RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 POGKQ9P215 609 aa21.44■■□□□ 1.02
RNF4-210ENST00000508235 ARHGEF28Q8N1W1 1705 aaKnown RBP21.43■■□□□ 1.02
RNF4-210ENST00000508235 NBPF1Q3BBV0 1214 aa21.43■■□□□ 1.02
RNF4-210ENST00000508235 PRAM1Q96QH2 718 aa21.43■■□□□ 1.02
RNF4-210ENST00000508235 CDC42BPGQ6DT37 1551 aa21.43■■□□□ 1.02
RNF4-210ENST00000508235 ROCK2O75116 1388 aaKnown RBP21.42■■□□□ 1.02
RNF4-210ENST00000508235 PLEKHH1Q9ULM0 1364 aa21.42■■□□□ 1.02
RNF4-210ENST00000508235 ROBO1Q9Y6N7 1651 aa21.41■■□□□ 1.02
RNF4-210ENST00000508235 MST1RQ04912 1400 aa21.39■■□□□ 1.02
RNF4-210ENST00000508235 NBPF8Q3BBV2 869 aa21.39■■□□□ 1.01
RNF4-210ENST00000508235 RALGAPBQ86X10 1494 aa21.37■■□□□ 1.01
RNF4-210ENST00000508235 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
RNF4-210ENST00000508235 SAFB2Q14151 953 aaKnown RBP eCLIP21.36■■□□□ 1.01
RNF4-210ENST00000508235 GPRASP1Q5JY77 1395 aa21.36■■□□□ 1.01
RNF4-210ENST00000508235 FMN2Q9NZ56 1722 aa21.35■■□□□ 1.01
RNF4-210ENST00000508235 EIF3AQ14152 1382 aaKnown RBP21.35■■□□□ 1.01
RNF4-210ENST00000508235 C1orf167Q5SNV9 1468 aa21.34■■□□□ 1.01
RNF4-210ENST00000508235 HSPA1LP34931 641 aa21.32■■□□□ 1
RNF4-210ENST00000508235 CARD11Q9BXL7 1154 aa21.32■■□□□ 1
RNF4-210ENST00000508235 BRINP3Q76B58 766 aa21.31■■□□□ 1
RNF4-210ENST00000508235 MINK1Q8N4C8 1332 aaPredicted RBP21.3■■□□□ 1
RNF4-210ENST00000508235 CENPJQ9HC77 1338 aaPredicted RBP21.3■■□□□ 1
RNF4-210ENST00000508235 QRICH2Q9H0J4 1663 aa21.3■■□□□ 1
RNF4-210ENST00000508235 PHLPP1O60346 1717 aa21.29■■□□□ 1
RNF4-210ENST00000508235 HIRIP3Q9BW71 556 aaPredicted RBP21.28■■□□□ 1
RNF4-210ENST00000508235 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
RNF4-210ENST00000508235 ANKARQ7Z5J8 1434 aa21.27■■□□□ 1
RNF4-210ENST00000508235 NHSL1Q5SYE7 1610 aa21.26■□□□□ 0.99
RNF4-210ENST00000508235 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
RNF4-210ENST00000508235 ESCO1Q5FWF5 840 aa21.26■□□□□ 0.99
RNF4-210ENST00000508235 KIF1AQ12756 1690 aa21.25■□□□□ 0.99
RNF4-210ENST00000508235 RGPD8O14715 1765 aaPredicted RBP21.25■□□□□ 0.99
RNF4-210ENST00000508235 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
RNF4-210ENST00000508235 NUTM2FA1L443 756 aa21.24■□□□□ 0.99
RNF4-210ENST00000508235 ORAI2Q96SN7 254 aa21.24■□□□□ 0.99
RNF4-210ENST00000508235 COL16A1Q07092 1604 aaPredicted RBP21.22■□□□□ 0.99
RNF4-210ENST00000508235 ITSN1Q15811 1721 aa21.21■□□□□ 0.99
RNF4-210ENST00000508235 USP32Q8NFA0 1604 aa21.21■□□□□ 0.99
RNF4-210ENST00000508235 CDK19Q9BWU1 502 aa21.2■□□□□ 0.98
RNF4-210ENST00000508235 NPHP3Q7Z494 1330 aa21.2■□□□□ 0.98
RNF4-210ENST00000508235 SBNO2Q9Y2G9 1366 aa21.2■□□□□ 0.98
RNF4-210ENST00000508235 EVC2Q86UK5 1308 aa21.19■□□□□ 0.98
RNF4-210ENST00000508235 SLC24A1O60721 1099 aa21.18■□□□□ 0.98
RNF4-210ENST00000508235 PHF8Q9UPP1 1060 aa21.18■□□□□ 0.98
RNF4-210ENST00000508235 JCADQ9P266 1359 aa21.16■□□□□ 0.98
RNF4-210ENST00000508235 SRPK2P78362 688 aaKnown RBP21.16■□□□□ 0.98
RNF4-210ENST00000508235 LRRC59Q96AG4 307 aaKnown RBP21.16■□□□□ 0.98
RNF4-210ENST00000508235 NUDT16Q96DE0 195 aaKnown RBP21.16■□□□□ 0.98
RNF4-210ENST00000508235 ATP7BP35670 1465 aa21.15■□□□□ 0.98
RNF4-210ENST00000508235 SOS2Q07890 1332 aaPredicted RBP21.15■□□□□ 0.98
RNF4-210ENST00000508235 PRR36Q9H6K5 1346 aa21.15■□□□□ 0.98
RNF4-210ENST00000508235 FOXO3O43524 673 aa21.15■□□□□ 0.98
RNF4-210ENST00000508235 USP47Q96K76 1375 aa21.14■□□□□ 0.98
RNF4-210ENST00000508235 CCDC61Q9Y6R9 512 aa21.14■□□□□ 0.97
RNF4-210ENST00000508235 SHPRHQ149N8 1683 aa21.13■□□□□ 0.97
RNF4-210ENST00000508235 TOPAZ1Q8N9V7 1692 aa21.13■□□□□ 0.97
RNF4-210ENST00000508235 DDX17Q92841 729 aaKnown RBP21.13■□□□□ 0.97
RNF4-210ENST00000508235 ST20-MTHFSA0A0A6YYL1 179 aa21.11■□□□□ 0.97
RNF4-210ENST00000508235 PSME1Q06323 249 aa21.11■□□□□ 0.97
RNF4-210ENST00000508235 PXDNQ92626 1479 aa21.11■□□□□ 0.97
RNF4-210ENST00000508235 PMFBP1Q8TBY8 1022 aa21.1■□□□□ 0.97
RNF4-210ENST00000508235 CABP2Q9NPB3 220 aa21.1■□□□□ 0.97
RNF4-210ENST00000508235 SPATA31A6Q5VVP1 1343 aa21.09■□□□□ 0.97
RNF4-210ENST00000508235 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
RNF4-210ENST00000508235 KRT28Q7Z3Y7 464 aa21.08■□□□□ 0.97
RNF4-210ENST00000508235 NGDNQ8NEJ9 315 aaKnown RBP21.08■□□□□ 0.97
RNF4-210ENST00000508235 PLEKHG3A1L390 1219 aa21.07■□□□□ 0.96
RNF4-210ENST00000508235 PPIP5K1Q6PFW1 1433 aa21.06■□□□□ 0.96
RNF4-210ENST00000508235 XPCQ01831 940 aaPredicted RBP21.06■□□□□ 0.96
RNF4-210ENST00000508235 PUS7Q96PZ0 661 aaKnown RBP21.06■□□□□ 0.96
RNF4-210ENST00000508235 TESK2Q96S53 571 aa21.06■□□□□ 0.96
RNF4-210ENST00000508235 SBNO1A3KN83 1393 aa21.05■□□□□ 0.96
RNF4-210ENST00000508235 MED1Q15648 1581 aaPredicted RBP21.05■□□□□ 0.96
RNF4-210ENST00000508235 EIF4G2P78344 907 aaKnown RBP eCLIP21.04■□□□□ 0.96
RNF4-210ENST00000508235 POLR3AO14802 1390 aaPredicted RBP21.04■□□□□ 0.96
RNF4-210ENST00000508235 PNPLA6Q8IY17 1366 aa21.04■□□□□ 0.96
RNF4-210ENST00000508235 TMF1P82094 1093 aa21.03■□□□□ 0.96
RNF4-210ENST00000508235 COL22A1Q8NFW1 1626 aaPredicted RBP21.03■□□□□ 0.96
RNF4-210ENST00000508235 ACEP12821 1306 aa21.03■□□□□ 0.96
RNF4-210ENST00000508235 SPATA31A3Q5VYP0 1347 aa21.03■□□□□ 0.96
RNF4-210ENST00000508235 CDCA8Q53HL2 280 aa21.02■□□□□ 0.96
RNF4-210ENST00000508235 TNS3Q68CZ2 1445 aa21.02■□□□□ 0.96
RNF4-210ENST00000508235 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
RNF4-210ENST00000508235 CABP1Q9NZU7 370 aa21.01■□□□□ 0.95
RNF4-210ENST00000508235 ARHGEF10O15013 1369 aa21■□□□□ 0.95
RNF4-210ENST00000508235 BRD4O60885 1362 aaPredicted RBP20.99■□□□□ 0.95
RNF4-210ENST00000508235 NINLQ9Y2I6 1382 aa20.97■□□□□ 0.95
RNF4-210ENST00000508235 ALS2Q96Q42 1657 aa20.97■□□□□ 0.95
RNF4-210ENST00000508235 ZNF692Q9BU19 519 aaPredicted RBP20.97■□□□□ 0.95
RNF4-210ENST00000508235 AKAP12Q02952 1782 aa20.97■□□□□ 0.95
RNF4-210ENST00000508235 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
RNF4-210ENST00000508235 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
RNF4-210ENST00000508235 PAK3O75914 559 aaPredicted RBP20.96■□□□□ 0.95
RNF4-210ENST00000508235 LMOD2Q6P5Q4 547 aa20.96■□□□□ 0.95
RNF4-210ENST00000508235 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
RNF4-210ENST00000508235 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
RNF4-210ENST00000508235 MEX3CQ5U5Q3 659 aaKnown RBP20.95■□□□□ 0.94
RNF4-210ENST00000508235 DISP3Q9P2K9 1392 aa20.95■□□□□ 0.94
RNF4-210ENST00000508235 LRP6O75581 1613 aa20.94■□□□□ 0.94
RNF4-210ENST00000508235 TMC1Q8TDI8 760 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms