RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 TMEM132AQ24JP5 1023 aa10.08□□□□□ -0.8
CALCOCO2-212ENST00000509014 MORN1Q5T089 497 aa10.08□□□□□ -0.8
CALCOCO2-212ENST00000509014 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
CALCOCO2-212ENST00000509014 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
CALCOCO2-212ENST00000509014 BLOC1S3Q6QNY0 202 aa10.07□□□□□ -0.8
CALCOCO2-212ENST00000509014 GOPCQ9HD26 462 aa10.07□□□□□ -0.8
CALCOCO2-212ENST00000509014 LIMD1Q9UGP4 676 aa10.07□□□□□ -0.8
CALCOCO2-212ENST00000509014 PCDHB3Q9Y5E6 796 aa10.07□□□□□ -0.8
CALCOCO2-212ENST00000509014 SPTLC1O15269 473 aa10.06□□□□□ -0.8
CALCOCO2-212ENST00000509014 SKIV2LQ15477 1246 aaKnown RBP10.06□□□□□ -0.8
CALCOCO2-212ENST00000509014 GJA5P36382 358 aa10.05□□□□□ -0.8
CALCOCO2-212ENST00000509014 RIC3Q7Z5B4 369 aa10.05□□□□□ -0.8
CALCOCO2-212ENST00000509014 POLR3EQ9NVU0 708 aa10.05□□□□□ -0.8
CALCOCO2-212ENST00000509014 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
CALCOCO2-212ENST00000509014 PDS5BQ9NTI5 1447 aa10.05□□□□□ -0.8
CALCOCO2-212ENST00000509014 BAZ1AQ9NRL2 1556 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-212ENST00000509014 CLK2P49760 499 aaKnown RBP10.04□□□□□ -0.8
CALCOCO2-212ENST00000509014 TJAP1Q5JTD0 557 aa10.04□□□□□ -0.8
CALCOCO2-212ENST00000509014 MTRQ99707 1265 aa10.04□□□□□ -0.8
CALCOCO2-212ENST00000509014 SLC27A5Q9Y2P5 690 aa10.04□□□□□ -0.8
CALCOCO2-212ENST00000509014 ITGBL1O95965 494 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-212ENST00000509014 FDX1P10109 184 aa10.03□□□□□ -0.8
CALCOCO2-212ENST00000509014 COPS2P61201 443 aa10.03□□□□□ -0.8
CALCOCO2-212ENST00000509014 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
CALCOCO2-212ENST00000509014 PROCA1Q8NCQ7 364 aaPredicted RBP10.03□□□□□ -0.8
CALCOCO2-212ENST00000509014 PCDHB15Q9Y5E8 787 aa10.03□□□□□ -0.8
CALCOCO2-212ENST00000509014 WDR62O43379 1518 aa10.02□□□□□ -0.8
CALCOCO2-212ENST00000509014 TUSC1Q2TAM9 212 aa10.02□□□□□ -0.81
CALCOCO2-212ENST00000509014 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.02□□□□□ -0.81
CALCOCO2-212ENST00000509014 FBXO31Q5XUX0 539 aaPredicted RBP10.01□□□□□ -0.81
CALCOCO2-212ENST00000509014 SCUBE3Q8IX30 993 aa10.01□□□□□ -0.81
CALCOCO2-212ENST00000509014 MRC2Q9UBG0 1479 aa10.01□□□□□ -0.81
CALCOCO2-212ENST00000509014 NR1I2O75469 434 aa10□□□□□ -0.81
CALCOCO2-212ENST00000509014 ZNF516Q92618 1163 aa10□□□□□ -0.81
CALCOCO2-212ENST00000509014 THAP11Q96EK4 314 aa10□□□□□ -0.81
CALCOCO2-212ENST00000509014 QPCTQ16769 361 aa9.99□□□□□ -0.81
CALCOCO2-212ENST00000509014 RNF19BQ6ZMZ0 732 aa9.99□□□□□ -0.81
CALCOCO2-212ENST00000509014 PCMTD1Q96MG8 357 aaPredicted RBP9.99□□□□□ -0.81
CALCOCO2-212ENST00000509014 MROH2BQ7Z745 1585 aa9.98□□□□□ -0.81
CALCOCO2-212ENST00000509014 ZPR1O75312 459 aa9.98□□□□□ -0.81
CALCOCO2-212ENST00000509014 CSPP1Q1MSJ5 1256 aa9.98□□□□□ -0.81
CALCOCO2-212ENST00000509014 IL21Q9HBE4 155 aa9.98□□□□□ -0.81
CALCOCO2-212ENST00000509014 TLL1O43897 1013 aa9.97□□□□□ -0.81
CALCOCO2-212ENST00000509014 LILRB3O75022 631 aa9.97□□□□□ -0.81
CALCOCO2-212ENST00000509014 KCNC4Q03721 635 aa9.97□□□□□ -0.81
CALCOCO2-212ENST00000509014 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
CALCOCO2-212ENST00000509014 CABLES1Q8TDN4 633 aa9.97□□□□□ -0.81
CALCOCO2-212ENST00000509014 SYMPKQ92797 1274 aaKnown RBP9.97□□□□□ -0.81
CALCOCO2-212ENST00000509014 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
CALCOCO2-212ENST00000509014 CADPSQ9ULU8 1353 aa9.97□□□□□ -0.81
CALCOCO2-212ENST00000509014 HRCP23327 699 aa9.95□□□□□ -0.82
CALCOCO2-212ENST00000509014 Q3C1V9 767 aa9.95□□□□□ -0.82
CALCOCO2-212ENST00000509014 PRPF38BQ5VTL8 546 aaKnown RBP9.95□□□□□ -0.82
CALCOCO2-212ENST00000509014 Q6ZNB5 142 aa9.95□□□□□ -0.82
CALCOCO2-212ENST00000509014 MTMR2Q13614 643 aa9.94□□□□□ -0.82
CALCOCO2-212ENST00000509014 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
CALCOCO2-212ENST00000509014 ZBTB3Q9H5J0 574 aa9.94□□□□□ -0.82
CALCOCO2-212ENST00000509014 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
CALCOCO2-212ENST00000509014 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
CALCOCO2-212ENST00000509014 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
CALCOCO2-212ENST00000509014 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
CALCOCO2-212ENST00000509014 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
CALCOCO2-212ENST00000509014 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
CALCOCO2-212ENST00000509014 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
CALCOCO2-212ENST00000509014 RETREG3Q86VR2 466 aa9.92□□□□□ -0.82
CALCOCO2-212ENST00000509014 ADH1BP00325 375 aa9.91□□□□□ -0.82
CALCOCO2-212ENST00000509014 FAM160A2Q8N612 972 aaPredicted RBP9.91□□□□□ -0.82
CALCOCO2-212ENST00000509014 SPSB2Q99619 263 aa9.91□□□□□ -0.82
CALCOCO2-212ENST00000509014 USB1Q9BQ65 265 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-212ENST00000509014 SPDYE5A6NIY4 337 aa9.9□□□□□ -0.82
CALCOCO2-212ENST00000509014 CFAP99D6REC4 459 aa9.9□□□□□ -0.82
CALCOCO2-212ENST00000509014 ATP1B4Q9UN42 357 aaPredicted RBP9.9□□□□□ -0.82
CALCOCO2-212ENST00000509014 CEP164Q9UPV0 1460 aa9.9□□□□□ -0.83
CALCOCO2-212ENST00000509014 RFC5P40937 340 aa9.89□□□□□ -0.83
CALCOCO2-212ENST00000509014 MSS51Q4VC12 460 aa9.89□□□□□ -0.83
CALCOCO2-212ENST00000509014 PRDM9Q9NQV7 894 aa9.89□□□□□ -0.83
CALCOCO2-212ENST00000509014 WIZO95785 1651 aa9.88□□□□□ -0.83
CALCOCO2-212ENST00000509014 NUTM2BA6NNL0 878 aaPredicted RBP9.88□□□□□ -0.83
CALCOCO2-212ENST00000509014 NUTM2EB1AL46 878 aaPredicted RBP9.88□□□□□ -0.83
CALCOCO2-212ENST00000509014 NUTM2DQ5VT03 806 aaPredicted RBP9.88□□□□□ -0.83
CALCOCO2-212ENST00000509014 NUTM2AQ8IVF1 878 aaPredicted RBP9.88□□□□□ -0.83
CALCOCO2-212ENST00000509014 PRR7Q8TB68 274 aa9.88□□□□□ -0.83
CALCOCO2-212ENST00000509014 FANCD2Q9BXW9 1451 aa9.86□□□□□ -0.83
CALCOCO2-212ENST00000509014 URB2Q14146 1524 aaKnown RBP9.84□□□□□ -0.83
CALCOCO2-212ENST00000509014 DXOO77932 396 aaKnown RBP9.84□□□□□ -0.83
CALCOCO2-212ENST00000509014 S1PR4O95977 384 aa9.84□□□□□ -0.83
CALCOCO2-212ENST00000509014 MMP16P51512 607 aa9.84□□□□□ -0.83
CALCOCO2-212ENST00000509014 SLC6A16Q9GZN6 736 aa9.84□□□□□ -0.83
CALCOCO2-212ENST00000509014 ARHGEF11O15085 1522 aa9.83□□□□□ -0.84
CALCOCO2-212ENST00000509014 JUNDP17535 347 aa9.83□□□□□ -0.84
CALCOCO2-212ENST00000509014 DESI1Q6ICB0 168 aa9.83□□□□□ -0.84
CALCOCO2-212ENST00000509014 CFTRP13569 1480 aa9.81□□□□□ -0.84
CALCOCO2-212ENST00000509014 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
CALCOCO2-212ENST00000509014 GFRA3O60609 400 aa9.81□□□□□ -0.84
CALCOCO2-212ENST00000509014 CTDSPL2Q05D32 466 aa9.81□□□□□ -0.84
CALCOCO2-212ENST00000509014 AP1G2O75843 785 aa9.8□□□□□ -0.84
CALCOCO2-212ENST00000509014 LAPTM4AQ15012 233 aa9.8□□□□□ -0.84
CALCOCO2-212ENST00000509014 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
CALCOCO2-212ENST00000509014 TSC1Q92574 1164 aa9.8□□□□□ -0.84
CALCOCO2-212ENST00000509014 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms