RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 NUTM2FA1L443 756 aa19.06■□□□□ 0.64
CDK7-213ENST00000515391 RGS17Q9UGC6 210 aaPredicted RBP19.06■□□□□ 0.64
CDK7-213ENST00000515391 LAMC1P11047 1609 aa19.06■□□□□ 0.64
CDK7-213ENST00000515391 NHSL1Q5SYE7 1610 aa19.04■□□□□ 0.64
CDK7-213ENST00000515391 SAFB2Q14151 953 aaKnown RBP eCLIP19.04■□□□□ 0.64
CDK7-213ENST00000515391 CDC42BPGQ6DT37 1551 aa19.02■□□□□ 0.64
CDK7-213ENST00000515391 PRAM1Q96QH2 718 aa19.02■□□□□ 0.64
CDK7-213ENST00000515391 ADGRB1O14514 1584 aa19.02■□□□□ 0.63
CDK7-213ENST00000515391 ESCO1Q5FWF5 840 aa19.01■□□□□ 0.63
CDK7-213ENST00000515391 SIRT1Q96EB6 747 aa19.01■□□□□ 0.63
CDK7-213ENST00000515391 TRAK1Q9UPV9 953 aa19.01■□□□□ 0.63
CDK7-213ENST00000515391 LRP6O75581 1613 aa19■□□□□ 0.63
CDK7-213ENST00000515391 NUTM2BA6NNL0 878 aaPredicted RBP19■□□□□ 0.63
CDK7-213ENST00000515391 NUTM2EB1AL46 878 aaPredicted RBP19■□□□□ 0.63
CDK7-213ENST00000515391 NUTM2AQ8IVF1 878 aaPredicted RBP19■□□□□ 0.63
CDK7-213ENST00000515391 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
CDK7-213ENST00000515391 SHPRHQ149N8 1683 aa18.99■□□□□ 0.63
CDK7-213ENST00000515391 SOCS7O14512 581 aa18.99■□□□□ 0.63
CDK7-213ENST00000515391 LRRC59Q96AG4 307 aaKnown RBP18.99■□□□□ 0.63
CDK7-213ENST00000515391 SPATA31A6Q5VVP1 1343 aa18.99■□□□□ 0.63
CDK7-213ENST00000515391 STAC3Q96MF2 364 aa18.98■□□□□ 0.63
CDK7-213ENST00000515391 POGKQ9P215 609 aa18.98■□□□□ 0.63
CDK7-213ENST00000515391 POTEAQ6S8J7 498 aa18.97■□□□□ 0.63
CDK7-213ENST00000515391 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
CDK7-213ENST00000515391 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
CDK7-213ENST00000515391 MEX3CQ5U5Q3 659 aaKnown RBP18.96■□□□□ 0.63
CDK7-213ENST00000515391 SOS2Q07890 1332 aaPredicted RBP18.96■□□□□ 0.63
CDK7-213ENST00000515391 DLC1Q96QB1 1528 aa18.95■□□□□ 0.62
CDK7-213ENST00000515391 FOXO3O43524 673 aa18.95■□□□□ 0.62
CDK7-213ENST00000515391 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
CDK7-213ENST00000515391 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
CDK7-213ENST00000515391 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
CDK7-213ENST00000515391 HIRIP3Q9BW71 556 aaPredicted RBP18.94■□□□□ 0.62
CDK7-213ENST00000515391 MINK1Q8N4C8 1332 aaPredicted RBP18.93■□□□□ 0.62
CDK7-213ENST00000515391 RGPD8O14715 1765 aaPredicted RBP18.93■□□□□ 0.62
CDK7-213ENST00000515391 NBPF1Q3BBV0 1214 aa18.92■□□□□ 0.62
CDK7-213ENST00000515391 L3MBTL2Q969R5 705 aa18.92■□□□□ 0.62
CDK7-213ENST00000515391 NPHP3Q7Z494 1330 aa18.91■□□□□ 0.62
CDK7-213ENST00000515391 PXDNQ92626 1479 aa18.89■□□□□ 0.61
CDK7-213ENST00000515391 ARHGEF28Q8N1W1 1705 aaKnown RBP18.88■□□□□ 0.61
CDK7-213ENST00000515391 ADAMTS2O95450 1211 aa18.87■□□□□ 0.61
CDK7-213ENST00000515391 PHF8Q9UPP1 1060 aa18.87■□□□□ 0.61
CDK7-213ENST00000515391 USP32Q8NFA0 1604 aa18.86■□□□□ 0.61
CDK7-213ENST00000515391 KRT28Q7Z3Y7 464 aa18.86■□□□□ 0.61
CDK7-213ENST00000515391 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
CDK7-213ENST00000515391 KIAA1210Q9ULL0 1709 aa18.86■□□□□ 0.61
CDK7-213ENST00000515391 ADGRB2O60241 1585 aa18.85■□□□□ 0.61
CDK7-213ENST00000515391 PRR36Q9H6K5 1346 aa18.85■□□□□ 0.61
CDK7-213ENST00000515391 C8orf37Q96NL8 207 aa18.85■□□□□ 0.61
CDK7-213ENST00000515391 WASLO00401 505 aaPredicted RBP18.84■□□□□ 0.61
CDK7-213ENST00000515391 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
CDK7-213ENST00000515391 AFF2P51816 1311 aa18.83■□□□□ 0.61
CDK7-213ENST00000515391 ZNF772Q68DY9 489 aaPredicted RBP18.82■□□□□ 0.6
CDK7-213ENST00000515391 ANKARQ7Z5J8 1434 aa18.81■□□□□ 0.6
CDK7-213ENST00000515391 COL22A1Q8NFW1 1626 aaPredicted RBP18.81■□□□□ 0.6
CDK7-213ENST00000515391 SPATA31A3Q5VYP0 1347 aa18.8■□□□□ 0.6
CDK7-213ENST00000515391 PLEKHG5O94827 1062 aa18.8■□□□□ 0.6
CDK7-213ENST00000515391 NGLY1Q96IV0 654 aa18.8■□□□□ 0.6
CDK7-213ENST00000515391 PSME1Q06323 249 aa18.79■□□□□ 0.6
CDK7-213ENST00000515391 CDK19Q9BWU1 502 aa18.79■□□□□ 0.6
CDK7-213ENST00000515391 TULP4Q9NRJ4 1543 aa18.79■□□□□ 0.6
CDK7-213ENST00000515391 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
CDK7-213ENST00000515391 NUDT16Q96DE0 195 aaKnown RBP18.77■□□□□ 0.6
CDK7-213ENST00000515391 TRPM1Q7Z4N2 1603 aa18.76■□□□□ 0.59
CDK7-213ENST00000515391 LMOD2Q6P5Q4 547 aa18.76■□□□□ 0.59
CDK7-213ENST00000515391 EIF3AQ14152 1382 aaKnown RBP18.76■□□□□ 0.59
CDK7-213ENST00000515391 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
CDK7-213ENST00000515391 CENPJQ9HC77 1338 aaPredicted RBP18.74■□□□□ 0.59
CDK7-213ENST00000515391 TNS3Q68CZ2 1445 aa18.74■□□□□ 0.59
CDK7-213ENST00000515391 ATP7BP35670 1465 aa18.74■□□□□ 0.59
CDK7-213ENST00000515391 RXRBP28702 533 aa18.74■□□□□ 0.59
CDK7-213ENST00000515391 QTRT2Q9H974 415 aaKnown RBP18.74■□□□□ 0.59
CDK7-213ENST00000515391 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
CDK7-213ENST00000515391 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
CDK7-213ENST00000515391 USP21Q9UK80 565 aa18.73■□□□□ 0.59
CDK7-213ENST00000515391 ROCK2O75116 1388 aaKnown RBP18.72■□□□□ 0.59
CDK7-213ENST00000515391 TONSLQ96HA7 1378 aa18.71■□□□□ 0.59
CDK7-213ENST00000515391 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
CDK7-213ENST00000515391 GPRASP1Q5JY77 1395 aa18.7■□□□□ 0.58
CDK7-213ENST00000515391 QRICH2Q9H0J4 1663 aa18.7■□□□□ 0.58
CDK7-213ENST00000515391 HAP1P54257 671 aaPredicted RBP18.7■□□□□ 0.58
CDK7-213ENST00000515391 FNBP4Q8N3X1 1017 aaPredicted RBP18.7■□□□□ 0.58
CDK7-213ENST00000515391 CABP2Q9NPB3 220 aa18.7■□□□□ 0.58
CDK7-213ENST00000515391 MARF1Q9Y4F3 1742 aaKnown RBP18.7■□□□□ 0.58
CDK7-213ENST00000515391 SRPK2P78362 688 aaKnown RBP18.69■□□□□ 0.58
CDK7-213ENST00000515391 ITSN1Q15811 1721 aa18.69■□□□□ 0.58
CDK7-213ENST00000515391 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
CDK7-213ENST00000515391 CCDC61Q9Y6R9 512 aa18.68■□□□□ 0.58
CDK7-213ENST00000515391 RBM6P78332 1123 aaKnown RBP18.67■□□□□ 0.58
CDK7-213ENST00000515391 ACEP12821 1306 aa18.67■□□□□ 0.58
CDK7-213ENST00000515391 ARHGEF10O15013 1369 aa18.67■□□□□ 0.58
CDK7-213ENST00000515391 TOPAZ1Q8N9V7 1692 aa18.66■□□□□ 0.58
CDK7-213ENST00000515391 PCGF6Q9BYE7 350 aa18.66■□□□□ 0.58
CDK7-213ENST00000515391 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
CDK7-213ENST00000515391 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
CDK7-213ENST00000515391 KCNA4P22459 653 aa18.65■□□□□ 0.58
CDK7-213ENST00000515391 TRPC5Q9UL62 973 aaPredicted RBP18.65■□□□□ 0.58
CDK7-213ENST00000515391 ABCA3Q99758 1704 aa18.65■□□□□ 0.58
CDK7-213ENST00000515391 PLEKHG3A1L390 1219 aa18.64■□□□□ 0.57
CDK7-213ENST00000515391 NUTM2GQ5VZR2 741 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms