RNA–Protein interactions for RNA: ENST00000508620.5

PAPD4-211, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-211ENST00000508620 NBPF1Q3BBV0 1214 aa23.3■■□□□ 1.32
PAPD4-211ENST00000508620 PRAM1Q96QH2 718 aa23.3■■□□□ 1.32
PAPD4-211ENST00000508620 CLSPNQ9HAW4 1339 aa23.3■■□□□ 1.32
PAPD4-211ENST00000508620 MST1RQ04912 1400 aa23.27■■□□□ 1.32
PAPD4-211ENST00000508620 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
PAPD4-211ENST00000508620 TRPM1Q7Z4N2 1603 aa23.24■■□□□ 1.31
PAPD4-211ENST00000508620 NBPF8Q3BBV2 869 aa23.24■■□□□ 1.31
PAPD4-211ENST00000508620 CCER1Q8TC90 406 aaPredicted RBP23.24■■□□□ 1.31
PAPD4-211ENST00000508620 CDC42BPGQ6DT37 1551 aa23.23■■□□□ 1.31
PAPD4-211ENST00000508620 ARHGEF28Q8N1W1 1705 aaKnown RBP23.23■■□□□ 1.31
PAPD4-211ENST00000508620 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
PAPD4-211ENST00000508620 C1orf167Q5SNV9 1468 aa23.22■■□□□ 1.31
PAPD4-211ENST00000508620 PHLPP1O60346 1717 aa23.2■■□□□ 1.3
PAPD4-211ENST00000508620 TIMELESSQ9UNS1 1208 aa23.19■■□□□ 1.3
PAPD4-211ENST00000508620 FMN2Q9NZ56 1722 aa23.18■■□□□ 1.3
PAPD4-211ENST00000508620 ROCK2O75116 1388 aaKnown RBP23.17■■□□□ 1.3
PAPD4-211ENST00000508620 MINK1Q8N4C8 1332 aaPredicted RBP23.17■■□□□ 1.3
PAPD4-211ENST00000508620 ORAI2Q96SN7 254 aa23.17■■□□□ 1.3
PAPD4-211ENST00000508620 NUTM2FA1L443 756 aa23.16■■□□□ 1.3
PAPD4-211ENST00000508620 RGPD8O14715 1765 aaPredicted RBP23.15■■□□□ 1.3
PAPD4-211ENST00000508620 ESCO1Q5FWF5 840 aa23.15■■□□□ 1.3
PAPD4-211ENST00000508620 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
PAPD4-211ENST00000508620 AHDC1Q5TGY3 1603 aaPredicted RBP23.15■■□□□ 1.3
PAPD4-211ENST00000508620 ADGRB2O60241 1585 aa23.14■■□□□ 1.29
PAPD4-211ENST00000508620 NHSL1Q5SYE7 1610 aa23.13■■□□□ 1.29
PAPD4-211ENST00000508620 WASLO00401 505 aaPredicted RBP23.12■■□□□ 1.29
PAPD4-211ENST00000508620 GPRASP1Q5JY77 1395 aa23.12■■□□□ 1.29
PAPD4-211ENST00000508620 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
PAPD4-211ENST00000508620 CARD11Q9BXL7 1154 aa23.1■■□□□ 1.29
PAPD4-211ENST00000508620 COL16A1Q07092 1604 aaPredicted RBP23.1■■□□□ 1.29
PAPD4-211ENST00000508620 DDX17Q92841 729 aaKnown RBP23.09■■□□□ 1.29
PAPD4-211ENST00000508620 RALGAPBQ86X10 1494 aa23.09■■□□□ 1.29
PAPD4-211ENST00000508620 EIF3AQ14152 1382 aaKnown RBP23.07■■□□□ 1.28
PAPD4-211ENST00000508620 JCADQ9P266 1359 aa23.06■■□□□ 1.28
PAPD4-211ENST00000508620 LRRC59Q96AG4 307 aaKnown RBP23.06■■□□□ 1.28
PAPD4-211ENST00000508620 CDK19Q9BWU1 502 aa23.06■■□□□ 1.28
PAPD4-211ENST00000508620 ANKARQ7Z5J8 1434 aa23.06■■□□□ 1.28
PAPD4-211ENST00000508620 QRICH2Q9H0J4 1663 aa23.06■■□□□ 1.28
PAPD4-211ENST00000508620 PHF8Q9UPP1 1060 aa23.05■■□□□ 1.28
PAPD4-211ENST00000508620 NPHP3Q7Z494 1330 aa23.05■■□□□ 1.28
PAPD4-211ENST00000508620 USP32Q8NFA0 1604 aa23.04■■□□□ 1.28
PAPD4-211ENST00000508620 KIF1AQ12756 1690 aa23.04■■□□□ 1.28
PAPD4-211ENST00000508620 FOXO3O43524 673 aa23.04■■□□□ 1.28
PAPD4-211ENST00000508620 SOS2Q07890 1332 aaPredicted RBP23.04■■□□□ 1.28
PAPD4-211ENST00000508620 TULP4Q9NRJ4 1543 aa23.03■■□□□ 1.28
PAPD4-211ENST00000508620 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
PAPD4-211ENST00000508620 NUDT16Q96DE0 195 aaKnown RBP23.01■■□□□ 1.27
PAPD4-211ENST00000508620 SHPRHQ149N8 1683 aa23■■□□□ 1.27
PAPD4-211ENST00000508620 PMFBP1Q8TBY8 1022 aa22.99■■□□□ 1.27
PAPD4-211ENST00000508620 ITSN1Q15811 1721 aa22.98■■□□□ 1.27
PAPD4-211ENST00000508620 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
PAPD4-211ENST00000508620 XPCQ01831 940 aaPredicted RBP22.97■■□□□ 1.27
PAPD4-211ENST00000508620 KRT28Q7Z3Y7 464 aa22.97■■□□□ 1.27
PAPD4-211ENST00000508620 EVC2Q86UK5 1308 aa22.97■■□□□ 1.27
PAPD4-211ENST00000508620 MED1Q15648 1581 aaPredicted RBP22.97■■□□□ 1.27
PAPD4-211ENST00000508620 PSME1Q06323 249 aa22.96■■□□□ 1.27
PAPD4-211ENST00000508620 CCDC61Q9Y6R9 512 aa22.96■■□□□ 1.27
PAPD4-211ENST00000508620 SPATA31A6Q5VVP1 1343 aa22.96■■□□□ 1.27
PAPD4-211ENST00000508620 PXDNQ92626 1479 aa22.96■■□□□ 1.27
PAPD4-211ENST00000508620 ATP7BP35670 1465 aa22.95■■□□□ 1.26
PAPD4-211ENST00000508620 CABP2Q9NPB3 220 aa22.95■■□□□ 1.26
PAPD4-211ENST00000508620 DISP3Q9P2K9 1392 aa22.94■■□□□ 1.26
PAPD4-211ENST00000508620 NGDNQ8NEJ9 315 aaKnown RBP22.94■■□□□ 1.26
PAPD4-211ENST00000508620 PNPLA6Q8IY17 1366 aa22.92■■□□□ 1.26
PAPD4-211ENST00000508620 SBNO2Q9Y2G9 1366 aa22.91■■□□□ 1.26
PAPD4-211ENST00000508620 PLEKHG3A1L390 1219 aa22.91■■□□□ 1.26
PAPD4-211ENST00000508620 TOPAZ1Q8N9V7 1692 aa22.9■■□□□ 1.26
PAPD4-211ENST00000508620 ST20-MTHFSA0A0A6YYL1 179 aa22.9■■□□□ 1.26
PAPD4-211ENST00000508620 SPATA31A3Q5VYP0 1347 aa22.89■■□□□ 1.26
PAPD4-211ENST00000508620 NUTM2BA6NNL0 878 aaPredicted RBP22.89■■□□□ 1.25
PAPD4-211ENST00000508620 NUTM2EB1AL46 878 aaPredicted RBP22.89■■□□□ 1.25
PAPD4-211ENST00000508620 SLC24A1O60721 1099 aa22.89■■□□□ 1.25
PAPD4-211ENST00000508620 NUTM2AQ8IVF1 878 aaPredicted RBP22.89■■□□□ 1.25
PAPD4-211ENST00000508620 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
PAPD4-211ENST00000508620 SBNO1A3KN83 1393 aa22.88■■□□□ 1.25
PAPD4-211ENST00000508620 ACEP12821 1306 aa22.86■■□□□ 1.25
PAPD4-211ENST00000508620 PPIP5K1Q6PFW1 1433 aa22.86■■□□□ 1.25
PAPD4-211ENST00000508620 USP47Q96K76 1375 aa22.86■■□□□ 1.25
PAPD4-211ENST00000508620 COL22A1Q8NFW1 1626 aaPredicted RBP22.86■■□□□ 1.25
PAPD4-211ENST00000508620 MEX3CQ5U5Q3 659 aaKnown RBP22.85■■□□□ 1.25
PAPD4-211ENST00000508620 TESK2Q96S53 571 aa22.85■■□□□ 1.25
PAPD4-211ENST00000508620 CABP1Q9NZU7 370 aa22.85■■□□□ 1.25
PAPD4-211ENST00000508620 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
PAPD4-211ENST00000508620 LRP6O75581 1613 aa22.84■■□□□ 1.25
PAPD4-211ENST00000508620 TNS3Q68CZ2 1445 aa22.83■■□□□ 1.25
PAPD4-211ENST00000508620 TRPM3Q9HCF6 1732 aaPredicted RBP22.83■■□□□ 1.25
PAPD4-211ENST00000508620 LMOD2Q6P5Q4 547 aa22.83■■□□□ 1.25
PAPD4-211ENST00000508620 PUS7Q96PZ0 661 aaKnown RBP22.82■■□□□ 1.24
PAPD4-211ENST00000508620 ATAD2Q6PL18 1390 aa22.81■■□□□ 1.24
PAPD4-211ENST00000508620 PAK3O75914 559 aaPredicted RBP22.81■■□□□ 1.24
PAPD4-211ENST00000508620 ARHGEF10O15013 1369 aa22.8■■□□□ 1.24
PAPD4-211ENST00000508620 ALS2Q96Q42 1657 aa22.78■■□□□ 1.24
PAPD4-211ENST00000508620 ADAMTS2O95450 1211 aa22.77■■□□□ 1.24
PAPD4-211ENST00000508620 TMF1P82094 1093 aa22.77■■□□□ 1.24
PAPD4-211ENST00000508620 ZNF692Q9BU19 519 aaPredicted RBP22.77■■□□□ 1.24
PAPD4-211ENST00000508620 RGS17Q9UGC6 210 aaPredicted RBP22.77■■□□□ 1.24
PAPD4-211ENST00000508620 EIF4G2P78344 907 aaKnown RBP eCLIP22.75■■□□□ 1.23
PAPD4-211ENST00000508620 BRD4O60885 1362 aaPredicted RBP22.75■■□□□ 1.23
PAPD4-211ENST00000508620 MARF1Q9Y4F3 1742 aaKnown RBP22.74■■□□□ 1.23
PAPD4-211ENST00000508620 AKAP12Q02952 1782 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms