RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 CABP4P57796 275 aa17.7■□□□□ 0.42
TRIO-222ENST00000515144 BICDL1Q6ZP65 573 aa17.7■□□□□ 0.42
TRIO-222ENST00000515144 KRI1Q8N9T8 703 aaKnown RBP17.69■□□□□ 0.42
TRIO-222ENST00000515144 CCAR1Q8IX12 1150 aaKnown RBP17.69■□□□□ 0.42
TRIO-222ENST00000515144 TPM4P67936 248 aa17.69■□□□□ 0.42
TRIO-222ENST00000515144 MTHFSP49914 203 aa17.69■□□□□ 0.42
TRIO-222ENST00000515144 ST18O60284 1047 aa17.68■□□□□ 0.42
TRIO-222ENST00000515144 WASHC4Q2M389 1173 aa17.68■□□□□ 0.42
TRIO-222ENST00000515144 E9PSI1 815 aa17.68■□□□□ 0.42
TRIO-222ENST00000515144 TSPOAP1O95153 1857 aa17.68■□□□□ 0.42
TRIO-222ENST00000515144 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
TRIO-222ENST00000515144 RRBP1Q9P2E9 1410 aaKnown RBP17.67■□□□□ 0.42
TRIO-222ENST00000515144 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
TRIO-222ENST00000515144 ATP2B2Q01814 1243 aa17.67■□□□□ 0.42
TRIO-222ENST00000515144 NCAPD3P42695 1498 aa17.67■□□□□ 0.42
TRIO-222ENST00000515144 RBM5P52756 815 aaKnown RBP eCLIP17.67■□□□□ 0.424e-11■■□□□ 12.4
TRIO-222ENST00000515144 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
TRIO-222ENST00000515144 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
TRIO-222ENST00000515144 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
TRIO-222ENST00000515144 PRDM11Q9NQV5 511 aa17.66■□□□□ 0.42
TRIO-222ENST00000515144 RUNDC1Q96C34 613 aa17.66■□□□□ 0.42
TRIO-222ENST00000515144 CABP1Q9NZU7 370 aa17.65■□□□□ 0.42
TRIO-222ENST00000515144 ERICH2A1L162 156 aa17.65■□□□□ 0.42
TRIO-222ENST00000515144 LRRFIP1Q32MZ4 808 aaKnown RBP17.65■□□□□ 0.42
TRIO-222ENST00000515144 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
TRIO-222ENST00000515144 TRDNQ13061 729 aa17.65■□□□□ 0.42
TRIO-222ENST00000515144 C9orf84Q5VXU9 1444 aa17.64■□□□□ 0.42
TRIO-222ENST00000515144 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
TRIO-222ENST00000515144 POLA1P09884 1462 aaPredicted RBP17.64■□□□□ 0.41
TRIO-222ENST00000515144 CHMP4CQ96CF2 233 aa17.64■□□□□ 0.41
TRIO-222ENST00000515144 FYCO1Q9BQS8 1478 aa17.64■□□□□ 0.41
TRIO-222ENST00000515144 TRIM29Q14134 588 aa17.63■□□□□ 0.41
TRIO-222ENST00000515144 CCDC43Q96MW1 224 aaKnown RBP17.63■□□□□ 0.41
TRIO-222ENST00000515144 CEP89Q96ST8 783 aa17.62■□□□□ 0.41
TRIO-222ENST00000515144 CNNM1Q9NRU3 951 aa17.62■□□□□ 0.41
TRIO-222ENST00000515144 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
TRIO-222ENST00000515144 SLC12A5Q9H2X9 1139 aa17.62■□□□□ 0.41
TRIO-222ENST00000515144 NBPF1Q3BBV0 1214 aa17.61■□□□□ 0.41
TRIO-222ENST00000515144 PLEKHO1Q53GL0 409 aaPredicted RBP17.61■□□□□ 0.41
TRIO-222ENST00000515144 EXOC6Q8TAG9 804 aa17.61■□□□□ 0.41
TRIO-222ENST00000515144 ARHGEF11O15085 1522 aa17.61■□□□□ 0.41
TRIO-222ENST00000515144 ERBINQ96RT1 1412 aa17.61■□□□□ 0.41
TRIO-222ENST00000515144 SULT6B1Q6IMI4 303 aa17.61■□□□□ 0.41
TRIO-222ENST00000515144 POGZQ7Z3K3 1410 aa17.61■□□□□ 0.41
TRIO-222ENST00000515144 RBM19Q9Y4C8 960 aaKnown RBP17.61■□□□□ 0.41
TRIO-222ENST00000515144 A0A0U1RQG5 324 aaPredicted RBP17.61■□□□□ 0.41
TRIO-222ENST00000515144 SYAP1Q96A49 352 aaPredicted RBP17.61■□□□□ 0.41
TRIO-222ENST00000515144 SIL1Q9H173 461 aa17.6■□□□□ 0.41
TRIO-222ENST00000515144 DNAJC2Q99543 621 aaKnown RBP17.6■□□□□ 0.41
TRIO-222ENST00000515144 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
TRIO-222ENST00000515144 CPLX1O14810 134 aa17.6■□□□□ 0.41
TRIO-222ENST00000515144 WAPLQ7Z5K2 1190 aa17.6■□□□□ 0.41
TRIO-222ENST00000515144 CCDC85AQ96PX6 553 aaPredicted RBP17.6■□□□□ 0.41
TRIO-222ENST00000515144 RRP12Q5JTH9 1297 aaKnown RBP17.59■□□□□ 0.41
TRIO-222ENST00000515144 UBTFL1P0CB47 393 aaPredicted RBP17.59■□□□□ 0.41
TRIO-222ENST00000515144 C1orf115Q9H7X2 142 aa17.59■□□□□ 0.41
TRIO-222ENST00000515144 LNPKQ9C0E8 428 aa17.59■□□□□ 0.41
TRIO-222ENST00000515144 PRKRIP1Q9H875 184 aaPredicted RBP17.58■□□□□ 0.41
TRIO-222ENST00000515144 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
TRIO-222ENST00000515144 CSPP1Q1MSJ5 1256 aa17.58■□□□□ 0.4
TRIO-222ENST00000515144 PCMTD1Q96MG8 357 aaPredicted RBP17.58■□□□□ 0.4
TRIO-222ENST00000515144 CASKIN1Q8WXD9 1431 aa17.58■□□□□ 0.4
TRIO-222ENST00000515144 KIF14Q15058 1648 aa17.58■□□□□ 0.4
TRIO-222ENST00000515144 DZIP1LQ8IYY4 767 aaKnown RBP17.58■□□□□ 0.4
TRIO-222ENST00000515144 KIF3AQ9Y496 699 aa17.58■□□□□ 0.4
TRIO-222ENST00000515144 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
TRIO-222ENST00000515144 IQGAP2Q13576 1575 aa17.57■□□□□ 0.4
TRIO-222ENST00000515144 RUFY2Q8WXA3 655 aa17.57■□□□□ 0.4
TRIO-222ENST00000515144 GNAI1P63096 354 aa17.56■□□□□ 0.4
TRIO-222ENST00000515144 NGLY1Q96IV0 654 aa17.56■□□□□ 0.4
TRIO-222ENST00000515144 RTEL1-TNFRSF6BF6WH68 1400 aa17.56■□□□□ 0.4
TRIO-222ENST00000515144 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
TRIO-222ENST00000515144 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
TRIO-222ENST00000515144 IBSPP21815 317 aaPredicted RBP17.55■□□□□ 0.4
TRIO-222ENST00000515144 ERICH3Q5RHP9 1530 aa17.54■□□□□ 0.4
TRIO-222ENST00000515144 MAP4K4O95819 1239 aaPredicted RBP17.54■□□□□ 0.4
TRIO-222ENST00000515144 RRP1P56182 461 aaKnown RBP17.54■□□□□ 0.4
TRIO-222ENST00000515144 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
TRIO-222ENST00000515144 DDX19BQ9UMR2 479 aa17.54■□□□□ 0.4
TRIO-222ENST00000515144 EHBP1L1Q8N3D4 1523 aa17.54■□□□□ 0.4
TRIO-222ENST00000515144 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
TRIO-222ENST00000515144 ZNF530Q6P9A1 599 aaPredicted RBP17.54■□□□□ 0.4
TRIO-222ENST00000515144 EPRSP07814 1512 aaKnown RBP17.54■□□□□ 0.4
TRIO-222ENST00000515144 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
TRIO-222ENST00000515144 USHBP1Q8N6Y0 703 aa17.54■□□□□ 0.4
TRIO-222ENST00000515144 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
TRIO-222ENST00000515144 ZKSCAN1P17029 563 aaPredicted RBP17.53■□□□□ 0.4
TRIO-222ENST00000515144 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
TRIO-222ENST00000515144 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
TRIO-222ENST00000515144 BTBD11A6QL63 1104 aa17.53■□□□□ 0.4
TRIO-222ENST00000515144 MIS18AQ9NYP9 233 aa17.52■□□□□ 0.4
TRIO-222ENST00000515144 TMEM132AQ24JP5 1023 aa17.52■□□□□ 0.4
TRIO-222ENST00000515144 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
TRIO-222ENST00000515144 TTC39AQ5SRH9 613 aa17.52■□□□□ 0.4
TRIO-222ENST00000515144 GAS2L2Q8NHY3 880 aa17.52■□□□□ 0.4
TRIO-222ENST00000515144 PAXIP1Q6ZW49 1069 aaPredicted RBP17.52■□□□□ 0.39
TRIO-222ENST00000515144 KIF7Q2M1P5 1343 aa17.51■□□□□ 0.39
TRIO-222ENST00000515144 RALYLQ86SE5 291 aaKnown RBP17.51■□□□□ 0.39
TRIO-222ENST00000515144 MPRIPQ6WCQ1 1025 aa17.51■□□□□ 0.39
TRIO-222ENST00000515144 API5Q9BZZ5 524 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms