RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 PPARGC1BQ86YN6 1023 aaKnown RBP9.05□□□□□ -0.96
GYPB-213ENST00000513128 NRXN3Q9Y4C0 1643 aa9.05□□□□□ -0.96
GYPB-213ENST00000513128 ROCK1Q13464 1354 aa9.04□□□□□ -0.96
GYPB-213ENST00000513128 ITGAEP38570 1179 aa9.04□□□□□ -0.96
GYPB-213ENST00000513128 TBX22Q9Y458 520 aa9.04□□□□□ -0.96
GYPB-213ENST00000513128 PTPRUQ92729 1446 aa9.04□□□□□ -0.96
GYPB-213ENST00000513128 SPHKAPQ2M3C7 1700 aa9.03□□□□□ -0.96
GYPB-213ENST00000513128 NUP155O75694 1391 aa9.03□□□□□ -0.96
GYPB-213ENST00000513128 DIP2AQ14689 1571 aa9.03□□□□□ -0.96
GYPB-213ENST00000513128 LRP6O75581 1613 aa9.02□□□□□ -0.96
GYPB-213ENST00000513128 XRN1Q8IZH2 1706 aaKnown RBP9.02□□□□□ -0.97
GYPB-213ENST00000513128 HDGFP51858 240 aaKnown RBP9.01□□□□□ -0.97
GYPB-213ENST00000513128 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.01□□□□□ -0.97
GYPB-213ENST00000513128 TRPM2O94759 1503 aa9□□□□□ -0.97
GYPB-213ENST00000513128 JCADQ9P266 1359 aa9□□□□□ -0.97
GYPB-213ENST00000513128 NCOA3Q9Y6Q9 1424 aa9□□□□□ -0.97
GYPB-213ENST00000513128 SPDYE2BA6NHP3 402 aa9□□□□□ -0.97
GYPB-213ENST00000513128 SPDYE6P0CI01 402 aa9□□□□□ -0.97
GYPB-213ENST00000513128 SPDYE2Q495Y8 402 aa9□□□□□ -0.97
GYPB-213ENST00000513128 ZBTB47Q9UFB7 747 aaPredicted RBP9□□□□□ -0.97
GYPB-213ENST00000513128 AMOTL2Q9Y2J4 779 aa9□□□□□ -0.97
GYPB-213ENST00000513128 CLTCL1P53675 1640 aa9□□□□□ -0.97
GYPB-213ENST00000513128 AHDC1Q5TGY3 1603 aaPredicted RBP9□□□□□ -0.97
GYPB-213ENST00000513128 SHPRHQ149N8 1683 aa9□□□□□ -0.97
GYPB-213ENST00000513128 PIK3R4Q99570 1358 aa8.99□□□□□ -0.97
GYPB-213ENST00000513128 SETBP1Q9Y6X0 1596 aa8.99□□□□□ -0.97
GYPB-213ENST00000513128 C19orf44Q9H6X5 657 aa8.99□□□□□ -0.97
GYPB-213ENST00000513128 METP08581 1390 aa8.99□□□□□ -0.97
GYPB-213ENST00000513128 NEXMIFQ5QGS0 1516 aa8.98□□□□□ -0.97
GYPB-213ENST00000513128 NALCNQ8IZF0 1738 aa8.97□□□□□ -0.97
GYPB-213ENST00000513128 ATF3P18847 181 aa8.97□□□□□ -0.97
GYPB-213ENST00000513128 BRINP3Q76B58 766 aa8.97□□□□□ -0.97
GYPB-213ENST00000513128 CADPS2Q86UW7 1296 aa8.97□□□□□ -0.97
GYPB-213ENST00000513128 RNF39Q9H2S5 420 aa8.97□□□□□ -0.97
GYPB-213ENST00000513128 NHSL1Q5SYE7 1610 aa8.97□□□□□ -0.97
GYPB-213ENST00000513128 ASXL1Q8IXJ9 1541 aa8.96□□□□□ -0.97
GYPB-213ENST00000513128 RIOK3O14730 519 aaKnown RBP8.96□□□□□ -0.98
GYPB-213ENST00000513128 KIF1BO60333 1816 aa8.96□□□□□ -0.98
GYPB-213ENST00000513128 MST1RQ04912 1400 aa8.96□□□□□ -0.98
GYPB-213ENST00000513128 PLEKHG5O94827 1062 aa8.95□□□□□ -0.98
GYPB-213ENST00000513128 ZNF326Q5BKZ1 582 aaKnown RBP8.95□□□□□ -0.98
GYPB-213ENST00000513128 DDX17Q92841 729 aaKnown RBP8.95□□□□□ -0.98
GYPB-213ENST00000513128 SPATA31A6Q5VVP1 1343 aa8.95□□□□□ -0.98
GYPB-213ENST00000513128 NAIPQ13075 1403 aa8.95□□□□□ -0.98
GYPB-213ENST00000513128 STK25O00506 426 aa8.94□□□□□ -0.98
GYPB-213ENST00000513128 DCCP43146 1447 aa8.94□□□□□ -0.98
GYPB-213ENST00000513128 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
GYPB-213ENST00000513128 NUTM2EB1AL46 878 aaPredicted RBP8.93□□□□□ -0.98
GYPB-213ENST00000513128 NUBP1P53384 320 aa8.93□□□□□ -0.98
GYPB-213ENST00000513128 BRPF1P55201 1214 aaPredicted RBP8.93□□□□□ -0.98
GYPB-213ENST00000513128 GSE1Q14687 1217 aa8.93□□□□□ -0.98
GYPB-213ENST00000513128 LMOD2Q6P5Q4 547 aa8.93□□□□□ -0.98
GYPB-213ENST00000513128 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
GYPB-213ENST00000513128 TRIM52Q96A61 297 aa8.93□□□□□ -0.98
GYPB-213ENST00000513128 ADGRL3Q9HAR2 1447 aa8.93□□□□□ -0.98
GYPB-213ENST00000513128 RRBP1Q9P2E9 1410 aaKnown RBP8.93□□□□□ -0.98
GYPB-213ENST00000513128 SETD5Q9C0A6 1442 aa8.92□□□□□ -0.98
GYPB-213ENST00000513128 MEX3CQ5U5Q3 659 aaKnown RBP8.92□□□□□ -0.98
GYPB-213ENST00000513128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.92□□□□□ -0.98
GYPB-213ENST00000513128 PPLO60437 1756 aa8.91□□□□□ -0.98
GYPB-213ENST00000513128 LAMC1P11047 1609 aa8.91□□□□□ -0.98
GYPB-213ENST00000513128 ROBO2Q9HCK4 1378 aa8.9□□□□□ -0.98
GYPB-213ENST00000513128 ZNF772Q68DY9 489 aaPredicted RBP8.9□□□□□ -0.98
GYPB-213ENST00000513128 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
GYPB-213ENST00000513128 PNPLA6Q8IY17 1366 aa8.89□□□□□ -0.99
GYPB-213ENST00000513128 AFF2P51816 1311 aa8.89□□□□□ -0.99
GYPB-213ENST00000513128 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
GYPB-213ENST00000513128 C1orf167Q5SNV9 1468 aa8.89□□□□□ -0.99
GYPB-213ENST00000513128 RXRBP28702 533 aa8.88□□□□□ -0.99
GYPB-213ENST00000513128 LRRC59Q96AG4 307 aaKnown RBP8.88□□□□□ -0.99
GYPB-213ENST00000513128 ORAI2Q96SN7 254 aa8.88□□□□□ -0.99
GYPB-213ENST00000513128 HFM1A2PYH4 1435 aa8.88□□□□□ -0.99
GYPB-213ENST00000513128 PTCH1Q13635 1447 aa8.88□□□□□ -0.99
GYPB-213ENST00000513128 VGFO15240 615 aaPredicted RBP8.87□□□□□ -0.99
GYPB-213ENST00000513128 DCAF8Q5TAQ9 597 aa8.87□□□□□ -0.99
GYPB-213ENST00000513128 C8orf37Q96NL8 207 aa8.87□□□□□ -0.99
GYPB-213ENST00000513128 RGS12O14924 1447 aa8.87□□□□□ -0.99
GYPB-213ENST00000513128 IFT172Q9UG01 1749 aa8.86□□□□□ -0.99
GYPB-213ENST00000513128 CDK12Q9NYV4 1490 aaPredicted RBP8.86□□□□□ -0.99
GYPB-213ENST00000513128 ADAMTS2O95450 1211 aa8.86□□□□□ -0.99
GYPB-213ENST00000513128 PRAG1Q86YV5 1406 aa8.86□□□□□ -0.99
GYPB-213ENST00000513128 SOS2Q07890 1332 aaPredicted RBP8.85□□□□□ -0.99
GYPB-213ENST00000513128 ADGRF5Q8IZF2 1346 aa8.84□□□□□ -0.99
GYPB-213ENST00000513128 COL22A1Q8NFW1 1626 aaPredicted RBP8.84□□□□□ -0.99
GYPB-213ENST00000513128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.84□□□□□ -0.99
GYPB-213ENST00000513128 ZFP91Q96JP5 570 aaPredicted RBP8.84□□□□□ -0.99
GYPB-213ENST00000513128 BCL11BQ9C0K0 894 aaPredicted RBP8.84□□□□□ -0.99
GYPB-213ENST00000513128 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
GYPB-213ENST00000513128 STK24Q9Y6E0 443 aa8.84□□□□□ -0.99
GYPB-213ENST00000513128 RPGRIP1LQ68CZ1 1315 aa8.83□□□□□ -1
GYPB-213ENST00000513128 MARF1Q9Y4F3 1742 aaKnown RBP8.83□□□□□ -1
GYPB-213ENST00000513128 CDC42BPGQ6DT37 1551 aa8.83□□□□□ -1
GYPB-213ENST00000513128 SPATA31E1Q6ZUB1 1445 aa8.83□□□□□ -1
GYPB-213ENST00000513128 DSG3P32926 999 aa8.83□□□□□ -1
GYPB-213ENST00000513128 C1QBPQ07021 282 aaKnown RBP8.83□□□□□ -1
GYPB-213ENST00000513128 NGLY1Q96IV0 654 aa8.83□□□□□ -1
GYPB-213ENST00000513128 PXDNQ92626 1479 aa8.83□□□□□ -1
GYPB-213ENST00000513128 RGPD8O14715 1765 aaPredicted RBP8.82□□□□□ -1
GYPB-213ENST00000513128 RBM6P78332 1123 aaKnown RBP8.82□□□□□ -1
GYPB-213ENST00000513128 XPCQ01831 940 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms