBP22.38■■□□□ 1.17
SDHAP3-202ENST00000515467 MEX3CQ5U5Q3 659 aaKnown RBP22.38■■□□□ 1.17
SDHAP3-202ENST00000515467 NUTM2AQ8IVF1 878 aaPredicted RBP22.38■■□□□ 1.17
SDHAP3-202ENST00000515467 SHPRHQ149N8 1683 aa22.37■■□□□ 1.17
SDHAP3-202ENST00000515467 PUS7Q96PZ0 661 aaKnown RBP22.37■■□□□ 1.17
SDHAP3-202ENST00000515467 USP47Q96K76 1375 aa22.37■■□□□ 1.17
SDHAP3-202ENST00000515467 ACEP12821 1306 aa22.36■■□□□ 1.17
SDHAP3-202ENST00000515467 RGPD8O14715 1765 aaPredicted RBP22.36■■□□□ 1.17
SDHAP3-202ENST00000515467 CABP1Q9NZU7 370 aa22.36■■□□□ 1.17
SDHAP3-202ENST00000515467 ATAD2Q6PL18 1390 aa22.36■■□□□ 1.17
SDHAP3-202ENST00000515467 TESK2Q96S53 571 aa22.35■■□□□ 1.17
SDHAP3-202ENST00000515467 POLR3AO14802 1390 aaPredicted RBP22.35■■□□□ 1.17
SDHAP3-202ENST00000515467 PPIP5K1Q6PFW1 1433 aa22.34■■□□□ 1.17
SDHAP3-202ENST00000515467 LMOD2Q6P5Q4 547 aa22.34■■□□□ 1.17
SDHAP3-202ENST00000515467 RGS17Q9UGC6 210 aaPredicted RBP22.34■■□□□ 1.17
SDHAP3-202ENST00000515467 ARHGEF10O15013 1369 aa22.34■■□□□ 1.17
SDHAP3-202ENST00000515467 TNS3Q68CZ2 1445 aa22.33■■□□□ 1.17
SDHAP3-202ENST00000515467 PAK3O75914 559 aaPredicted RBP22.32■■□□□ 1.16
SDHAP3-202ENST00000515467 TMF1P82094 1093 aa22.31■■□□□ 1.16
SDHAP3-202ENST00000515467 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
SDHAP3-202ENST00000515467 ITSN1Q15811 1721 aa22.31■■□□□ 1.16
SDHAP3-202ENST00000515467 BRD4O60885 1362 aaPredicted RBP22.3■■□□□ 1.16
SDHAP3-202ENST00000515467 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
SDHAP3-202ENST00000515467 LRP6O75581 1613 aa22.28■■□□□ 1.16
SDHAP3-202ENST00000515467 EIF4G2P78344 907 aaKnown RBP eCLIP22.28■■□□□ 1.16
SDHAP3-202ENST00000515467 ADAMTS2O95450 1211 aa22.27■■□□□ 1.16
SDHAP3-202ENST00000515467 HAP1P54257 671 aaPredicted RBP22.27■■□□□ 1.16
SDHAP3-202ENST00000515467 TOPAZ1Q8N9V7 1692 aa22.26■■□□□ 1.15
SDHAP3-202ENST00000515467 COL22A1Q8NFW1 1626 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms