RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 POTEB2H3BUK9 544 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 MAP9Q49MG5 647 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 ANKRD18AQ8IVF6 992 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 DACH1Q9UI36 760 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 SMG6Q86US8 1419 aaKnown RBP10.01□□□□□ -0.81
HTT-208ENST00000510626 LUZP1Q86V48 1076 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 KANK4Q5T7N3 995 aaPredicted RBP10.01□□□□□ -0.81
HTT-208ENST00000510626 C11orf95C9JLR9 678 aaPredicted RBP10.01□□□□□ -0.81
HTT-208ENST00000510626 GRPEL1Q9HAV7 217 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 ANKRD1Q15327 319 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 KIF21BO75037 1637 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 TRDNQ13061 729 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 GBP3Q9H0R5 595 aa10.01□□□□□ -0.81
HTT-208ENST00000510626 TUBBP07437 444 aa10□□□□□ -0.81
HTT-208ENST00000510626 RUNDC1Q96C34 613 aa10□□□□□ -0.81
HTT-208ENST00000510626 ANO2Q9NQ90 1003 aa10□□□□□ -0.81
HTT-208ENST00000510626 A0A0G2JS52 829 aa10□□□□□ -0.81
HTT-208ENST00000510626 EFCAB2Q5VUJ9 269 aa10□□□□□ -0.81
HTT-208ENST00000510626 EIF4G1Q04637 1599 aaKnown RBP10□□□□□ -0.81
HTT-208ENST00000510626 GNAI1P63096 354 aa10□□□□□ -0.81
HTT-208ENST00000510626 CCDC88BA6NC98 1476 aa10□□□□□ -0.81
HTT-208ENST00000510626 ERICH3Q5RHP9 1530 aa10□□□□□ -0.81
HTT-208ENST00000510626 APBB1O00213 710 aa10□□□□□ -0.81
HTT-208ENST00000510626 NEMFO60524 1076 aa10□□□□□ -0.81
HTT-208ENST00000510626 WDR33Q9C0J8 1336 aaKnown RBP10□□□□□ -0.81
HTT-208ENST00000510626 AMOTL1Q8IY63 956 aa10□□□□□ -0.81
HTT-208ENST00000510626 GCC1Q96CN9 775 aa10□□□□□ -0.81
HTT-208ENST00000510626 FILIP1LQ4L180 1135 aa9.99□□□□□ -0.81
HTT-208ENST00000510626 BACH2Q9BYV9 841 aa9.99□□□□□ -0.81
HTT-208ENST00000510626 GTPBP4Q9BZE4 634 aaKnown RBP9.99□□□□□ -0.81
HTT-208ENST00000510626 TERF1P54274 439 aa9.99□□□□□ -0.81
HTT-208ENST00000510626 HMGB1P1B2RPK0 211 aaPredicted RBP9.99□□□□□ -0.81
HTT-208ENST00000510626 MARCH6O60337 910 aa9.99□□□□□ -0.81
HTT-208ENST00000510626 XBP1P17861 261 aa9.99□□□□□ -0.81
HTT-208ENST00000510626 ZNHIT6Q9NWK9 470 aaKnown RBP9.99□□□□□ -0.81
HTT-208ENST00000510626 ABCC8Q09428 1581 aa9.99□□□□□ -0.81
HTT-208ENST00000510626 UQCRHLA0A096LP55 91 aa9.99□□□□□ -0.81
HTT-208ENST00000510626 UQCRHP07919 91 aa9.99□□□□□ -0.81
HTT-208ENST00000510626 GBP2P32456 591 aaPredicted RBP9.98□□□□□ -0.81
HTT-208ENST00000510626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.98□□□□□ -0.81
HTT-208ENST00000510626 MICALCLQ6ZW33 695 aa9.98□□□□□ -0.81
HTT-208ENST00000510626 SRCIN1Q9C0H9 1055 aa9.98□□□□□ -0.81
HTT-208ENST00000510626 NEFHP12036 1026 aa9.98□□□□□ -0.81
HTT-208ENST00000510626 CGNQ9P2M7 1197 aaKnown RBP9.98□□□□□ -0.81
HTT-208ENST00000510626 IFIT2P09913 472 aaKnown RBP9.98□□□□□ -0.81
HTT-208ENST00000510626 CNTROBQ8N137 903 aa9.98□□□□□ -0.81
HTT-208ENST00000510626 IVLP07476 585 aa9.97□□□□□ -0.81
HTT-208ENST00000510626 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
HTT-208ENST00000510626 RILPL2Q969X0 211 aa9.97□□□□□ -0.81
HTT-208ENST00000510626 ST20-MTHFSA0A0A6YYL1 179 aa9.96□□□□□ -0.81
HTT-208ENST00000510626 SDF4Q9BRK5 362 aa9.96□□□□□ -0.81
HTT-208ENST00000510626 FOXD4L1Q9NU39 408 aa9.96□□□□□ -0.81
HTT-208ENST00000510626 EZRP15311 586 aaKnown RBP9.96□□□□□ -0.82
HTT-208ENST00000510626 MYOM3Q5VTT5 1437 aa9.96□□□□□ -0.82
HTT-208ENST00000510626 SSR1P43307 286 aaKnown RBP9.96□□□□□ -0.82
HTT-208ENST00000510626 KIF20AO95235 890 aa9.96□□□□□ -0.82
HTT-208ENST00000510626 DDX58O95786 925 aaKnown RBP9.96□□□□□ -0.82
HTT-208ENST00000510626 ERICH2A1L162 156 aa9.95□□□□□ -0.82
HTT-208ENST00000510626 SART3Q15020 963 aaKnown RBP9.95□□□□□ -0.82
HTT-208ENST00000510626 ERC1Q8IUD2 1116 aa9.95□□□□□ -0.82
HTT-208ENST00000510626 STK11IPQ8N1F8 1099 aa9.95□□□□□ -0.82
HTT-208ENST00000510626 BRPF3Q9ULD4 1205 aa9.95□□□□□ -0.82
HTT-208ENST00000510626 POLA1P09884 1462 aaPredicted RBP9.95□□□□□ -0.82
HTT-208ENST00000510626 G3BP1Q13283 466 aaKnown RBP eCLIP9.95□□□□□ -0.824e-6■■■□□ 15.5
HTT-208ENST00000510626 SLC4A10Q6U841 1118 aa9.95□□□□□ -0.82
HTT-208ENST00000510626 CFAP45Q9UL16 551 aa9.95□□□□□ -0.82
HTT-208ENST00000510626 V9GYY5 206 aaPredicted RBP9.95□□□□□ -0.82
HTT-208ENST00000510626 GOLGA6L9A6NEM1 432 aa9.95□□□□□ -0.82
HTT-208ENST00000510626 NAP1L1P55209 391 aaKnown RBP9.95□□□□□ -0.82
HTT-208ENST00000510626 COG3Q96JB2 828 aa9.95□□□□□ -0.82
HTT-208ENST00000510626 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.95□□□□□ -0.82
HTT-208ENST00000510626 STIM1Q13586 685 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 CTAGE5O15320 804 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 CCDC146Q8IYE0 955 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 PPFIBP1Q86W92 1011 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 EPS15P42566 896 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 ZSCAN31Q96LW9 406 aaPredicted RBP9.94□□□□□ -0.82
HTT-208ENST00000510626 DYDC1Q8WWB3 177 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 KIF18AQ8NI77 898 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 PCMTD1Q96MG8 357 aaPredicted RBP9.94□□□□□ -0.82
HTT-208ENST00000510626 TAOK2Q9UL54 1235 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 VGFO15240 615 aaPredicted RBP9.94□□□□□ -0.82
HTT-208ENST00000510626 SLC26A8Q96RN1 970 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 MAGEC2Q9UBF1 373 aaPredicted RBP9.94□□□□□ -0.82
HTT-208ENST00000510626 COG6Q9Y2V7 657 aa9.94□□□□□ -0.82
HTT-208ENST00000510626 NOL10Q9BSC4 688 aaKnown RBP9.93□□□□□ -0.82
HTT-208ENST00000510626 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
HTT-208ENST00000510626 FOXD4L5Q5VV16 416 aaPredicted RBP9.93□□□□□ -0.82
HTT-208ENST00000510626 JAKMIP3Q5VZ66 844 aa9.93□□□□□ -0.82
HTT-208ENST00000510626 CEP57L1Q8IYX8 460 aa9.93□□□□□ -0.82
HTT-208ENST00000510626 FOXD4L4Q8WXT5 416 aaPredicted RBP9.93□□□□□ -0.82
HTT-208ENST00000510626 TXLNAP40222 546 aa9.93□□□□□ -0.82
HTT-208ENST00000510626 KIF3BO15066 747 aa9.93□□□□□ -0.82
HTT-208ENST00000510626 PAXBP1Q9Y5B6 917 aa9.93□□□□□ -0.82
HTT-208ENST00000510626 SMC2O95347 1197 aa9.93□□□□□ -0.82
HTT-208ENST00000510626 WDR63Q8IWG1 891 aa9.93□□□□□ -0.82
HTT-208ENST00000510626 MCM4P33991 863 aa9.93□□□□□ -0.82
HTT-208ENST00000510626 RRBP1Q9P2E9 1410 aaKnown RBP9.93□□□□□ -0.82
HTT-208ENST00000510626 RBM28Q9NW13 759 aaKnown RBP9.93□□□□□ -0.82
HTT-208ENST00000510626 SRRTQ9BXP5 876 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms