RNA–Protein interactions for RNA: ENST00000511600.5

RNF4-214, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF4, Length 4,123 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-214ENST00000511600 HDAC5Q9UQL6 1122 aa8.52□□□□□ -1.05
RNF4-214ENST00000511600 DDX49Q9Y6V7 483 aaKnown RBP8.52□□□□□ -1.05
RNF4-214ENST00000511600 TEX35Q5T0J7 233 aa8.52□□□□□ -1.05
RNF4-214ENST00000511600 PDCL2Q8N4E4 241 aa8.52□□□□□ -1.05
RNF4-214ENST00000511600 KIF15Q9NS87 1388 aa8.52□□□□□ -1.05
RNF4-214ENST00000511600 KDM5BQ9UGL1 1544 aa8.52□□□□□ -1.05
RNF4-214ENST00000511600 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
RNF4-214ENST00000511600 ZNF622Q969S3 477 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNF4-214ENST00000511600 ARHGEF12Q9NZN5 1544 aa8.51□□□□□ -1.05
RNF4-214ENST00000511600 SMG6Q86US8 1419 aaKnown RBP8.51□□□□□ -1.05
RNF4-214ENST00000511600 PLCB2Q00722 1185 aa8.51□□□□□ -1.05
RNF4-214ENST00000511600 L3MBTL2Q969R5 705 aa8.51□□□□□ -1.05
RNF4-214ENST00000511600 PANK2Q9BZ23 570 aa8.51□□□□□ -1.05
RNF4-214ENST00000511600 HTATSF1O43719 755 aaKnown RBP8.5□□□□□ -1.05
RNF4-214ENST00000511600 GPS2Q13227 327 aa8.5□□□□□ -1.05
RNF4-214ENST00000511600 PRKRIP1Q9H875 184 aaPredicted RBP8.5□□□□□ -1.05
RNF4-214ENST00000511600 NUP155O75694 1391 aa8.5□□□□□ -1.05
RNF4-214ENST00000511600 CWC15Q9P013 229 aaKnown RBP8.5□□□□□ -1.05
RNF4-214ENST00000511600 DMRT2Q9Y5R5 561 aa8.5□□□□□ -1.05
RNF4-214ENST00000511600 SAMD9LQ8IVG5 1584 aa8.5□□□□□ -1.05
RNF4-214ENST00000511600 PLXNC1O60486 1568 aa8.5□□□□□ -1.05
RNF4-214ENST00000511600 PRDM4Q9UKN5 801 aa8.5□□□□□ -1.05
RNF4-214ENST00000511600 ARAP3Q8WWN8 1544 aa8.5□□□□□ -1.05
RNF4-214ENST00000511600 CDC42BPBQ9Y5S2 1711 aa8.5□□□□□ -1.05
RNF4-214ENST00000511600 MAPK8IP3Q9UPT6 1336 aa8.49□□□□□ -1.05
RNF4-214ENST00000511600 HSPA5P11021 654 aaKnown RBP8.49□□□□□ -1.05
RNF4-214ENST00000511600 SYAP1Q96A49 352 aaPredicted RBP8.49□□□□□ -1.05
RNF4-214ENST00000511600 CCDC9Q9Y3X0 531 aaKnown RBP8.49□□□□□ -1.05
RNF4-214ENST00000511600 POLR1AO95602 1720 aaPredicted RBP8.48□□□□□ -1.05
RNF4-214ENST00000511600 MCM5P33992 734 aa8.48□□□□□ -1.05
RNF4-214ENST00000511600 PKD2Q13563 968 aa8.48□□□□□ -1.05
RNF4-214ENST00000511600 WDR43Q15061 677 aaKnown RBP eCLIP8.48□□□□□ -1.05
RNF4-214ENST00000511600 MBD5Q9P267 1494 aa8.48□□□□□ -1.05
RNF4-214ENST00000511600 EFCAB2Q5VUJ9 269 aa8.48□□□□□ -1.05
RNF4-214ENST00000511600 FBXO41Q8TF61 875 aa8.48□□□□□ -1.05
RNF4-214ENST00000511600 ADGRL1O94910 1474 aa8.48□□□□□ -1.05
RNF4-214ENST00000511600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.48□□□□□ -1.05
RNF4-214ENST00000511600 DEF6Q9H4E7 631 aa8.48□□□□□ -1.05
RNF4-214ENST00000511600 DUOX2Q9NRD8 1548 aa8.48□□□□□ -1.05
RNF4-214ENST00000511600 CTR9Q6PD62 1173 aa8.48□□□□□ -1.05
RNF4-214ENST00000511600 CNTLNQ9NXG0 1405 aa8.47□□□□□ -1.05
RNF4-214ENST00000511600 ZCCHC11Q5TAX3 1644 aaKnown RBP8.47□□□□□ -1.05
RNF4-214ENST00000511600 GTF2A1P52655 376 aaPredicted RBP8.47□□□□□ -1.05
RNF4-214ENST00000511600 LMOD3Q0VAK6 560 aa8.47□□□□□ -1.05
RNF4-214ENST00000511600 SECISBP2LQ93073 1101 aaKnown RBP8.47□□□□□ -1.05
RNF4-214ENST00000511600 RAPGEF3O95398 923 aa8.47□□□□□ -1.05
RNF4-214ENST00000511600 SETQ01105 290 aaPredicted RBP8.47□□□□□ -1.05
RNF4-214ENST00000511600 SYCP2Q9BX26 1530 aa8.47□□□□□ -1.05
RNF4-214ENST00000511600 UNC13BO14795 1591 aa8.47□□□□□ -1.05
RNF4-214ENST00000511600 TTC37Q6PGP7 1564 aa8.47□□□□□ -1.05
RNF4-214ENST00000511600 WDR7Q9Y4E6 1490 aa8.46□□□□□ -1.05
RNF4-214ENST00000511600 TRIM6-TRIM34B2RNG4 842 aa8.46□□□□□ -1.05
RNF4-214ENST00000511600 HMGB1P09429 215 aaKnown RBP8.46□□□□□ -1.05
RNF4-214ENST00000511600 CNPY4Q8N129 248 aa8.46□□□□□ -1.05
RNF4-214ENST00000511600 TRIM34Q9BYJ4 488 aa8.46□□□□□ -1.05
RNF4-214ENST00000511600 PLCH2O75038 1416 aa8.46□□□□□ -1.05
RNF4-214ENST00000511600 ERBINQ96RT1 1412 aa8.46□□□□□ -1.05
RNF4-214ENST00000511600 XPCQ01831 940 aaPredicted RBP8.46□□□□□ -1.06
RNF4-214ENST00000511600 ROCK2O75116 1388 aaKnown RBP8.46□□□□□ -1.06
RNF4-214ENST00000511600 UHRF1BP1Q6BDS2 1440 aa8.46□□□□□ -1.06
RNF4-214ENST00000511600 HNRNPMP52272 730 aaKnown RBP eCLIP8.46□□□□□ -1.066e-9■■■■■ 27.4
RNF4-214ENST00000511600 CRBNQ96SW2 442 aa8.46□□□□□ -1.06
RNF4-214ENST00000511600 DIP2BQ9P265 1576 aa8.45□□□□□ -1.06
RNF4-214ENST00000511600 PRIMPOLQ96LW4 560 aa8.45□□□□□ -1.06
RNF4-214ENST00000511600 RALBP1Q15311 655 aa8.45□□□□□ -1.06
RNF4-214ENST00000511600 CCDC7Q96M83 1385 aa8.45□□□□□ -1.06
RNF4-214ENST00000511600 RALGAPBQ86X10 1494 aa8.45□□□□□ -1.06
RNF4-214ENST00000511600 FAM135AQ9P2D6 1515 aa8.45□□□□□ -1.06
RNF4-214ENST00000511600 PIAS4Q8N2W9 510 aaPredicted RBP8.44□□□□□ -1.06
RNF4-214ENST00000511600 ERICH4A6NGS2 130 aa8.44□□□□□ -1.06
RNF4-214ENST00000511600 PHF14O94880 888 aa8.44□□□□□ -1.06
RNF4-214ENST00000511600 HS1BP3Q53T59 392 aa8.44□□□□□ -1.06
RNF4-214ENST00000511600 CCDC144AA2RUR9 1427 aa8.43□□□□□ -1.06
RNF4-214ENST00000511600 RTEL1-TNFRSF6BF6WH68 1400 aa8.43□□□□□ -1.06
RNF4-214ENST00000511600 IQGAP3Q86VI3 1631 aa8.43□□□□□ -1.06
RNF4-214ENST00000511600 ABCC1P33527 1531 aa8.43□□□□□ -1.06
RNF4-214ENST00000511600 GPATCH11Q8N954 259 aa8.43□□□□□ -1.06
RNF4-214ENST00000511600 NRDCO43847 1150 aa8.43□□□□□ -1.06
RNF4-214ENST00000511600 CHGAP10645 457 aaKnown RBP8.43□□□□□ -1.06
RNF4-214ENST00000511600 SSR1P43307 286 aaKnown RBP8.43□□□□□ -1.06
RNF4-214ENST00000511600 BANK1Q8NDB2 785 aa8.43□□□□□ -1.06
RNF4-214ENST00000511600 PLCD4Q9BRC7 762 aa8.43□□□□□ -1.06
RNF4-214ENST00000511600 SPDYE4A6NLX3 237 aa8.42□□□□□ -1.06
RNF4-214ENST00000511600 PPP4R3CPQ6ZMV5 832 aa8.42□□□□□ -1.06
RNF4-214ENST00000511600 EIF2AK4Q9P2K8 1649 aaKnown RBP8.42□□□□□ -1.06
RNF4-214ENST00000511600 MFAP1P55081 439 aaKnown RBP8.42□□□□□ -1.06
RNF4-214ENST00000511600 USP47Q96K76 1375 aa8.41□□□□□ -1.06
RNF4-214ENST00000511600 GABPB1Q06547 395 aaPredicted RBP8.41□□□□□ -1.06
RNF4-214ENST00000511600 FEZ1Q99689 392 aa8.41□□□□□ -1.06
RNF4-214ENST00000511600 DRC7Q8IY82 874 aa8.41□□□□□ -1.06
RNF4-214ENST00000511600 HSPA2P54652 639 aa8.41□□□□□ -1.06
RNF4-214ENST00000511600 KANK1Q14678 1352 aa8.41□□□□□ -1.06
RNF4-214ENST00000511600 SPATA31E1Q6ZUB1 1445 aa8.4□□□□□ -1.06
RNF4-214ENST00000511600 ZNF830Q96NB3 372 aaPredicted RBP8.4□□□□□ -1.06
RNF4-214ENST00000511600 TRERF1Q96PN7 1200 aa8.4□□□□□ -1.06
RNF4-214ENST00000511600 MAGI2Q86UL8 1455 aa8.4□□□□□ -1.06
RNF4-214ENST00000511600 CFAP74Q9C0B2 1584 aa8.4□□□□□ -1.06
RNF4-214ENST00000511600 NBPF8Q3BBV2 869 aa8.4□□□□□ -1.07
RNF4-214ENST00000511600 VGFO15240 615 aaPredicted RBP8.39□□□□□ -1.07
RNF4-214ENST00000511600 TDO2P48775 406 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms