RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 FAM135BQ49AJ0 1406 aa19.14■□□□□ 0.65
UBE2D3-221ENST00000507845 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
UBE2D3-221ENST00000507845 NALCNQ8IZF0 1738 aa19.12■□□□□ 0.65
UBE2D3-221ENST00000507845 TMEM94Q12767 1356 aa19.12■□□□□ 0.65
UBE2D3-221ENST00000507845 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.11■□□□□ 0.65
UBE2D3-221ENST00000507845 PLEKHH1Q9ULM0 1364 aa19.11■□□□□ 0.65
UBE2D3-221ENST00000507845 C1QBPQ07021 282 aaKnown RBP19.11■□□□□ 0.65
UBE2D3-221ENST00000507845 WAPLQ7Z5K2 1190 aa19.11■□□□□ 0.65
UBE2D3-221ENST00000507845 RBM33Q96EV2 1170 aaKnown RBP19.11■□□□□ 0.65
UBE2D3-221ENST00000507845 NCOA3Q9Y6Q9 1424 aa19.1■□□□□ 0.65
UBE2D3-221ENST00000507845 ZEB1P37275 1124 aaPredicted RBP19.1■□□□□ 0.65
UBE2D3-221ENST00000507845 PRAM1Q96QH2 718 aa19.1■□□□□ 0.65
UBE2D3-221ENST00000507845 QRICH2Q9H0J4 1663 aa19.1■□□□□ 0.65
UBE2D3-221ENST00000507845 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
UBE2D3-221ENST00000507845 POGKQ9P215 609 aa19.07■□□□□ 0.64
UBE2D3-221ENST00000507845 IQSEC2Q5JU85 1478 aa19.07■□□□□ 0.64
UBE2D3-221ENST00000507845 ADGRL3Q9HAR2 1447 aa19.07■□□□□ 0.64
UBE2D3-221ENST00000507845 EIF3AQ14152 1382 aaKnown RBP19.06■□□□□ 0.64
UBE2D3-221ENST00000507845 USP47Q96K76 1375 aa19.06■□□□□ 0.64
UBE2D3-221ENST00000507845 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
UBE2D3-221ENST00000507845 CERKQ8TCT0 537 aa19.05■□□□□ 0.64
UBE2D3-221ENST00000507845 ADGRB2O60241 1585 aa19.05■□□□□ 0.64
UBE2D3-221ENST00000507845 CENPJQ9HC77 1338 aaPredicted RBP19.04■□□□□ 0.64
UBE2D3-221ENST00000507845 C14orf37Q86TY3 774 aa19.03■□□□□ 0.64
UBE2D3-221ENST00000507845 CDC42BPGQ6DT37 1551 aa19.02■□□□□ 0.64
UBE2D3-221ENST00000507845 MSH6P52701 1360 aa19.02■□□□□ 0.64
UBE2D3-221ENST00000507845 C19orf44Q9H6X5 657 aa19.01■□□□□ 0.63
UBE2D3-221ENST00000507845 MINK1Q8N4C8 1332 aaPredicted RBP19■□□□□ 0.63
UBE2D3-221ENST00000507845 DCCP43146 1447 aa19■□□□□ 0.63
UBE2D3-221ENST00000507845 FMN2Q9NZ56 1722 aa19■□□□□ 0.63
UBE2D3-221ENST00000507845 SBNO2Q9Y2G9 1366 aa18.99■□□□□ 0.63
UBE2D3-221ENST00000507845 ST20-MTHFSA0A0A6YYL1 179 aa18.99■□□□□ 0.63
UBE2D3-221ENST00000507845 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
UBE2D3-221ENST00000507845 HIRIP3Q9BW71 556 aaPredicted RBP18.98■□□□□ 0.63
UBE2D3-221ENST00000507845 TULP4Q9NRJ4 1543 aa18.97■□□□□ 0.63
UBE2D3-221ENST00000507845 EIF4G2P78344 907 aaKnown RBP eCLIP18.97■□□□□ 0.63
UBE2D3-221ENST00000507845 RGPD8O14715 1765 aaPredicted RBP18.96■□□□□ 0.63
UBE2D3-221ENST00000507845 HSPA5P11021 654 aaKnown RBP18.96■□□□□ 0.63
UBE2D3-221ENST00000507845 TESK2Q96S53 571 aa18.96■□□□□ 0.63
UBE2D3-221ENST00000507845 ATF3P18847 181 aa18.95■□□□□ 0.62
UBE2D3-221ENST00000507845 CADPS2Q86UW7 1296 aa18.95■□□□□ 0.62
UBE2D3-221ENST00000507845 USP32Q8NFA0 1604 aa18.93■□□□□ 0.62
UBE2D3-221ENST00000507845 MST1RQ04912 1400 aa18.93■□□□□ 0.62
UBE2D3-221ENST00000507845 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
UBE2D3-221ENST00000507845 CDK19Q9BWU1 502 aa18.91■□□□□ 0.62
UBE2D3-221ENST00000507845 ITSN1Q15811 1721 aa18.9■□□□□ 0.62
UBE2D3-221ENST00000507845 EVC2Q86UK5 1308 aa18.9■□□□□ 0.62
UBE2D3-221ENST00000507845 C1orf167Q5SNV9 1468 aa18.9■□□□□ 0.62
UBE2D3-221ENST00000507845 UBAP1LF5GYI3 381 aa18.89■□□□□ 0.61
UBE2D3-221ENST00000507845 TOM1O60784 492 aa18.89■□□□□ 0.61
UBE2D3-221ENST00000507845 SLAIN2Q9P270 581 aa18.89■□□□□ 0.61
UBE2D3-221ENST00000507845 ANKARQ7Z5J8 1434 aa18.89■□□□□ 0.61
UBE2D3-221ENST00000507845 TOPAZ1Q8N9V7 1692 aa18.89■□□□□ 0.61
UBE2D3-221ENST00000507845 NUTM2FA1L443 756 aa18.88■□□□□ 0.61
UBE2D3-221ENST00000507845 SLC24A1O60721 1099 aa18.88■□□□□ 0.61
UBE2D3-221ENST00000507845 ATP7BP35670 1465 aa18.88■□□□□ 0.61
UBE2D3-221ENST00000507845 PRR36Q9H6K5 1346 aa18.87■□□□□ 0.61
UBE2D3-221ENST00000507845 DISP3Q9P2K9 1392 aa18.87■□□□□ 0.61
UBE2D3-221ENST00000507845 ROBO1Q9Y6N7 1651 aa18.86■□□□□ 0.61
UBE2D3-221ENST00000507845 SRPK2P78362 688 aaKnown RBP18.86■□□□□ 0.61
UBE2D3-221ENST00000507845 CABP2Q9NPB3 220 aa18.86■□□□□ 0.61
UBE2D3-221ENST00000507845 TMF1P82094 1093 aa18.85■□□□□ 0.61
UBE2D3-221ENST00000507845 NUDT16Q96DE0 195 aaKnown RBP18.84■□□□□ 0.61
UBE2D3-221ENST00000507845 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
UBE2D3-221ENST00000507845 PUS7Q96PZ0 661 aaKnown RBP18.82■□□□□ 0.6
UBE2D3-221ENST00000507845 ORAI2Q96SN7 254 aa18.82■□□□□ 0.6
UBE2D3-221ENST00000507845 PIP4K2BP78356 416 aa18.81■□□□□ 0.6
UBE2D3-221ENST00000507845 BRINP3Q76B58 766 aa18.81■□□□□ 0.6
UBE2D3-221ENST00000507845 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
UBE2D3-221ENST00000507845 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
UBE2D3-221ENST00000507845 ESCO1Q5FWF5 840 aa18.8■□□□□ 0.6
UBE2D3-221ENST00000507845 CCDC61Q9Y6R9 512 aa18.8■□□□□ 0.6
UBE2D3-221ENST00000507845 MYOM1P52179 1685 aa18.79■□□□□ 0.6
UBE2D3-221ENST00000507845 C11orf95C9JLR9 678 aaPredicted RBP18.79■□□□□ 0.6
UBE2D3-221ENST00000507845 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
UBE2D3-221ENST00000507845 PPIP5K1Q6PFW1 1433 aa18.79■□□□□ 0.6
UBE2D3-221ENST00000507845 PHF8Q9UPP1 1060 aa18.78■□□□□ 0.6
UBE2D3-221ENST00000507845 AKAP12Q02952 1782 aa18.77■□□□□ 0.6
UBE2D3-221ENST00000507845 AHDC1Q5TGY3 1603 aaPredicted RBP18.77■□□□□ 0.6
UBE2D3-221ENST00000507845 PLEKHG3A1L390 1219 aa18.76■□□□□ 0.59
UBE2D3-221ENST00000507845 PHLPP1O60346 1717 aa18.75■□□□□ 0.59
UBE2D3-221ENST00000507845 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
UBE2D3-221ENST00000507845 FBXO41Q8TF61 875 aa18.75■□□□□ 0.59
UBE2D3-221ENST00000507845 CABP1Q9NZU7 370 aa18.75■□□□□ 0.59
UBE2D3-221ENST00000507845 KIF7Q2M1P5 1343 aa18.74■□□□□ 0.59
UBE2D3-221ENST00000507845 POLR3AO14802 1390 aaPredicted RBP18.73■□□□□ 0.59
UBE2D3-221ENST00000507845 NINLQ9Y2I6 1382 aa18.73■□□□□ 0.59
UBE2D3-221ENST00000507845 MON2Q7Z3U7 1717 aa18.72■□□□□ 0.59
UBE2D3-221ENST00000507845 CCDC7Q96M83 1385 aa18.72■□□□□ 0.59
UBE2D3-221ENST00000507845 FOXO3O43524 673 aa18.72■□□□□ 0.59
UBE2D3-221ENST00000507845 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
UBE2D3-221ENST00000507845 DDX17Q92841 729 aaKnown RBP18.72■□□□□ 0.59
UBE2D3-221ENST00000507845 POLR3GLQ9BT43 218 aa18.72■□□□□ 0.59
UBE2D3-221ENST00000507845 SLC12A5Q9H2X9 1139 aa18.72■□□□□ 0.59
UBE2D3-221ENST00000507845 ACEP12821 1306 aa18.72■□□□□ 0.59
UBE2D3-221ENST00000507845 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
UBE2D3-221ENST00000507845 PXDNQ92626 1479 aa18.71■□□□□ 0.59
UBE2D3-221ENST00000507845 CD163L1Q9NR16 1453 aa18.71■□□□□ 0.59
UBE2D3-221ENST00000507845 COL16A1Q07092 1604 aaPredicted RBP18.71■□□□□ 0.59
UBE2D3-221ENST00000507845 NGDNQ8NEJ9 315 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms