RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 LILRB3O75022 631 aa12.1□□□□□ -0.47
GYPB-210ENST00000508841 RFC5P40937 340 aa12.09□□□□□ -0.47
GYPB-210ENST00000508841 BANK1Q8NDB2 785 aa12.09□□□□□ -0.47
GYPB-210ENST00000508841 NUTM2BA6NNL0 878 aaPredicted RBP12.08□□□□□ -0.48
GYPB-210ENST00000508841 NUTM2EB1AL46 878 aaPredicted RBP12.08□□□□□ -0.48
GYPB-210ENST00000508841 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
GYPB-210ENST00000508841 Q3C1V9 767 aa12.08□□□□□ -0.48
GYPB-210ENST00000508841 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
GYPB-210ENST00000508841 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
GYPB-210ENST00000508841 GFRA3O60609 400 aa12.07□□□□□ -0.48
GYPB-210ENST00000508841 MTMR2Q13614 643 aa12.07□□□□□ -0.48
GYPB-210ENST00000508841 TRAF7Q6Q0C0 670 aa12.07□□□□□ -0.48
GYPB-210ENST00000508841 LCE2BO14633 110 aa12.06□□□□□ -0.48
GYPB-210ENST00000508841 MORN1Q5T089 497 aa12.06□□□□□ -0.48
GYPB-210ENST00000508841 PCDHB15Q9Y5E8 787 aa12.06□□□□□ -0.48
GYPB-210ENST00000508841 HRCP23327 699 aa12.05□□□□□ -0.48
GYPB-210ENST00000508841 PCDHB3Q9Y5E6 796 aa12.05□□□□□ -0.48
GYPB-210ENST00000508841 NR1I2O75469 434 aa12.04□□□□□ -0.48
GYPB-210ENST00000508841 APLP1P51693 650 aa12.04□□□□□ -0.48
GYPB-210ENST00000508841 QPCTQ16769 361 aa12.04□□□□□ -0.48
GYPB-210ENST00000508841 PCDHGC3Q9UN70 934 aa12.04□□□□□ -0.48
GYPB-210ENST00000508841 GUCA2AQ02747 115 aa12.03□□□□□ -0.48
GYPB-210ENST00000508841 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
GYPB-210ENST00000508841 C6orf229H3BNL8 230 aa12.02□□□□□ -0.49
GYPB-210ENST00000508841 APBB1O00213 710 aa12.02□□□□□ -0.49
GYPB-210ENST00000508841 SOCS7O14512 581 aa12.02□□□□□ -0.49
GYPB-210ENST00000508841 HLA-CQ95604 372 aa12.02□□□□□ -0.49
GYPB-210ENST00000508841 MCM6Q14566 821 aa12.01□□□□□ -0.49
GYPB-210ENST00000508841 HELBQ8NG08 1087 aaPredicted RBP12.01□□□□□ -0.49
GYPB-210ENST00000508841 CABLES1Q8TDN4 633 aa12.01□□□□□ -0.49
GYPB-210ENST00000508841 PUS10Q3MIT2 529 aaKnown RBP12□□□□□ -0.49
GYPB-210ENST00000508841 RETREG3Q86VR2 466 aa12□□□□□ -0.49
GYPB-210ENST00000508841 SLC27A5Q9Y2P5 690 aa12□□□□□ -0.49
GYPB-210ENST00000508841 RTL5Q5HYW3 569 aaPredicted RBP11.99□□□□□ -0.49
GYPB-210ENST00000508841 FMNL1O95466 1100 aaPredicted RBP11.97□□□□□ -0.49
GYPB-210ENST00000508841 AP1G2O75843 785 aa11.96□□□□□ -0.49
GYPB-210ENST00000508841 UBTFP17480 764 aaKnown RBP11.96□□□□□ -0.49
GYPB-210ENST00000508841 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.49
GYPB-210ENST00000508841 SCUBE3Q8IX30 993 aa11.96□□□□□ -0.49
GYPB-210ENST00000508841 ZMYND15Q9H091 742 aa11.96□□□□□ -0.49
GYPB-210ENST00000508841 PRM3Q9NNZ6 103 aa11.96□□□□□ -0.49
GYPB-210ENST00000508841 NRG2O14511 850 aaPredicted RBP11.95□□□□□ -0.5
GYPB-210ENST00000508841 DESI1Q6ICB0 168 aa11.95□□□□□ -0.5
GYPB-210ENST00000508841 BLOC1S3Q6QNY0 202 aa11.95□□□□□ -0.5
GYPB-210ENST00000508841 PRKD2Q9BZL6 878 aa11.95□□□□□ -0.5
GYPB-210ENST00000508841 PRR7Q8TB68 274 aa11.94□□□□□ -0.5
GYPB-210ENST00000508841 USB1Q9BQ65 265 aaKnown RBP11.94□□□□□ -0.5
GYPB-210ENST00000508841 RAD21O60216 631 aa11.93□□□□□ -0.5
GYPB-210ENST00000508841 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
GYPB-210ENST00000508841 BRICD5Q6PL45 260 aa11.93□□□□□ -0.5
GYPB-210ENST00000508841 CFAP99D6REC4 459 aa11.91□□□□□ -0.5
GYPB-210ENST00000508841 TSC1Q92574 1164 aa11.91□□□□□ -0.5
GYPB-210ENST00000508841 THAP11Q96EK4 314 aa11.91□□□□□ -0.5
GYPB-210ENST00000508841 A6NJR5 290 aa11.9□□□□□ -0.5
GYPB-210ENST00000508841 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
GYPB-210ENST00000508841 SYMPKQ92797 1274 aaKnown RBP11.9□□□□□ -0.5
GYPB-210ENST00000508841 COPS2P61201 443 aa11.89□□□□□ -0.51
GYPB-210ENST00000508841 TJAP1Q5JTD0 557 aa11.89□□□□□ -0.51
GYPB-210ENST00000508841 IL21Q9HBE4 155 aa11.89□□□□□ -0.51
GYPB-210ENST00000508841 SNRKQ9NRH2 765 aa11.89□□□□□ -0.51
GYPB-210ENST00000508841 MSS51Q4VC12 460 aa11.88□□□□□ -0.51
GYPB-210ENST00000508841 ZPR1O75312 459 aa11.87□□□□□ -0.51
GYPB-210ENST00000508841 CTDSPL2Q05D32 466 aa11.87□□□□□ -0.51
GYPB-210ENST00000508841 MTMR14Q8NCE2 650 aa11.87□□□□□ -0.51
GYPB-210ENST00000508841 SPSB2Q99619 263 aa11.87□□□□□ -0.51
GYPB-210ENST00000508841 MTRQ99707 1265 aa11.87□□□□□ -0.51
GYPB-210ENST00000508841 V9GY48 417 aaPredicted RBP11.87□□□□□ -0.51
GYPB-210ENST00000508841 ZNF787Q6DD87 383 aa11.86□□□□□ -0.51
GYPB-210ENST00000508841 PPP1R18Q6NYC8 613 aa11.86□□□□□ -0.51
GYPB-210ENST00000508841 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
GYPB-210ENST00000508841 ADH1BP00325 375 aa11.84□□□□□ -0.51
GYPB-210ENST00000508841 JUNDP17535 347 aa11.84□□□□□ -0.51
GYPB-210ENST00000508841 LYPD8Q6UX82 237 aa11.83□□□□□ -0.52
GYPB-210ENST00000508841 PNMA1Q8ND90 353 aa11.83□□□□□ -0.52
GYPB-210ENST00000508841 NDUFB9Q9Y6M9 179 aa11.83□□□□□ -0.52
GYPB-210ENST00000508841 PTPRNQ16849 979 aa11.82□□□□□ -0.52
GYPB-210ENST00000508841 COG6Q9Y2V7 657 aa11.82□□□□□ -0.52
GYPB-210ENST00000508841 MMP16P51512 607 aa11.8□□□□□ -0.52
GYPB-210ENST00000508841 PROSER2Q86WR7 435 aaPredicted RBP11.8□□□□□ -0.52
GYPB-210ENST00000508841 CLUAP1Q96AJ1 413 aa11.8□□□□□ -0.52
GYPB-210ENST00000508841 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
GYPB-210ENST00000508841 PDZRN3Q9UPQ7 1066 aa11.8□□□□□ -0.52
GYPB-210ENST00000508841 DXOO77932 396 aaKnown RBP11.79□□□□□ -0.52
GYPB-210ENST00000508841 LRRN4Q8WUT4 740 aa11.79□□□□□ -0.52
GYPB-210ENST00000508841 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
GYPB-210ENST00000508841 FAM160A2Q8N612 972 aaPredicted RBP11.78□□□□□ -0.52
GYPB-210ENST00000508841 SLC6A16Q9GZN6 736 aa11.77□□□□□ -0.53
GYPB-210ENST00000508841 HMX1Q9NP08 348 aaPredicted RBP11.77□□□□□ -0.53
GYPB-210ENST00000508841 PER1O15534 1290 aaPredicted RBP11.76□□□□□ -0.53
GYPB-210ENST00000508841 TLL1O43897 1013 aa11.76□□□□□ -0.53
GYPB-210ENST00000508841 TRAK2O60296 914 aa11.76□□□□□ -0.53
GYPB-210ENST00000508841 ZNF516Q92618 1163 aa11.76□□□□□ -0.53
GYPB-210ENST00000508841 ZNF775Q96BV0 537 aaPredicted RBP11.76□□□□□ -0.53
GYPB-210ENST00000508841 POM121Q96HA1 1249 aa11.76□□□□□ -0.53
GYPB-210ENST00000508841 GDPD2Q9HCC8 539 aa11.76□□□□□ -0.53
GYPB-210ENST00000508841 CCNYL3P0C7X3 344 aa11.75□□□□□ -0.53
GYPB-210ENST00000508841 TRIM34Q9BYJ4 488 aa11.75□□□□□ -0.53
GYPB-210ENST00000508841 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
GYPB-210ENST00000508841 TBC1D2BQ9UPU7 963 aa11.74□□□□□ -0.53
GYPB-210ENST00000508841 F12P00748 615 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms