RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 TRAK1Q9UPV9 953 aa28.93■■■□□ 2.22
HOXC6-204ENST00000509328 ARHGEF28Q8N1W1 1705 aaKnown RBP28.93■■■□□ 2.22
HOXC6-204ENST00000509328 ROBO1Q9Y6N7 1651 aa28.92■■■□□ 2.22
HOXC6-204ENST00000509328 CDC42BPGQ6DT37 1551 aa28.9■■■□□ 2.22
HOXC6-204ENST00000509328 PRAM1Q96QH2 718 aa28.9■■■□□ 2.22
HOXC6-204ENST00000509328 POGKQ9P215 609 aa28.89■■■□□ 2.22
HOXC6-204ENST00000509328 NBPF8Q3BBV2 869 aa28.88■■■□□ 2.21
HOXC6-204ENST00000509328 MST1RQ04912 1400 aa28.87■■■□□ 2.21
HOXC6-204ENST00000509328 TIMELESSQ9UNS1 1208 aa28.86■■■□□ 2.21
HOXC6-204ENST00000509328 ROCK2O75116 1388 aaKnown RBP28.84■■■□□ 2.21
HOXC6-204ENST00000509328 SAFB2Q14151 953 aaKnown RBP eCLIP28.83■■■□□ 2.21
HOXC6-204ENST00000509328 FMN2Q9NZ56 1722 aa28.82■■■□□ 2.2
HOXC6-204ENST00000509328 ADGRB2O60241 1585 aa28.81■■■□□ 2.2
HOXC6-204ENST00000509328 HSPA1LP34931 641 aa28.81■■■□□ 2.2
HOXC6-204ENST00000509328 RALGAPBQ86X10 1494 aa28.8■■■□□ 2.2
HOXC6-204ENST00000509328 C1orf167Q5SNV9 1468 aa28.79■■■□□ 2.2
HOXC6-204ENST00000509328 GPRASP1Q5JY77 1395 aa28.78■■■□□ 2.2
HOXC6-204ENST00000509328 BRINP3Q76B58 766 aa28.76■■■□□ 2.19
HOXC6-204ENST00000509328 MINK1Q8N4C8 1332 aaPredicted RBP28.75■■■□□ 2.19
HOXC6-204ENST00000509328 PHLPP1O60346 1717 aa28.75■■■□□ 2.19
HOXC6-204ENST00000509328 QRICH2Q9H0J4 1663 aa28.73■■■□□ 2.19
HOXC6-204ENST00000509328 RGPD8O14715 1765 aaPredicted RBP28.73■■■□□ 2.19
HOXC6-204ENST00000509328 AHDC1Q5TGY3 1603 aaPredicted RBP28.72■■■□□ 2.19
HOXC6-204ENST00000509328 CENPJQ9HC77 1338 aaPredicted RBP28.71■■■□□ 2.19
HOXC6-204ENST00000509328 HIRIP3Q9BW71 556 aaPredicted RBP28.71■■■□□ 2.19
HOXC6-204ENST00000509328 CARD11Q9BXL7 1154 aa28.71■■■□□ 2.19
HOXC6-204ENST00000509328 NHSL1Q5SYE7 1610 aa28.71■■■□□ 2.19
HOXC6-204ENST00000509328 EIF3AQ14152 1382 aaKnown RBP28.7■■■□□ 2.18
HOXC6-204ENST00000509328 NUTM2FA1L443 756 aa28.68■■■□□ 2.18
HOXC6-204ENST00000509328 ORAI2Q96SN7 254 aa28.68■■■□□ 2.18
HOXC6-204ENST00000509328 WASLO00401 505 aaPredicted RBP28.67■■■□□ 2.18
HOXC6-204ENST00000509328 COL16A1Q07092 1604 aaPredicted RBP28.66■■■□□ 2.18
HOXC6-204ENST00000509328 USP32Q8NFA0 1604 aa28.66■■■□□ 2.18
HOXC6-204ENST00000509328 ANKARQ7Z5J8 1434 aa28.66■■■□□ 2.18
HOXC6-204ENST00000509328 ESCO1Q5FWF5 840 aa28.65■■■□□ 2.18
HOXC6-204ENST00000509328 KIF1AQ12756 1690 aa28.64■■■□□ 2.18
HOXC6-204ENST00000509328 TULP4Q9NRJ4 1543 aa28.64■■■□□ 2.18
HOXC6-204ENST00000509328 ITSN1Q15811 1721 aa28.6■■■□□ 2.17
HOXC6-204ENST00000509328 CDK19Q9BWU1 502 aa28.59■■■□□ 2.17
HOXC6-204ENST00000509328 DDX17Q92841 729 aaKnown RBP28.57■■■□□ 2.16
HOXC6-204ENST00000509328 PRR36Q9H6K5 1346 aa28.56■■■□□ 2.16
HOXC6-204ENST00000509328 PHF8Q9UPP1 1060 aa28.56■■■□□ 2.16
HOXC6-204ENST00000509328 ATP7BP35670 1465 aa28.55■■■□□ 2.16
HOXC6-204ENST00000509328 NPHP3Q7Z494 1330 aa28.55■■■□□ 2.16
HOXC6-204ENST00000509328 SBNO2Q9Y2G9 1366 aa28.54■■■□□ 2.16
HOXC6-204ENST00000509328 JCADQ9P266 1359 aa28.53■■■□□ 2.16
HOXC6-204ENST00000509328 FOXO3O43524 673 aa28.53■■■□□ 2.16
HOXC6-204ENST00000509328 NUDT16Q96DE0 195 aaKnown RBP28.53■■■□□ 2.16
HOXC6-204ENST00000509328 SHPRHQ149N8 1683 aa28.53■■■□□ 2.16
HOXC6-204ENST00000509328 TOPAZ1Q8N9V7 1692 aa28.53■■■□□ 2.16
HOXC6-204ENST00000509328 SOS2Q07890 1332 aaPredicted RBP28.52■■■□□ 2.16
HOXC6-204ENST00000509328 EVC2Q86UK5 1308 aa28.52■■■□□ 2.16
HOXC6-204ENST00000509328 SRPK2P78362 688 aaKnown RBP28.51■■■□□ 2.15
HOXC6-204ENST00000509328 LRRC59Q96AG4 307 aaKnown RBP28.51■■■□□ 2.15
HOXC6-204ENST00000509328 PXDNQ92626 1479 aa28.5■■■□□ 2.15
HOXC6-204ENST00000509328 USP47Q96K76 1375 aa28.49■■■□□ 2.15
HOXC6-204ENST00000509328 PMFBP1Q8TBY8 1022 aa28.48■■■□□ 2.15
HOXC6-204ENST00000509328 CABP2Q9NPB3 220 aa28.47■■■□□ 2.15
HOXC6-204ENST00000509328 CCDC61Q9Y6R9 512 aa28.47■■■□□ 2.15
HOXC6-204ENST00000509328 ST20-MTHFSA0A0A6YYL1 179 aa28.46■■■□□ 2.15
HOXC6-204ENST00000509328 XPCQ01831 940 aaPredicted RBP28.44■■■□□ 2.14
HOXC6-204ENST00000509328 MED1Q15648 1581 aaPredicted RBP28.43■■■□□ 2.14
HOXC6-204ENST00000509328 KRT28Q7Z3Y7 464 aa28.43■■■□□ 2.14
HOXC6-204ENST00000509328 PSME1Q06323 249 aa28.42■■■□□ 2.14
HOXC6-204ENST00000509328 PNPLA6Q8IY17 1366 aa28.41■■■□□ 2.14
HOXC6-204ENST00000509328 SLC24A1O60721 1099 aa28.41■■■□□ 2.14
HOXC6-204ENST00000509328 NGDNQ8NEJ9 315 aaKnown RBP28.41■■■□□ 2.14
HOXC6-204ENST00000509328 TESK2Q96S53 571 aa28.41■■■□□ 2.14
HOXC6-204ENST00000509328 PPIP5K1Q6PFW1 1433 aa28.41■■■□□ 2.14
HOXC6-204ENST00000509328 SPATA31A6Q5VVP1 1343 aa28.41■■■□□ 2.14
HOXC6-204ENST00000509328 PLEKHG3A1L390 1219 aa28.4■■■□□ 2.14
HOXC6-204ENST00000509328 TRPM3Q9HCF6 1732 aaPredicted RBP28.39■■■□□ 2.14
HOXC6-204ENST00000509328 COL22A1Q8NFW1 1626 aaPredicted RBP28.38■■■□□ 2.13
HOXC6-204ENST00000509328 SBNO1A3KN83 1393 aa28.37■■■□□ 2.13
HOXC6-204ENST00000509328 POLR3AO14802 1390 aaPredicted RBP28.37■■■□□ 2.13
HOXC6-204ENST00000509328 ATAD2Q6PL18 1390 aa28.37■■■□□ 2.13
HOXC6-204ENST00000509328 SPATA31A3Q5VYP0 1347 aa28.36■■■□□ 2.13
HOXC6-204ENST00000509328 ACEP12821 1306 aa28.35■■■□□ 2.13
HOXC6-204ENST00000509328 TNS3Q68CZ2 1445 aa28.35■■■□□ 2.13
HOXC6-204ENST00000509328 PUS7Q96PZ0 661 aaKnown RBP28.33■■■□□ 2.13
HOXC6-204ENST00000509328 CABP1Q9NZU7 370 aa28.33■■■□□ 2.13
HOXC6-204ENST00000509328 ALS2Q96Q42 1657 aa28.32■■■□□ 2.12
HOXC6-204ENST00000509328 LRP6O75581 1613 aa28.31■■■□□ 2.12
HOXC6-204ENST00000509328 EIF4G2P78344 907 aaKnown RBP eCLIP28.3■■■□□ 2.12
HOXC6-204ENST00000509328 TMF1P82094 1093 aa28.3■■■□□ 2.12
HOXC6-204ENST00000509328 AKAP12Q02952 1782 aa28.29■■■□□ 2.12
HOXC6-204ENST00000509328 ARHGEF10O15013 1369 aa28.28■■■□□ 2.12
HOXC6-204ENST00000509328 NUTM2BA6NNL0 878 aaPredicted RBP28.28■■■□□ 2.12
HOXC6-204ENST00000509328 NUTM2EB1AL46 878 aaPredicted RBP28.28■■■□□ 2.12
HOXC6-204ENST00000509328 NUTM2AQ8IVF1 878 aaPredicted RBP28.28■■■□□ 2.12
HOXC6-204ENST00000509328 DISP3Q9P2K9 1392 aa28.26■■■□□ 2.12
HOXC6-204ENST00000509328 PAK3O75914 559 aaPredicted RBP28.25■■■□□ 2.11
HOXC6-204ENST00000509328 LMOD2Q6P5Q4 547 aa28.25■■■□□ 2.11
HOXC6-204ENST00000509328 BRD4O60885 1362 aaPredicted RBP28.24■■■□□ 2.11
HOXC6-204ENST00000509328 HSPA5P11021 654 aaKnown RBP28.24■■■□□ 2.11
HOXC6-204ENST00000509328 CDCA8Q53HL2 280 aa28.23■■■□□ 2.11
HOXC6-204ENST00000509328 MEX3CQ5U5Q3 659 aaKnown RBP28.23■■■□□ 2.11
HOXC6-204ENST00000509328 USP6P35125 1406 aa28.23■■■□□ 2.11
HOXC6-204ENST00000509328 MARF1Q9Y4F3 1742 aaKnown RBP28.23■■■□□ 2.11
HOXC6-204ENST00000509328 ABCA3Q99758 1704 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms