RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 ANP32CO43423 234 aa9.87□□□□□ -0.83
CAST-232ENST00000510500 MTERF4Q7Z6M4 381 aaKnown RBP9.87□□□□□ -0.83
CAST-232ENST00000510500 PCDH10Q9P2E7 1040 aa9.87□□□□□ -0.83
CAST-232ENST00000510500 BANK1Q8NDB2 785 aa9.86□□□□□ -0.83
CAST-232ENST00000510500 CCER2I3L3R5 266 aa9.86□□□□□ -0.83
CAST-232ENST00000510500 POLD1P28340 1107 aa9.86□□□□□ -0.83
CAST-232ENST00000510500 FOSBP53539 338 aa9.86□□□□□ -0.83
CAST-232ENST00000510500 ZHX1Q9UKY1 873 aaPredicted RBP9.86□□□□□ -0.83
CAST-232ENST00000510500 SMARCA4P51532 1647 aa9.86□□□□□ -0.83
CAST-232ENST00000510500 ARHGEF11O15085 1522 aa9.85□□□□□ -0.83
CAST-232ENST00000510500 PRKAR2AP13861 404 aaKnown RBP9.85□□□□□ -0.83
CAST-232ENST00000510500 PDE4DQ08499 809 aa9.85□□□□□ -0.83
CAST-232ENST00000510500 DDX46Q7L014 1031 aaKnown RBP9.85□□□□□ -0.83
CAST-232ENST00000510500 ZFYVE27Q5T4F4 411 aa9.84□□□□□ -0.83
CAST-232ENST00000510500 SEMA3EO15041 775 aa9.84□□□□□ -0.83
CAST-232ENST00000510500 CREB3O43889 395 aa9.84□□□□□ -0.83
CAST-232ENST00000510500 SCP2P22307 547 aa9.84□□□□□ -0.83
CAST-232ENST00000510500 GOLGA6CA6NDK9 693 aa9.83□□□□□ -0.84
CAST-232ENST00000510500 GOLGA6BA6NDN3 693 aa9.83□□□□□ -0.84
CAST-232ENST00000510500 EXOC5O00471 708 aa9.83□□□□□ -0.84
CAST-232ENST00000510500 GOLGA6DP0CG33 693 aa9.83□□□□□ -0.84
CAST-232ENST00000510500 LIG1P18858 919 aa9.83□□□□□ -0.84
CAST-232ENST00000510500 SSFA2P28290 1259 aa9.83□□□□□ -0.84
CAST-232ENST00000510500 LMOD3Q0VAK6 560 aa9.83□□□□□ -0.84
CAST-232ENST00000510500 WDR78Q5VTH9 848 aa9.83□□□□□ -0.84
CAST-232ENST00000510500 ZNF513Q8N8E2 541 aaPredicted RBP9.83□□□□□ -0.84
CAST-232ENST00000510500 METTL14Q9HCE5 456 aaKnown RBP9.83□□□□□ -0.84
CAST-232ENST00000510500 GOLGA6AQ9NYA3 693 aa9.83□□□□□ -0.84
CAST-232ENST00000510500 CSPP1Q1MSJ5 1256 aa9.82□□□□□ -0.84
CAST-232ENST00000510500 DNAJC14Q6Y2X3 702 aaPredicted RBP9.82□□□□□ -0.84
CAST-232ENST00000510500 PPP1R1BQ9UD71 204 aaPredicted RBP9.82□□□□□ -0.84
CAST-232ENST00000510500 PLEKHG3A1L390 1219 aa9.82□□□□□ -0.84
CAST-232ENST00000510500 POTEGQ6S5H5 508 aa9.82□□□□□ -0.84
CAST-232ENST00000510500 CLEC4GQ6UXB4 293 aa9.82□□□□□ -0.84
CAST-232ENST00000510500 MIER1Q8N108 512 aa9.82□□□□□ -0.84
CAST-232ENST00000510500 CDCA7Q9BWT1 371 aaPredicted RBP9.82□□□□□ -0.84
CAST-232ENST00000510500 MRVI1Q9Y6F6 885 aa9.82□□□□□ -0.84
CAST-232ENST00000510500 EIF3JO75822 258 aaKnown RBP9.81□□□□□ -0.84
CAST-232ENST00000510500 MCM6Q14566 821 aa9.81□□□□□ -0.84
CAST-232ENST00000510500 RGL3Q3MIN7 710 aa9.81□□□□□ -0.84
CAST-232ENST00000510500 CACTIN-AS1Q8N1I8 211 aa9.81□□□□□ -0.84
CAST-232ENST00000510500 RNF217Q8TC41 542 aa9.81□□□□□ -0.84
CAST-232ENST00000510500 MAF1Q9H063 256 aa9.81□□□□□ -0.84
CAST-232ENST00000510500 RRAGDQ9NQL2 400 aaPredicted RBP9.81□□□□□ -0.84
CAST-232ENST00000510500 IVNS1ABPQ9Y6Y0 642 aa9.81□□□□□ -0.84
CAST-232ENST00000510500 TRIM66O15016 1216 aa9.8□□□□□ -0.84
CAST-232ENST00000510500 SH3BP5O60239 455 aa9.8□□□□□ -0.84
CAST-232ENST00000510500 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
CAST-232ENST00000510500 ITFG2Q969R8 447 aa9.8□□□□□ -0.84
CAST-232ENST00000510500 TERF1P54274 439 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 UVSSAQ2YD98 709 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 CXorf38Q8TB03 319 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 BORCS6Q96GS4 357 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 PNMA2Q9UL42 364 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 PEG3Q9GZU2 1588 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 ZRANB2O95218 330 aaKnown RBP eCLIP9.79□□□□□ -0.84
CAST-232ENST00000510500 ZNF280DQ6N043 979 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 MAMSTRQ6ZN01 415 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 HELBQ8NG08 1087 aaPredicted RBP9.79□□□□□ -0.84
CAST-232ENST00000510500 FAM210AQ96ND0 272 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 CEP83Q9Y592 693 aa9.79□□□□□ -0.84
CAST-232ENST00000510500 APLP1P51693 650 aa9.78□□□□□ -0.84
CAST-232ENST00000510500 CEP126Q9P2H0 1117 aa9.78□□□□□ -0.84
CAST-232ENST00000510500 KLHL42Q9P2K6 505 aa9.78□□□□□ -0.84
CAST-232ENST00000510500 CIZ1Q9ULV3 898 aaPredicted RBP9.78□□□□□ -0.84
CAST-232ENST00000510500 DHX16O60231 1041 aaKnown RBP9.77□□□□□ -0.84
CAST-232ENST00000510500 RBM46Q8TBY0 533 aaKnown RBP9.77□□□□□ -0.84
CAST-232ENST00000510500 SNRNP27Q8WVK2 155 aaKnown RBP9.77□□□□□ -0.84
CAST-232ENST00000510500 IPO9Q96P70 1041 aaKnown RBP9.77□□□□□ -0.84
CAST-232ENST00000510500 TSPYL1Q9H0U9 437 aa9.77□□□□□ -0.84
CAST-232ENST00000510500 CCDC194A0A1B0GVG4 234 aa9.77□□□□□ -0.85
CAST-232ENST00000510500 PRR29P0C7W0 189 aa9.77□□□□□ -0.85
CAST-232ENST00000510500 PAX3P23760 479 aa9.77□□□□□ -0.85
CAST-232ENST00000510500 TXNDC2Q86VQ3 553 aa9.77□□□□□ -0.85
CAST-232ENST00000510500 ZSCAN20P17040 1043 aaPredicted RBP9.76□□□□□ -0.85
CAST-232ENST00000510500 KRI1Q8N9T8 703 aaKnown RBP9.76□□□□□ -0.85
CAST-232ENST00000510500 PMM1Q92871 262 aa9.76□□□□□ -0.85
CAST-232ENST00000510500 EFCC1Q9HA90 598 aa9.76□□□□□ -0.85
CAST-232ENST00000510500 ZRSR2Q15696 482 aaKnown RBP9.75□□□□□ -0.85
CAST-232ENST00000510500 CEP164Q9UPV0 1460 aa9.75□□□□□ -0.85
CAST-232ENST00000510500 PARNO95453 639 aaKnown RBP9.75□□□□□ -0.85
CAST-232ENST00000510500 ZC3H6P61129 1189 aaKnown RBP9.75□□□□□ -0.85
CAST-232ENST00000510500 POM121Q96HA1 1249 aa9.75□□□□□ -0.85
CAST-232ENST00000510500 SPOCK3Q9BQ16 436 aa9.75□□□□□ -0.85
CAST-232ENST00000510500 JADE2Q9NQC1 790 aa9.75□□□□□ -0.85
CAST-232ENST00000510500 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
CAST-232ENST00000510500 CYB5RLQ6IPT4 315 aa9.74□□□□□ -0.85
CAST-232ENST00000510500 GPATCH3Q96I76 525 aa9.74□□□□□ -0.85
CAST-232ENST00000510500 PAIP2Q9BPZ3 127 aaKnown RBP9.74□□□□□ -0.85
CAST-232ENST00000510500 STK24Q9Y6E0 443 aa9.74□□□□□ -0.85
CAST-232ENST00000510500 KIF4AO95239 1232 aa9.73□□□□□ -0.85
CAST-232ENST00000510500 RHBDL3P58872 404 aa9.73□□□□□ -0.85
CAST-232ENST00000510500 RNF25Q96BH1 459 aaPredicted RBP9.73□□□□□ -0.85
CAST-232ENST00000510500 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
CAST-232ENST00000510500 ZBTB47Q9UFB7 747 aaPredicted RBP9.73□□□□□ -0.85
CAST-232ENST00000510500 FRMD4BQ9Y2L6 1034 aa9.73□□□□□ -0.85
CAST-232ENST00000510500 SBNO2Q9Y2G9 1366 aa9.73□□□□□ -0.85
CAST-232ENST00000510500 EPB41L2O43491 1005 aaKnown RBP9.72□□□□□ -0.85
CAST-232ENST00000510500 SKIV2LQ15477 1246 aaKnown RBP9.72□□□□□ -0.85
CAST-232ENST00000510500 ILDR1Q86SU0 546 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 998.5 ms