RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SHPRHQ149N8 1683 aa19.42■□□□□ 0.7
RNF4-215ENST00000511843 ADGRB1O14514 1584 aa19.41■□□□□ 0.7
RNF4-215ENST00000511843 RGPD8O14715 1765 aaPredicted RBP19.41■□□□□ 0.7
RNF4-215ENST00000511843 JCADQ9P266 1359 aa19.4■□□□□ 0.7
RNF4-215ENST00000511843 FMN2Q9NZ56 1722 aa19.39■□□□□ 0.7
RNF4-215ENST00000511843 ORAI2Q96SN7 254 aa19.39■□□□□ 0.69
RNF4-215ENST00000511843 NUTM2FA1L443 756 aa19.38■□□□□ 0.69
RNF4-215ENST00000511843 SAFB2Q14151 953 aaKnown RBP eCLIP19.37■□□□□ 0.69
RNF4-215ENST00000511843 LRP6O75581 1613 aa19.36■□□□□ 0.69
RNF4-215ENST00000511843 ARHGEF28Q8N1W1 1705 aaKnown RBP19.34■□□□□ 0.69
RNF4-215ENST00000511843 PRAM1Q96QH2 718 aa19.34■□□□□ 0.69
RNF4-215ENST00000511843 RGS17Q9UGC6 210 aaPredicted RBP19.34■□□□□ 0.69
RNF4-215ENST00000511843 DLC1Q96QB1 1528 aa19.34■□□□□ 0.69
RNF4-215ENST00000511843 TRAK1Q9UPV9 953 aa19.33■□□□□ 0.68
RNF4-215ENST00000511843 SIN3AQ96ST3 1273 aa19.32■□□□□ 0.68
RNF4-215ENST00000511843 KIAA1210Q9ULL0 1709 aa19.31■□□□□ 0.68
RNF4-215ENST00000511843 ESCO1Q5FWF5 840 aa19.31■□□□□ 0.68
RNF4-215ENST00000511843 NUTM2BA6NNL0 878 aaPredicted RBP19.3■□□□□ 0.68
RNF4-215ENST00000511843 NUTM2EB1AL46 878 aaPredicted RBP19.3■□□□□ 0.68
RNF4-215ENST00000511843 NUTM2AQ8IVF1 878 aaPredicted RBP19.3■□□□□ 0.68
RNF4-215ENST00000511843 SIRT1Q96EB6 747 aa19.3■□□□□ 0.68
RNF4-215ENST00000511843 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
RNF4-215ENST00000511843 POGKQ9P215 609 aa19.29■□□□□ 0.68
RNF4-215ENST00000511843 USP32Q8NFA0 1604 aa19.29■□□□□ 0.68
RNF4-215ENST00000511843 SPATA31A6Q5VVP1 1343 aa19.28■□□□□ 0.68
RNF4-215ENST00000511843 XPCQ01831 940 aaPredicted RBP19.28■□□□□ 0.68
RNF4-215ENST00000511843 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
RNF4-215ENST00000511843 STAC3Q96MF2 364 aa19.28■□□□□ 0.68
RNF4-215ENST00000511843 PNPLA6Q8IY17 1366 aa19.28■□□□□ 0.68
RNF4-215ENST00000511843 ADGRB2O60241 1585 aa19.27■□□□□ 0.68
RNF4-215ENST00000511843 KIF1AQ12756 1690 aa19.27■□□□□ 0.68
RNF4-215ENST00000511843 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.68
RNF4-215ENST00000511843 HIRIP3Q9BW71 556 aaPredicted RBP19.27■□□□□ 0.68
RNF4-215ENST00000511843 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
RNF4-215ENST00000511843 MEX3CQ5U5Q3 659 aaKnown RBP19.26■□□□□ 0.67
RNF4-215ENST00000511843 PXDNQ92626 1479 aa19.26■□□□□ 0.67
RNF4-215ENST00000511843 SOS2Q07890 1332 aaPredicted RBP19.25■□□□□ 0.67
RNF4-215ENST00000511843 SOCS7O14512 581 aa19.25■□□□□ 0.67
RNF4-215ENST00000511843 FOXO3O43524 673 aa19.25■□□□□ 0.67
RNF4-215ENST00000511843 POTEAQ6S8J7 498 aa19.25■□□□□ 0.67
RNF4-215ENST00000511843 L3MBTL2Q969R5 705 aa19.25■□□□□ 0.67
RNF4-215ENST00000511843 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
RNF4-215ENST00000511843 NPHP3Q7Z494 1330 aa19.22■□□□□ 0.67
RNF4-215ENST00000511843 TRPM1Q7Z4N2 1603 aa19.22■□□□□ 0.67
RNF4-215ENST00000511843 COL22A1Q8NFW1 1626 aaPredicted RBP19.22■□□□□ 0.67
RNF4-215ENST00000511843 MARF1Q9Y4F3 1742 aaKnown RBP19.18■□□□□ 0.66
RNF4-215ENST00000511843 PHF8Q9UPP1 1060 aa19.18■□□□□ 0.66
RNF4-215ENST00000511843 TULP4Q9NRJ4 1543 aa19.18■□□□□ 0.66
RNF4-215ENST00000511843 QRICH2Q9H0J4 1663 aa19.17■□□□□ 0.66
RNF4-215ENST00000511843 PRR36Q9H6K5 1346 aa19.17■□□□□ 0.66
RNF4-215ENST00000511843 ITSN1Q15811 1721 aa19.17■□□□□ 0.66
RNF4-215ENST00000511843 ANKARQ7Z5J8 1434 aa19.17■□□□□ 0.66
RNF4-215ENST00000511843 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
RNF4-215ENST00000511843 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
RNF4-215ENST00000511843 C8orf37Q96NL8 207 aa19.15■□□□□ 0.66
RNF4-215ENST00000511843 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
RNF4-215ENST00000511843 KRT28Q7Z3Y7 464 aa19.14■□□□□ 0.65
RNF4-215ENST00000511843 AFF2P51816 1311 aa19.14■□□□□ 0.65
RNF4-215ENST00000511843 TRPM3Q9HCF6 1732 aaPredicted RBP19.14■□□□□ 0.65
RNF4-215ENST00000511843 ABCA3Q99758 1704 aa19.12■□□□□ 0.65
RNF4-215ENST00000511843 TOPAZ1Q8N9V7 1692 aa19.12■□□□□ 0.65
RNF4-215ENST00000511843 PLEKHG5O94827 1062 aa19.12■□□□□ 0.65
RNF4-215ENST00000511843 ATP7BP35670 1465 aa19.11■□□□□ 0.65
RNF4-215ENST00000511843 SPATA31A3Q5VYP0 1347 aa19.11■□□□□ 0.65
RNF4-215ENST00000511843 TNS3Q68CZ2 1445 aa19.1■□□□□ 0.65
RNF4-215ENST00000511843 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
RNF4-215ENST00000511843 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
RNF4-215ENST00000511843 ZNF772Q68DY9 489 aaPredicted RBP19.1■□□□□ 0.65
RNF4-215ENST00000511843 PSME1Q06323 249 aa19.09■□□□□ 0.65
RNF4-215ENST00000511843 ALS2Q96Q42 1657 aa19.08■□□□□ 0.65
RNF4-215ENST00000511843 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
RNF4-215ENST00000511843 CDK19Q9BWU1 502 aa19.08■□□□□ 0.64
RNF4-215ENST00000511843 ROCK2O75116 1388 aaKnown RBP19.07■□□□□ 0.64
RNF4-215ENST00000511843 TONSLQ96HA7 1378 aa19.07■□□□□ 0.64
RNF4-215ENST00000511843 CENPJQ9HC77 1338 aaPredicted RBP19.07■□□□□ 0.64
RNF4-215ENST00000511843 LMOD2Q6P5Q4 547 aa19.07■□□□□ 0.64
RNF4-215ENST00000511843 NUDT16Q96DE0 195 aaKnown RBP19.07■□□□□ 0.64
RNF4-215ENST00000511843 CABLES1Q8TDN4 633 aa19.06■□□□□ 0.64
RNF4-215ENST00000511843 SBNO1A3KN83 1393 aa19.05■□□□□ 0.64
RNF4-215ENST00000511843 CRYBG1Q9Y4K1 1723 aa19.03■□□□□ 0.64
RNF4-215ENST00000511843 NGDNQ8NEJ9 315 aaKnown RBP19.03■□□□□ 0.64
RNF4-215ENST00000511843 GPRASP1Q5JY77 1395 aa19.03■□□□□ 0.64
RNF4-215ENST00000511843 PLCH1Q4KWH8 1693 aa19.02■□□□□ 0.64
RNF4-215ENST00000511843 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
RNF4-215ENST00000511843 QTRT2Q9H974 415 aaKnown RBP19.02■□□□□ 0.64
RNF4-215ENST00000511843 RXRBP28702 533 aa19.01■□□□□ 0.63
RNF4-215ENST00000511843 SRPK2P78362 688 aaKnown RBP19.01■□□□□ 0.63
RNF4-215ENST00000511843 CABP2Q9NPB3 220 aa19.01■□□□□ 0.63
RNF4-215ENST00000511843 USP21Q9UK80 565 aa19.01■□□□□ 0.63
RNF4-215ENST00000511843 ARHGEF10O15013 1369 aa19■□□□□ 0.63
RNF4-215ENST00000511843 RALGAPBQ86X10 1494 aa19■□□□□ 0.63
RNF4-215ENST00000511843 PAK3O75914 559 aaPredicted RBP18.99■□□□□ 0.63
RNF4-215ENST00000511843 HAP1P54257 671 aaPredicted RBP18.99■□□□□ 0.63
RNF4-215ENST00000511843 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.99■□□□□ 0.63
RNF4-215ENST00000511843 BCL9LQ86UU0 1499 aa18.98■□□□□ 0.63
RNF4-215ENST00000511843 FNBP4Q8N3X1 1017 aaPredicted RBP18.98■□□□□ 0.63
RNF4-215ENST00000511843 PPIP5K1Q6PFW1 1433 aa18.98■□□□□ 0.63
RNF4-215ENST00000511843 ACEP12821 1306 aa18.98■□□□□ 0.63
RNF4-215ENST00000511843 PHRF1Q9P1Y6 1649 aaKnown RBP18.97■□□□□ 0.63
RNF4-215ENST00000511843 CCDC61Q9Y6R9 512 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms